Product Details

Primer Sequences

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Primer Chromosome Location

Chr.1: 230767436-230767843 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

CAPN9

Entrez Gene ID

10753

Gene Name

calpain 9

Gene Aliases

GC36, nCL-4

UniGene

Hs.498021

Gene Chromosome Location

Chr.1: 230747289-230803356 on Build GRCh38

Transcripts

NM_001319676.1 NM_006615.2 NM_016452.2 XM_011544017.1 XM_011544018.1 XM_011544019.2 XM_011544020.1 XM_017000098.1 XM_017000099.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
5380041	c.699C>T	p.F233F	Chr.1: 230767703-230767703 on Build GRCh38
3710639	c.565G>T	p.G189*	Chr.1: 230767569-230767569 on Build GRCh38
1626888	c.657T>G	p.I219M	Chr.1: 230767661-230767661 on Build GRCh38
1146224	c.561G>A	p.L187L	Chr.1: 230767565-230767565 on Build GRCh38
3485018	c.588G>A	p.M196I	Chr.1: 230767592-230767592 on Build GRCh38
5380042	c.699C>T	p.F233F	Chr.1: 230767703-230767703 on Build GRCh38
5911242	c.565G>A	p.G189R	Chr.1: 230767569-230767569 on Build GRCh38
4455084	c.662A>T	p.E221V	Chr.1: 230767666-230767666 on Build GRCh38
4455085	c.662A>T	p.E221V	Chr.1: 230767666-230767666 on Build GRCh38
3485017	c.588G>A	p.M196I	Chr.1: 230767592-230767592 on Build GRCh38
1582917	c.701T>C	p.I234T	Chr.1: 230767705-230767705 on Build GRCh38
1295985	c.658C>T	p.L220L	Chr.1: 230767662-230767662 on Build GRCh38
905389	c.574G>A	p.A192T	Chr.1: 230767578-230767578 on Build GRCh38
905388	c.573C>T	p.S191S	Chr.1: 230767577-230767577 on Build GRCh38
5528131	c.559C>T	p.L187L	Chr.1: 230767563-230767563 on Build GRCh38
6265637	c.605G>T	p.G202V	Chr.1: 230767609-230767609 on Build GRCh38
679124	c.561G>A	p.L187L	Chr.1: 230767565-230767565 on Build GRCh38
1626887	c.657T>G	p.I219M	Chr.1: 230767661-230767661 on Build GRCh38
1660976	c.668C>A	p.A223D	Chr.1: 230767672-230767672 on Build GRCh38
3710640	c.565G>T	p.G189*	Chr.1: 230767569-230767569 on Build GRCh38
1660975	c.668C>A	p.A223D	Chr.1: 230767672-230767672 on Build GRCh38
5812345	c.657T>A	p.I219I	Chr.1: 230767661-230767661 on Build GRCh38
4898133	c.589G>A	p.E197K	Chr.1: 230767593-230767593 on Build GRCh38
1295986	c.658C>T	p.L220L	Chr.1: 230767662-230767662 on Build GRCh38
4823883	c.613G>A	p.E205K	Chr.1: 230767617-230767617 on Build GRCh38
7147642	c.652G>C	p.E218Q	Chr.1: 230767656-230767656 on Build GRCh38
1582916	c.701T>C	p.I234T	Chr.1: 230767705-230767705 on Build GRCh38
7087779	c.677G>C	p.R226T	Chr.1: 230767681-230767681 on Build GRCh38
4823884	c.613G>A	p.E205K	Chr.1: 230767617-230767617 on Build GRCh38
1997987	c.545G>A	p.G182E	Chr.1: 230767549-230767549 on Build GRCh38
5528130	c.559C>T	p.L187L	Chr.1: 230767563-230767563 on Build GRCh38
1997986	c.545G>A	p.G182E	Chr.1: 230767549-230767549 on Build GRCh38
6265636	c.605G>T	p.G202V	Chr.1: 230767609-230767609 on Build GRCh38
1584228	c.574G>A	p.A192T	Chr.1: 230767578-230767578 on Build GRCh38
5898081	c.640G>A	p.E214K	Chr.1: 230767644-230767644 on Build GRCh38
1584229	c.573C>T	p.S191S	Chr.1: 230767577-230767577 on Build GRCh38
5911243	c.565G>A	p.G189R	Chr.1: 230767569-230767569 on Build GRCh38
4029392	c.579C>T	p.I193I	Chr.1: 230767583-230767583 on Build GRCh38
7147641	c.652G>C	p.E218Q	Chr.1: 230767656-230767656 on Build GRCh38
5898082	c.640G>A	p.E214K	Chr.1: 230767644-230767644 on Build GRCh38
7087778	c.677G>C	p.R226T	Chr.1: 230767681-230767681 on Build GRCh38
4029391	c.579C>T	p.I193I	Chr.1: 230767583-230767583 on Build GRCh38
5812344	c.657T>A	p.I219I	Chr.1: 230767661-230767661 on Build GRCh38
3997331	c.600T>C	p.T200T	Chr.1: 230767604-230767604 on Build GRCh38
4898132	c.589G>A	p.E197K	Chr.1: 230767593-230767593 on Build GRCh38
3997330	c.600T>C	p.T200T	Chr.1: 230767604-230767604 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs766970963	Chr.1: 230767613-230767613 on Build GRCh38
rs765102262	Chr.1: 230767586-230767586 on Build GRCh38
rs946470316	Chr.1: 230767480-230767480 on Build GRCh38
rs1012217126	Chr.1: 230767589-230767589 on Build GRCh38
rs60100843	Chr.1: 230767667-230767667 on Build GRCh38
rs757044891	Chr.1: 230767654-230767654 on Build GRCh38
rs763721514	Chr.1: 230767643-230767643 on Build GRCh38
rs372361365	Chr.1: 230767583-230767583 on Build GRCh38
rs370962935	Chr.1: 230767515-230767516 on Build GRCh38
rs370440769	Chr.1: 230767762-230767762 on Build GRCh38
rs11579577	Chr.1: 230767487-230767487 on Build GRCh38
rs200639798	Chr.1: 230767510-230767511 on Build GRCh38
rs865913369	Chr.1: 230767516-230767516 on Build GRCh38
rs148953435	Chr.1: 230767596-230767596 on Build GRCh38
rs771580006	Chr.1: 230767731-230767731 on Build GRCh38
rs751244678	Chr.1: 230767593-230767593 on Build GRCh38
rs1012966495	Chr.1: 230767530-230767530 on Build GRCh38
rs879133780	Chr.1: 230767795-230767795 on Build GRCh38
rs936214239	Chr.1: 230767787-230767787 on Build GRCh38
rs777474196	Chr.1: 230767523-230767523 on Build GRCh38
rs558264332	Chr.1: 230767749-230767750 on Build GRCh38
rs568824112	Chr.1: 230767462-230767462 on Build GRCh38
rs149766737	Chr.1: 230767577-230767577 on Build GRCh38
rs560253000	Chr.1: 230767793-230767793 on Build GRCh38
rs909510246	Chr.1: 230767665-230767665 on Build GRCh38
rs760259417	Chr.1: 230767640-230767640 on Build GRCh38
rs911803618	Chr.1: 230767710-230767710 on Build GRCh38
rs1039862957	Chr.1: 230767473-230767473 on Build GRCh38
rs369955125	Chr.1: 230767720-230767720 on Build GRCh38
rs556429467	Chr.1: 230767587-230767587 on Build GRCh38
rs773742359	Chr.1: 230767608-230767608 on Build GRCh38
rs1025761017	Chr.1: 230767672-230767672 on Build GRCh38
rs527480684	Chr.1: 230767466-230767466 on Build GRCh38
rs962765916	Chr.1: 230767609-230767609 on Build GRCh38
rs780217323	Chr.1: 230767669-230767669 on Build GRCh38
rs553903946	Chr.1: 230767550-230767550 on Build GRCh38
rs755310866	Chr.1: 230767693-230767693 on Build GRCh38
rs781562865	Chr.1: 230767695-230767695 on Build GRCh38
rs372367329	Chr.1: 230767722-230767722 on Build GRCh38
rs536743386	Chr.1: 230767578-230767578 on Build GRCh38
rs11122590	Chr.1: 230767488-230767488 on Build GRCh38
rs776322706	Chr.1: 230767757-230767757 on Build GRCh38
rs747249590	Chr.1: 230767683-230767683 on Build GRCh38
rs914926123	Chr.1: 230767751-230767751 on Build GRCh38
rs368899138	Chr.1: 230767760-230767760 on Build GRCh38
rs531252850	Chr.1: 230767484-230767484 on Build GRCh38
rs3828127	Chr.1: 230767749-230767749 on Build GRCh38
rs559006925	Chr.1: 230767737-230767737 on Build GRCh38
rs924787416	Chr.1: 230767782-230767782 on Build GRCh38
rs1003354168	Chr.1: 230767599-230767599 on Build GRCh38
rs763777063	Chr.1: 230767748-230767748 on Build GRCh38
rs771569749	Chr.1: 230767510-230767516 on Build GRCh38
rs879641566	Chr.1: 230767487-230767488 on Build GRCh38
rs760171267	Chr.1: 230767738-230767738 on Build GRCh38
rs3828126	Chr.1: 230767604-230767604 on Build GRCh38
rs115285515	Chr.1: 230767525-230767525 on Build GRCh38
rs386640213	Chr.1: 230767487-230767488 on Build GRCh38
rs199946717	Chr.1: 230767552-230767552 on Build GRCh38
rs752347458	Chr.1: 230767639-230767639 on Build GRCh38
rs760299883	Chr.1: 230767730-230767761 on Build GRCh38
rs754842123	Chr.1: 230767499-230767499 on Build GRCh38
rs28359644	Chr.1: 230767705-230767705 on Build GRCh38
rs775043847	Chr.1: 230767576-230767576 on Build GRCh38
rs758439855	Chr.1: 230767663-230767663 on Build GRCh38
rs950560110	Chr.1: 230767687-230767687 on Build GRCh38
rs375577407	Chr.1: 230767644-230767644 on Build GRCh38
rs147002278	Chr.1: 230767662-230767662 on Build GRCh38
rs893522422	Chr.1: 230767471-230767471 on Build GRCh38
rs759021638	Chr.1: 230767611-230767611 on Build GRCh38
rs946439210	Chr.1: 230767775-230767775 on Build GRCh38
rs984018565	Chr.1: 230767656-230767656 on Build GRCh38
rs1042103194	Chr.1: 230767820-230767820 on Build GRCh38
rs755931030	Chr.1: 230767515-230767515 on Build GRCh38
rs748504285	Chr.1: 230767703-230767703 on Build GRCh38

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