Product Details

Primer Sequences

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Primer Chromosome Location

Chr.16: 67611203-67611474 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

CTCF

Entrez Gene ID

10664

Gene Name

CCCTC-binding factor

Gene Aliases

MRD21

UniGene

Hs.368367

Gene Chromosome Location

Chr.16: 67562407-67639185 on Build GRCh38

Transcripts

NM_001191022.1 NM_006565.3 XM_005255775.3 XM_017022868.1 XM_017022869.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
6845235	c.575_576insA	p.D194fs*36	Chr.16: 67611407-67611408 on Build GRCh38
6845266	c.383delC	p.T129fs*3	Chr.16: 67611215-67611215 on Build GRCh38
2995127	c.552_553insC	p.Q186fs*5	Chr.16: 67611384-67611385 on Build GRCh38
6974544	c.430A>T	p.K144*	Chr.16: 67611262-67611262 on Build GRCh38
6915704	c.615G>T	p.K205N	Chr.16: 67611447-67611447 on Build GRCh38
1716418	c.626_627delAG	p.S210fs*19	Chr.16: 67611458-67611459 on Build GRCh38
6910946	c.475C>T	p.P159S	Chr.16: 67611307-67611307 on Build GRCh38
6330777	c.611C>A	p.T204K	Chr.16: 67611443-67611443 on Build GRCh38
1716412	c.422_426AAGTG>T	p.E141fs*12	Chr.16: 67611254-67611258 on Build GRCh38
1716414	c.610_611insA	p.T204fs*26	Chr.16: 67611442-67611443 on Build GRCh38
6845233	c.611_612insA	p.K206fs*24	Chr.16: 67611443-67611444 on Build GRCh38
6940180	c.553C>T	p.P185S	Chr.16: 67611385-67611385 on Build GRCh38
6907344	c.638_639ins47	p.Y214fs*24	Chr.16: 67611470-67611471 on Build GRCh38
7350118	c.373C>T	p.P125S	Chr.16: 67611205-67611205 on Build GRCh38
6980499	c.603_604insAA	p.T204fs*19	Chr.16: 67611435-67611436 on Build GRCh38
6845243	c.394_395insGTACT	p.E132fs*24	Chr.16: 67611226-67611227 on Build GRCh38
6845200	c.495G>T	p.Q165H	Chr.16: 67611327-67611327 on Build GRCh38
4617689	c.638G>A	p.R213H	Chr.16: 67611470-67611470 on Build GRCh38
6845239	c.416_417insA	p.N140fs*2	Chr.16: 67611248-67611249 on Build GRCh38
1378946	c.574_575insA	p.D194fs*36	Chr.16: 67611406-67611407 on Build GRCh38
5903094	c.508G>A	p.G170R	Chr.16: 67611340-67611340 on Build GRCh38
6637228	c.541delG	p.E182fs*40	Chr.16: 67611373-67611373 on Build GRCh38
4765266	c.604_605insA	p.T204fs*26	Chr.16: 67611436-67611437 on Build GRCh38
4675311	c.556_557delCA	p.Q186fs*4	Chr.16: 67611388-67611389 on Build GRCh38
6981960	c.520G>A	p.E174K	Chr.16: 67611352-67611352 on Build GRCh38
5552848	c.435G>A	p.E145E	Chr.16: 67611267-67611267 on Build GRCh38
972473	c.556C>T	p.Q186*	Chr.16: 67611388-67611388 on Build GRCh38
6933464	c.622delA	p.K209fs*13	Chr.16: 67611454-67611454 on Build GRCh38
5751996	c.535_536insT	p.E179fs*12	Chr.16: 67611367-67611368 on Build GRCh38
6845217	c.389C>A	p.S130*	Chr.16: 67611221-67611221 on Build GRCh38
6278530	c.615G>A	p.K205K	Chr.16: 67611447-67611447 on Build GRCh38
972475	c.592C>T	p.Q198*	Chr.16: 67611424-67611424 on Build GRCh38
7335204	c.616A>G	p.K206E	Chr.16: 67611448-67611448 on Build GRCh38
166018	c.612_613delAA	p.K205fs*24	Chr.16: 67611444-67611445 on Build GRCh38
972469	c.433G>T	p.E145*	Chr.16: 67611265-67611265 on Build GRCh38
7343944	c.526G>T	p.E176*	Chr.16: 67611358-67611358 on Build GRCh38
972471	c.535G>T	p.E179*	Chr.16: 67611367-67611367 on Build GRCh38
5751489	c.414T>AT	p.Y138fs*1	Chr.16: 67611246-67611246 on Build GRCh38
2995129	c.604delA	p.T204fs*18	Chr.16: 67611436-67611436 on Build GRCh38
1716415	c.610delA	p.T204fs*18	Chr.16: 67611442-67611442 on Build GRCh38
1378945	c.540_541insG	p.E182fs*9	Chr.16: 67611372-67611373 on Build GRCh38
6845265	c.473delT	p.L158fs*21	Chr.16: 67611305-67611305 on Build GRCh38
2995122	c.397G>A	p.E133K	Chr.16: 67611229-67611229 on Build GRCh38
7343951	c.591T>G	p.Y197*	Chr.16: 67611423-67611423 on Build GRCh38
6971983	c.439C>G	p.L147V	Chr.16: 67611271-67611271 on Build GRCh38
1716413	c.405delG	p.A137fs*17	Chr.16: 67611237-67611237 on Build GRCh38
6953775	c.422A>G	p.E141G	Chr.16: 67611254-67611254 on Build GRCh38
6918419	c.383C>T	p.T128I	Chr.16: 67611215-67611215 on Build GRCh38
6845242	c.599_600insGCTG	p.A201fs*30	Chr.16: 67611431-67611432 on Build GRCh38
6845201	c.439C>T	p.L147F	Chr.16: 67611271-67611271 on Build GRCh38
6981374	c.544G>T	p.E182*	Chr.16: 67611376-67611376 on Build GRCh38
7350578	c.610A>C	p.T204P	Chr.16: 67611442-67611442 on Build GRCh38
7100129	c.433G>C	p.E145Q	Chr.16: 67611265-67611265 on Build GRCh38
6947909	c.565delC	p.P189fs*33	Chr.16: 67611397-67611397 on Build GRCh38
6845271	c.566_581del16	p.S190fs*27	Chr.16: 67611398-67611413 on Build GRCh38
6845240	c.611_612insAA	p.K206fs*17	Chr.16: 67611443-67611444 on Build GRCh38
6925312	c.421G>T	p.E141*	Chr.16: 67611253-67611253 on Build GRCh38
6929044	c.428C>T	p.S143F	Chr.16: 67611260-67611260 on Build GRCh38
6637231	c.572G>A	p.W191*	Chr.16: 67611404-67611404 on Build GRCh38
7415031	c.509G>T	p.G170V	Chr.16: 67611341-67611341 on Build GRCh38
4141845	c.629G>A	p.S210N	Chr.16: 67611461-67611461 on Build GRCh38
7163567	c.477T>C	p.P159P	Chr.16: 67611309-67611309 on Build GRCh38
6922867	c.551C>T	p.P184L	Chr.16: 67611383-67611383 on Build GRCh38
972474	c.591T>A	p.Y197*	Chr.16: 67611423-67611423 on Build GRCh38
6845214	c.397G>T	p.E133*	Chr.16: 67611229-67611229 on Build GRCh38
972476	c.619A>C	p.T207P	Chr.16: 67611451-67611451 on Build GRCh38
6845261	c.403delC	p.Q135fs*19	Chr.16: 67611235-67611235 on Build GRCh38
1180830	c.603_604insA	p.T204fs*26	Chr.16: 67611435-67611436 on Build GRCh38
972470	c.488G>A	p.G163E	Chr.16: 67611320-67611320 on Build GRCh38
435529	c.573G>A	p.W191*	Chr.16: 67611405-67611405 on Build GRCh38
972472	c.538C>T	p.Q180*	Chr.16: 67611370-67611370 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs369939556	Chr.16: 67611237-67611237 on Build GRCh38
rs763743813	Chr.16: 67611330-67611330 on Build GRCh38
rs373823720	Chr.16: 67611247-67611247 on Build GRCh38
rs779020931	Chr.16: 67611268-67611268 on Build GRCh38
rs377709753	Chr.16: 67611277-67611277 on Build GRCh38
rs866170521	Chr.16: 67611443-67611443 on Build GRCh38
rs758670950	Chr.16: 67611433-67611433 on Build GRCh38
rs759449563	Chr.16: 67611285-67611285 on Build GRCh38
rs756610479	Chr.16: 67611387-67611387 on Build GRCh38
rs749650039	Chr.16: 67611248-67611248 on Build GRCh38
rs779404795	Chr.16: 67611408-67611408 on Build GRCh38
rs376744931	Chr.16: 67611312-67611312 on Build GRCh38
rs761761096	Chr.16: 67611430-67611430 on Build GRCh38
rs754178156	Chr.16: 67611398-67611398 on Build GRCh38
rs933470800	Chr.16: 67611271-67611271 on Build GRCh38
rs200516339	Chr.16: 67611228-67611228 on Build GRCh38
rs767120755	Chr.16: 67611360-67611360 on Build GRCh38
rs773340288	Chr.16: 67611279-67611279 on Build GRCh38
rs769661363	Chr.16: 67611306-67611306 on Build GRCh38
rs749999010	Chr.16: 67611376-67611376 on Build GRCh38
rs748358750	Chr.16: 67611428-67611428 on Build GRCh38
rs148372058	Chr.16: 67611276-67611276 on Build GRCh38
rs373511929	Chr.16: 67611280-67611280 on Build GRCh38
rs774149823	Chr.16: 67611342-67611342 on Build GRCh38
rs766823310	Chr.16: 67611389-67611389 on Build GRCh38
rs750959177	Chr.16: 67611230-67611230 on Build GRCh38
rs762678010	Chr.16: 67611321-67611321 on Build GRCh38
rs768877983	Chr.16: 67611259-67611259 on Build GRCh38
rs878885019	Chr.16: 67611418-67611418 on Build GRCh38
rs886041997	Chr.16: 67611442-67611443 on Build GRCh38
rs748162324	Chr.16: 67611269-67611269 on Build GRCh38
rs761623880	Chr.16: 67611347-67611347 on Build GRCh38

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