Product Details

Primer Sequences
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Primer Chromosome Location
Chr.16: 10904639-10905037 on Build GRCh38
Format
Each primer will be delivered in a single tube, dried-down
Quick Reference Guide
Primer Designer™ Tool Quick Reference
Ampliseq ID's

Gene Details

Gene Symbol
CIITA
Entrez Gene ID
4261
Gene Name
class II, major histocompatibility complex, transactivator
Gene Aliases
C2TA, CIITAIV, MHC2TA, NLRA
UniGene
Hs.592051
Gene Chromosome Location
Chr.16: 10866208-10941562 on Build GRCh38
Transcripts
NM_000246.3 NM_001286402.1 NM_001286403.1 NR_104444.1 XM_006720880.3 XM_011522484.2 XM_011522485.2 XM_011522486.2 XM_011522487.2 XM_011522488.2 XM_011522489.2 XM_011522490.2 XM_011522491.2 XM_011522492.2 XM_011522493.2 XM_011522494.2 XM_011522495.2 XM_011522496.2

Cosmic Detail

Cosmic ID Mutation AA Transcript Location
5808648 c.981C>A p.V327V Chr.16: 10904787-10904787 on Build GRCh38
4058150 c.939G>A p.E313E Chr.16: 10904745-10904745 on Build GRCh38
966943 c.948G>A p.T316T Chr.16: 10904754-10904754 on Build GRCh38
4513977 c.957C>T p.T319T Chr.16: 10904763-10904763 on Build GRCh38
1640387 c.950delC p.T319fs*42 Chr.16: 10904756-10904756 on Build GRCh38
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SNP Detail

SNP ID Chromosome Location
rs1051793209 Chr.16: 10904680-10904680 on Build GRCh38
rs747101944 Chr.16: 10904768-10904768 on Build GRCh38
rs373838685 Chr.16: 10904862-10904862 on Build GRCh38
rs372955341 Chr.16: 10904858-10904858 on Build GRCh38
rs760125920 Chr.16: 10904782-10904782 on Build GRCh38
rs866136895 Chr.16: 10904875-10904875 on Build GRCh38
rs760208683 Chr.16: 10904732-10904732 on Build GRCh38
rs914036394 Chr.16: 10904938-10904938 on Build GRCh38
rs369971838 Chr.16: 10904754-10904754 on Build GRCh38
rs78701268 Chr.16: 10904909-10904909 on Build GRCh38
rs775466036 Chr.16: 10904780-10904780 on Build GRCh38
rs142970916 Chr.16: 10904793-10904793 on Build GRCh38
rs890437555 Chr.16: 10904684-10904684 on Build GRCh38
rs764688829 Chr.16: 10904821-10904821 on Build GRCh38
rs899763498 Chr.16: 10905004-10905004 on Build GRCh38
rs116253192 Chr.16: 10904756-10904756 on Build GRCh38
rs780590894 Chr.16: 10904757-10904757 on Build GRCh38
rs151070223 Chr.16: 10904937-10904944 on Build GRCh38
rs980367583 Chr.16: 10904815-10904815 on Build GRCh38
rs886784872 Chr.16: 10904707-10904707 on Build GRCh38
rs1038288481 Chr.16: 10905011-10905011 on Build GRCh38
rs774440362 Chr.16: 10904712-10904712 on Build GRCh38
rs367901429 Chr.16: 10904722-10904722 on Build GRCh38
rs774352830 Chr.16: 10904776-10904776 on Build GRCh38
rs546468569 Chr.16: 10905002-10905002 on Build GRCh38
rs200975989 Chr.16: 10904700-10904700 on Build GRCh38
rs770851587 Chr.16: 10904772-10904772 on Build GRCh38
rs368964652 Chr.16: 10904824-10904824 on Build GRCh38
rs759478896 Chr.16: 10904719-10904719 on Build GRCh38
rs45545642 Chr.16: 10905000-10905000 on Build GRCh38
rs750837573 Chr.16: 10904806-10904806 on Build GRCh38
rs931194224 Chr.16: 10905010-10905010 on Build GRCh38
rs187355811 Chr.16: 10904852-10904852 on Build GRCh38
rs112587174 Chr.16: 10904957-10904957 on Build GRCh38
rs538473746 Chr.16: 10904823-10904823 on Build GRCh38
rs781086659 Chr.16: 10904940-10904940 on Build GRCh38
rs1008170740 Chr.16: 10904800-10904800 on Build GRCh38
rs1033902349 Chr.16: 10904837-10904837 on Build GRCh38
rs764858917 Chr.16: 10904803-10904803 on Build GRCh38
rs761522298 Chr.16: 10904789-10904789 on Build GRCh38
rs759389220 Chr.16: 10904777-10904777 on Build GRCh38
rs78446846 Chr.16: 10904688-10904688 on Build GRCh38
rs758762166 Chr.16: 10904808-10904808 on Build GRCh38
rs192202862 Chr.16: 10904936-10904936 on Build GRCh38
rs568372442 Chr.16: 10904729-10904729 on Build GRCh38
rs531606765 Chr.16: 10904678-10904678 on Build GRCh38
rs780459749 Chr.16: 10904809-10904809 on Build GRCh38
rs370538068 Chr.16: 10904861-10904861 on Build GRCh38
rs757632931 Chr.16: 10904753-10904753 on Build GRCh38
rs766223595 Chr.16: 10904701-10904701 on Build GRCh38
rs183424522 Chr.16: 10904672-10904672 on Build GRCh38
rs760596847 Chr.16: 10904859-10904859 on Build GRCh38
rs995346256 Chr.16: 10904705-10904705 on Build GRCh38
rs74806537 Chr.16: 10904771-10904771 on Build GRCh38
rs943352473 Chr.16: 10904981-10904981 on Build GRCh38
rs898296262 Chr.16: 10904760-10904760 on Build GRCh38
rs778118781 Chr.16: 10904846-10904846 on Build GRCh38
rs771952314 Chr.16: 10904778-10904778 on Build GRCh38
rs943969087 Chr.16: 10904692-10904692 on Build GRCh38
rs554499471 Chr.16: 10904905-10904905 on Build GRCh38
rs868215577 Chr.16: 10904759-10904759 on Build GRCh38
rs768812733 Chr.16: 10904693-10904693 on Build GRCh38
rs781290238 Chr.16: 10904769-10904769 on Build GRCh38
rs534252989 Chr.16: 10904740-10904740 on Build GRCh38
rs1031604789 Chr.16: 10904802-10904802 on Build GRCh38
rs770197581 Chr.16: 10904840-10904840 on Build GRCh38
rs148597952 Chr.16: 10904785-10904785 on Build GRCh38
rs748232897 Chr.16: 10904835-10904835 on Build GRCh38
rs926379706 Chr.16: 10904889-10904889 on Build GRCh38
rs575534388 Chr.16: 10904847-10904847 on Build GRCh38
rs560321398 Chr.16: 10904972-10904972 on Build GRCh38
rs776877669 Chr.16: 10904694-10904694 on Build GRCh38

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