Product Details

Primer Sequences

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Primer Chromosome Location

Chr.1: 102888463-102888959 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

COL11A1

Entrez Gene ID

1301

Gene Name

collagen type XI alpha 1 chain

Gene Aliases

CO11A1, COLL6, STL2

UniGene

Hs.523446

Gene Chromosome Location

Chr.1: 102876467-103108580 on Build GRCh38

Transcripts

NM_001190709.1 NM_001854.3 NM_080629.2 NM_080630.3 NR_134980.1 XM_017000334.1 XM_017000335.1 XM_017000337.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
6632324	c.4554+2T>G	p.?	Chr.1: 102888864-102888864 on Build GRCh38
5842904	c.4556G>A	p.G1519D	Chr.1: 102888757-102888757 on Build GRCh38
5842903	c.4555-1G>A	p.?	Chr.1: 102888631-102888631 on Build GRCh38
310203	c.4553C>T	p.T1518I	Chr.1: 102888724-102888724 on Build GRCh38
1953808	c.4569G>A	p.Q1523Q	Chr.1: 102888616-102888616 on Build GRCh38
4549010	c.4628G>A	p.G1543E	Chr.1: 102888593-102888593 on Build GRCh38
1953818	c.4532C>A	p.P1511Q	Chr.1: 102888745-102888745 on Build GRCh38
3975753	c.4561G>T	p.A1521S	Chr.1: 102888624-102888624 on Build GRCh38
6507557	c.4591G>T	p.G1531W	Chr.1: 102888594-102888594 on Build GRCh38
5695848	c.4553C>G	p.T1518S	Chr.1: 102888724-102888724 on Build GRCh38
6057238	c.4537G>T	p.G1513C	Chr.1: 102888740-102888740 on Build GRCh38
3720610	c.4510G>T	p.G1504C	Chr.1: 102888910-102888910 on Build GRCh38
4495373	c.4487C>T	p.P1496L	Chr.1: 102888897-102888897 on Build GRCh38
6120291	c.4556G>T	p.G1519V	Chr.1: 102888629-102888629 on Build GRCh38
5554687	c.4511G>T	p.G1504V	Chr.1: 102888873-102888873 on Build GRCh38
6850043	c.4573G>A	p.G1525S	Chr.1: 102888740-102888740 on Build GRCh38
3720611	c.4474G>T	p.G1492C	Chr.1: 102888910-102888910 on Build GRCh38
5176750	c.4557A>G	p.G1519G	Chr.1: 102888628-102888628 on Build GRCh38
358172	c.4574G>T	p.G1525V	Chr.1: 102888739-102888739 on Build GRCh38
4549011	c.4592G>A	p.G1531E	Chr.1: 102888593-102888593 on Build GRCh38
6009389	c.4582G>T	p.G1528C	Chr.1: 102888731-102888731 on Build GRCh38
4019966	c.4566C>T	p.G1522G	Chr.1: 102888747-102888747 on Build GRCh38
6632325	c.4518+2T>G	p.?	Chr.1: 102888864-102888864 on Build GRCh38
7250978	c.4567C>T	p.Q1523*	Chr.1: 102888618-102888618 on Build GRCh38
6009392	c.4465G>A	p.G1489R	Chr.1: 102888919-102888919 on Build GRCh38
1600433	c.4591-3C>T	p.?	Chr.1: 102888633-102888633 on Build GRCh38
4603811	c.4526delT	p.L1509fs*1	Chr.1: 102888894-102888894 on Build GRCh38
6850044	c.4537G>A	p.G1513S	Chr.1: 102888740-102888740 on Build GRCh38
5561661	c.4596T>A	p.P1532P	Chr.1: 102888589-102888589 on Build GRCh38
310202	c.4589C>T	p.T1530I	Chr.1: 102888724-102888724 on Build GRCh38
4019967	c.4530C>T	p.G1510G	Chr.1: 102888747-102888747 on Build GRCh38
6120290	c.4592G>T	p.G1531V	Chr.1: 102888629-102888629 on Build GRCh38
1953817	c.4568C>A	p.P1523Q	Chr.1: 102888745-102888745 on Build GRCh38
4408891	c.4521T>G	p.G1507G	Chr.1: 102888756-102888756 on Build GRCh38
3975754	c.4513C>A	p.P1505T	Chr.1: 102888907-102888907 on Build GRCh38
5502283	c.4608+1G>A	p.?	Chr.1: 102888576-102888576 on Build GRCh38
1688147	c.4466G>A	p.G1489E	Chr.1: 102888918-102888918 on Build GRCh38
5377060	c.4540C>T	p.P1514S	Chr.1: 102888880-102888880 on Build GRCh38
4495372	c.4523C>T	p.P1508L	Chr.1: 102888897-102888897 on Build GRCh38
6057237	c.4573G>T	p.G1525C	Chr.1: 102888740-102888740 on Build GRCh38
1600434	c.4555-3C>T	p.?	Chr.1: 102888633-102888633 on Build GRCh38
4140717	c.4555-7T>A	p.?	Chr.1: 102888765-102888765 on Build GRCh38
1332121	c.4542C>T	p.N1514N	Chr.1: 102888735-102888735 on Build GRCh38
6507556	c.4627G>T	p.G1543W	Chr.1: 102888594-102888594 on Build GRCh38
5502282	c.4644+1G>A	p.?	Chr.1: 102888576-102888576 on Build GRCh38
226454	c.4624C>T	p.P1542S	Chr.1: 102888597-102888597 on Build GRCh38
3360177	c.4592G>A	p.G1531E	Chr.1: 102888629-102888629 on Build GRCh38
1953807	c.4605G>A	p.Q1535Q	Chr.1: 102888616-102888616 on Build GRCh38
4140718	c.4519-7T>A	p.?	Chr.1: 102888765-102888765 on Build GRCh38
4548859	c.4591G>A	p.G1531R	Chr.1: 102888630-102888630 on Build GRCh38
5842902	c.4591-1G>A	p.?	Chr.1: 102888631-102888631 on Build GRCh38
5842905	c.4520G>A	p.G1507D	Chr.1: 102888757-102888757 on Build GRCh38
1953810	c.4564G>T	p.G1522C	Chr.1: 102888621-102888621 on Build GRCh38
4495855	c.4585C>T	p.L1529F	Chr.1: 102888600-102888600 on Build GRCh38
1165676	c.4538G>A	p.G1513D	Chr.1: 102888739-102888739 on Build GRCh38
6420520	c.4616G>C	p.S1539T	Chr.1: 102888605-102888605 on Build GRCh38
5438333	c.4603T>C	p.S1535P	Chr.1: 102888582-102888582 on Build GRCh38
4548860	c.4555G>A	p.G1519R	Chr.1: 102888630-102888630 on Build GRCh38
6009391	c.4501G>A	p.G1501R	Chr.1: 102888919-102888919 on Build GRCh38
893105	c.4523C>T	p.P1508L	Chr.1: 102888754-102888754 on Build GRCh38
5561660	c.4632T>A	p.P1544P	Chr.1: 102888589-102888589 on Build GRCh38
423330	c.4548T>C	p.G1516G	Chr.1: 102888872-102888872 on Build GRCh38
5554686	c.4547G>T	p.G1516V	Chr.1: 102888873-102888873 on Build GRCh38
3975755	c.4477C>A	p.P1493T	Chr.1: 102888907-102888907 on Build GRCh38
5438332	c.4639T>C	p.S1547P	Chr.1: 102888582-102888582 on Build GRCh38
7250979	c.4603C>T	p.Q1535*	Chr.1: 102888618-102888618 on Build GRCh38
3360178	c.4556G>A	p.G1519E	Chr.1: 102888629-102888629 on Build GRCh38
4408890	c.4557T>G	p.G1519G	Chr.1: 102888756-102888756 on Build GRCh38
4950077	c.4588C>T	p.P1530S	Chr.1: 102888597-102888597 on Build GRCh38
893104	c.4559C>T	p.P1520L	Chr.1: 102888754-102888754 on Build GRCh38
1600431	c.4595C>T	p.P1532L	Chr.1: 102888626-102888626 on Build GRCh38
1688146	c.4502G>A	p.G1501E	Chr.1: 102888918-102888918 on Build GRCh38
6009390	c.4546G>T	p.G1516C	Chr.1: 102888731-102888731 on Build GRCh38
6420521	c.4580G>C	p.S1527T	Chr.1: 102888605-102888605 on Build GRCh38
423331	c.4512T>C	p.G1504G	Chr.1: 102888872-102888872 on Build GRCh38
4603812	c.4490delT	p.L1497fs*1	Chr.1: 102888894-102888894 on Build GRCh38
1953809	c.4600G>T	p.G1534C	Chr.1: 102888621-102888621 on Build GRCh38
5377061	c.4504C>T	p.P1502S	Chr.1: 102888880-102888880 on Build GRCh38
3975752	c.4597G>T	p.A1533S	Chr.1: 102888624-102888624 on Build GRCh38
5695847	c.4589C>G	p.T1530S	Chr.1: 102888724-102888724 on Build GRCh38
4495854	c.4621C>T	p.L1541F	Chr.1: 102888600-102888600 on Build GRCh38
1165675	c.4574G>A	p.G1525D	Chr.1: 102888739-102888739 on Build GRCh38
358173	c.4538G>T	p.G1513V	Chr.1: 102888739-102888739 on Build GRCh38
1600432	c.4559C>T	p.P1520L	Chr.1: 102888626-102888626 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs886044244	Chr.1: 102888722-102888722 on Build GRCh38
rs747888494	Chr.1: 102888850-102888850 on Build GRCh38
rs775453485	Chr.1: 102888858-102888859 on Build GRCh38
rs778700431	Chr.1: 102888846-102888846 on Build GRCh38
rs749200216	Chr.1: 102888826-102888826 on Build GRCh38
rs937559629	Chr.1: 102888708-102888708 on Build GRCh38
rs1003410768	Chr.1: 102888485-102888485 on Build GRCh38
rs1014638856	Chr.1: 102888845-102888845 on Build GRCh38
rs745798375	Chr.1: 102888606-102888606 on Build GRCh38
rs763336669	Chr.1: 102888772-102888772 on Build GRCh38
rs760592267	Chr.1: 102888922-102888923 on Build GRCh38
rs769726607	Chr.1: 102888533-102888533 on Build GRCh38
rs959801277	Chr.1: 102888503-102888503 on Build GRCh38
rs747193455	Chr.1: 102888690-102888690 on Build GRCh38
rs886970938	Chr.1: 102888793-102888793 on Build GRCh38
rs774846193	Chr.1: 102888907-102888907 on Build GRCh38
rs372206712	Chr.1: 102888715-102888715 on Build GRCh38
rs199952288	Chr.1: 102888889-102888889 on Build GRCh38
rs199597559	Chr.1: 102888543-102888543 on Build GRCh38
rs754845645	Chr.1: 102888842-102888842 on Build GRCh38
rs759403953	Chr.1: 102888849-102888849 on Build GRCh38
rs750007692	Chr.1: 102888801-102888801 on Build GRCh38
rs775358668	Chr.1: 102888536-102888536 on Build GRCh38
rs199882962	Chr.1: 102888556-102888556 on Build GRCh38
rs578137786	Chr.1: 102888599-102888599 on Build GRCh38
rs951153940	Chr.1: 102888510-102888510 on Build GRCh38
rs946274863	Chr.1: 102888669-102888669 on Build GRCh38
rs200793857	Chr.1: 102888704-102888704 on Build GRCh38
rs749149323	Chr.1: 102888660-102888660 on Build GRCh38
rs756869175	Chr.1: 102888794-102888794 on Build GRCh38
rs770918141	Chr.1: 102888696-102888696 on Build GRCh38
rs767267442	Chr.1: 102888857-102888858 on Build GRCh38
rs764371952	Chr.1: 102888903-102888903 on Build GRCh38
rs755666450	Chr.1: 102888803-102888803 on Build GRCh38
rs1056202350	Chr.1: 102888787-102888787 on Build GRCh38
rs772483529	Chr.1: 102888541-102888541 on Build GRCh38
rs1763347	Chr.1: 102888872-102888872 on Build GRCh38
rs997136139	Chr.1: 102888919-102888919 on Build GRCh38
rs751186318	Chr.1: 102888774-102888774 on Build GRCh38
rs201561225	Chr.1: 102888564-102888564 on Build GRCh38
rs779536838	Chr.1: 102888868-102888868 on Build GRCh38
rs1676486	Chr.1: 102888582-102888582 on Build GRCh38
rs528529875	Chr.1: 102888876-102888876 on Build GRCh38
rs146997967	Chr.1: 102888604-102888604 on Build GRCh38
rs1014780637	Chr.1: 102888507-102888507 on Build GRCh38
rs1034858613	Chr.1: 102888498-102888498 on Build GRCh38
rs140954784	Chr.1: 102888591-102888591 on Build GRCh38
rs145901197	Chr.1: 102888916-102888916 on Build GRCh38
rs750016803	Chr.1: 102888924-102888924 on Build GRCh38
rs780185069	Chr.1: 102888816-102888816 on Build GRCh38
rs17127203	Chr.1: 102888559-102888559 on Build GRCh38
rs767072784	Chr.1: 102888796-102888796 on Build GRCh38
rs897560173	Chr.1: 102888856-102888856 on Build GRCh38
rs762071331	Chr.1: 102888913-102888913 on Build GRCh38
rs542653794	Chr.1: 102888767-102888767 on Build GRCh38
rs768543378	Chr.1: 102888672-102888672 on Build GRCh38
rs373610359	Chr.1: 102888537-102888537 on Build GRCh38
rs1014023368	Chr.1: 102888814-102888814 on Build GRCh38
rs985981498	Chr.1: 102888935-102888935 on Build GRCh38
rs994706812	Chr.1: 102888867-102888867 on Build GRCh38
rs545281542	Chr.1: 102888689-102888689 on Build GRCh38
rs769920499	Chr.1: 102888624-102888624 on Build GRCh38
rs867582735	Chr.1: 102888929-102888929 on Build GRCh38
rs575231157	Chr.1: 102888732-102888732 on Build GRCh38
rs763393905	Chr.1: 102888899-102888899 on Build GRCh38
rs370574925	Chr.1: 102888613-102888613 on Build GRCh38
rs913393153	Chr.1: 102888663-102888663 on Build GRCh38
rs375198724	Chr.1: 102888686-102888686 on Build GRCh38
rs755033653	Chr.1: 102888646-102888646 on Build GRCh38
rs139064549	Chr.1: 102888579-102888579 on Build GRCh38
rs760018604	Chr.1: 102888570-102888570 on Build GRCh38
rs775945644	Chr.1: 102888747-102888747 on Build GRCh38
rs986809598	Chr.1: 102888583-102888583 on Build GRCh38
rs764392474	Chr.1: 102888773-102888773 on Build GRCh38
rs780129997	Chr.1: 102888625-102888625 on Build GRCh38
rs369145108	Chr.1: 102888691-102888691 on Build GRCh38

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