Product Details

Primer Sequences

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Primer Chromosome Location

Chr.14: 37591275-37591548 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

FOXA1

Entrez Gene ID

3169

Gene Name

forkhead box A1

Gene Aliases

HNF3A, TCF3A

UniGene

Hs.163484

Gene Chromosome Location

Chr.14: 37589552-37595120 on Build GRCh38

Transcripts

NM_004496.3 XM_017021246.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
6666041	c.1293T>C	p.S431S	Chr.14: 37591491-37591491 on Build GRCh38
4685294	c.1302C>T	p.P434P	Chr.14: 37591482-37591482 on Build GRCh38
6983377	c.1415C>T	p.S472F	Chr.14: 37591369-37591369 on Build GRCh38
6666038	c.1363C>A	p.L455M	Chr.14: 37591421-37591421 on Build GRCh38
1734398	c.1268C>T	p.A423V	Chr.14: 37591516-37591516 on Build GRCh38
6962147	c.1415_1418CCTA>TCTT	p.S472_*473>FL	Chr.14: 37591366-37591369 on Build GRCh38
6975215	c.1324G>T	p.A442S	Chr.14: 37591460-37591460 on Build GRCh38
7345601	c.1402_1412del11	p.V468fs*>2	Chr.14: 37591372-37591382 on Build GRCh38
7345602	c.1287delC	p.Y429fs*1	Chr.14: 37591497-37591497 on Build GRCh38
6975005	c.1346C>T	p.P449L	Chr.14: 37591438-37591438 on Build GRCh38
236739	c.1358_1359insGG	p.A454fs*17	Chr.14: 37591425-37591426 on Build GRCh38
7113229	c.1416delC	p.*473fs?	Chr.14: 37591368-37591368 on Build GRCh38
6964137	c.1385G>C	p.G462A	Chr.14: 37591399-37591399 on Build GRCh38
7331434	c.1390_1391insGT	p.Y464fs*7	Chr.14: 37591393-37591394 on Build GRCh38
5019393	c.1343G>A	p.S448N	Chr.14: 37591441-37591441 on Build GRCh38
3401300	c.1354C>G	p.P452A	Chr.14: 37591430-37591430 on Build GRCh38
3401301	c.1320C>T	p.G440G	Chr.14: 37591464-37591464 on Build GRCh38
1285033	c.1328C>T	p.S443L	Chr.14: 37591456-37591456 on Build GRCh38
1285034	c.1416C>G	p.S472S	Chr.14: 37591368-37591368 on Build GRCh38
4957797	c.1360G>A	p.A454T	Chr.14: 37591424-37591424 on Build GRCh38
7307644	c.1344C>T	p.S448S	Chr.14: 37591440-37591440 on Build GRCh38
4990679	c.1323C>T	p.S441S	Chr.14: 37591461-37591461 on Build GRCh38
1128259	c.1417T>G	p.*473E	Chr.14: 37591367-37591367 on Build GRCh38
5990903	c.1356_1370del15	p.S453_P457delSALEP	Chr.14: 37591414-37591428 on Build GRCh38
3733722	c.1319G>T	p.G440V	Chr.14: 37591465-37591465 on Build GRCh38
6575993	c.1286A>G	p.Y429C	Chr.14: 37591498-37591498 on Build GRCh38
6981488	c.1300C>T	p.P434S	Chr.14: 37591484-37591484 on Build GRCh38
3671906	c.1287C>T	p.Y429Y	Chr.14: 37591497-37591497 on Build GRCh38
6943007	c.1337C>T	p.T446I	Chr.14: 37591447-37591447 on Build GRCh38
6208505	c.1290C>T	p.G430G	Chr.14: 37591494-37591494 on Build GRCh38
6930100	c.1295C>T	p.T432M	Chr.14: 37591489-37591489 on Build GRCh38
6215129	c.1290C>G	p.G430G	Chr.14: 37591494-37591494 on Build GRCh38
6965462	c.1310T>A	p.L437Q	Chr.14: 37591474-37591474 on Build GRCh38
6140616	c.1362C>T	p.A454A	Chr.14: 37591422-37591422 on Build GRCh38
6958324	c.1371_1395del25	p.A458fs*4	Chr.14: 37591389-37591413 on Build GRCh38
6965469	c.1289_1296delGCTCTACG	p.G430fs*>41	Chr.14: 37591488-37591495 on Build GRCh38
6538081	c.1329G>C	p.S443S	Chr.14: 37591455-37591455 on Build GRCh38
1477551	c.1241_1242insA	p.L415fs*>59	Chr.14: 37591542-37591543 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs774156543	Chr.14: 37591511-37591511 on Build GRCh38
rs780579934	Chr.14: 37591481-37591481 on Build GRCh38
rs752035534	Chr.14: 37591464-37591464 on Build GRCh38
rs920525981	Chr.14: 37591478-37591478 on Build GRCh38
rs780538350	Chr.14: 37591329-37591329 on Build GRCh38
rs760849516	Chr.14: 37591417-37591417 on Build GRCh38
rs765380828	Chr.14: 37591449-37591449 on Build GRCh38
rs766907954	Chr.14: 37591463-37591463 on Build GRCh38
rs764112817	Chr.14: 37591433-37591433 on Build GRCh38
rs990956184	Chr.14: 37591383-37591383 on Build GRCh38
rs755462256	Chr.14: 37591474-37591474 on Build GRCh38
rs867072933	Chr.14: 37591443-37591443 on Build GRCh38
rs749443757	Chr.14: 37591520-37591520 on Build GRCh38
rs1022566815	Chr.14: 37591324-37591324 on Build GRCh38
rs141004703	Chr.14: 37591412-37591412 on Build GRCh38
rs897795973	Chr.14: 37591437-37591437 on Build GRCh38
rs909497251	Chr.14: 37591402-37591402 on Build GRCh38
rs373020885	Chr.14: 37591413-37591413 on Build GRCh38
rs750731146	Chr.14: 37591322-37591322 on Build GRCh38
rs771991531	Chr.14: 37591525-37591525 on Build GRCh38
rs746573702	Chr.14: 37591339-37591339 on Build GRCh38
rs367849941	Chr.14: 37591351-37591351 on Build GRCh38
rs776725888	Chr.14: 37591436-37591436 on Build GRCh38
rs768015890	Chr.14: 37591348-37591348 on Build GRCh38
rs181561875	Chr.14: 37591328-37591328 on Build GRCh38
rs33984772	Chr.14: 37591441-37591441 on Build GRCh38
rs150277709	Chr.14: 37591452-37591452 on Build GRCh38
rs773144107	Chr.14: 37591397-37591397 on Build GRCh38
rs780709606	Chr.14: 37591359-37591359 on Build GRCh38
rs916651137	Chr.14: 37591440-37591440 on Build GRCh38
rs776976444	Chr.14: 37591347-37591348 on Build GRCh38
rs375938424	Chr.14: 37591488-37591488 on Build GRCh38
rs770819038	Chr.14: 37591502-37591502 on Build GRCh38
rs749145227	Chr.14: 37591496-37591496 on Build GRCh38
rs758736377	Chr.14: 37591461-37591461 on Build GRCh38
rs530973207	Chr.14: 37591515-37591515 on Build GRCh38
rs561930261	Chr.14: 37591483-37591483 on Build GRCh38
rs749090160	Chr.14: 37591411-37591411 on Build GRCh38
rs923005164	Chr.14: 37591307-37591308 on Build GRCh38
rs747775950	Chr.14: 37591380-37591380 on Build GRCh38
rs2698	Chr.14: 37591307-37591307 on Build GRCh38
rs779274463	Chr.14: 37591316-37591316 on Build GRCh38
rs769510593	Chr.14: 37591384-37591384 on Build GRCh38

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