Product Details

Primer Sequences

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Primer Chromosome Location

Chr.1: 102878030-102878263 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

COL11A1

Entrez Gene ID

1301

Gene Name

collagen type XI alpha 1 chain

Gene Aliases

CO11A1, COLL6, STL2

UniGene

Hs.523446

Gene Chromosome Location

Chr.1: 102876467-103108580 on Build GRCh38

Transcripts

NM_001190709.1 NM_001854.3 NM_080629.2 NM_080630.3 NR_134980.1 XM_017000334.1 XM_017000335.1 XM_017000337.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
7241913	c.5336C>T	p.P1779L	Chr.1: 102878104-102878104 on Build GRCh38
6533795	c.5319A>C	p.K1773N	Chr.1: 102878157-102878157 on Build GRCh38
4019950	c.5398T>G	p.F1800V	Chr.1: 102878078-102878078 on Build GRCh38
1626257	c.5417A>T	p.K1806M	Chr.1: 102878059-102878059 on Build GRCh38
6197018	c.5364T>A	p.D1788E	Chr.1: 102878112-102878112 on Build GRCh38
7420113	c.5391C>T	p.I1797I	Chr.1: 102878085-102878085 on Build GRCh38
5528912	c.5341G>A	p.E1781K	Chr.1: 102878135-102878135 on Build GRCh38
7420112	c.5355C>T	p.I1785I	Chr.1: 102878085-102878085 on Build GRCh38
1667753	c.5421C>A	p.F1807L	Chr.1: 102878055-102878055 on Build GRCh38
3862053	c.5385C>T	p.V1795V	Chr.1: 102878091-102878091 on Build GRCh38
1626258	c.5381A>T	p.K1794M	Chr.1: 102878059-102878059 on Build GRCh38
3470414	c.5422G>A	p.G1808R	Chr.1: 102878054-102878054 on Build GRCh38
5664720	c.5353C>A	p.P1785T	Chr.1: 102878123-102878123 on Build GRCh38
4823076	c.5396A>C	p.D1799A	Chr.1: 102878080-102878080 on Build GRCh38
4914502	c.5276C>A	p.S1759Y	Chr.1: 102878164-102878164 on Build GRCh38
4019951	c.5362T>G	p.F1788V	Chr.1: 102878078-102878078 on Build GRCh38
280021	c.5418G>A	p.K1806K	Chr.1: 102878058-102878058 on Build GRCh38
1667754	c.5385C>A	p.F1795L	Chr.1: 102878055-102878055 on Build GRCh38
1953752	c.5371C>A	p.P1791T	Chr.1: 102878105-102878105 on Build GRCh38
5349932	c.5357A>C	p.N1786T	Chr.1: 102878083-102878083 on Build GRCh38
5770370	c.5405A>G	p.D1802G	Chr.1: 102878071-102878071 on Build GRCh38
5664721	c.5317C>A	p.P1773T	Chr.1: 102878123-102878123 on Build GRCh38
7167329	c.5344G>C	p.D1782H	Chr.1: 102878096-102878096 on Build GRCh38
4404153	c.5310C>T	p.I1770I	Chr.1: 102878130-102878130 on Build GRCh38
6507551	c.5326G>T	p.D1776Y	Chr.1: 102878114-102878114 on Build GRCh38
234556	c.5421C>T	p.F1807F	Chr.1: 102878055-102878055 on Build GRCh38
364894	c.5290G>T	p.E1764*	Chr.1: 102878150-102878150 on Build GRCh38
3470415	c.5386G>A	p.G1796R	Chr.1: 102878054-102878054 on Build GRCh38
1953753	c.5335C>A	p.P1779T	Chr.1: 102878105-102878105 on Build GRCh38
5770371	c.5369A>G	p.D1790G	Chr.1: 102878071-102878071 on Build GRCh38
6507552	c.5320G>T	p.G1774C	Chr.1: 102878156-102878156 on Build GRCh38
4914501	c.5312C>A	p.S1771Y	Chr.1: 102878164-102878164 on Build GRCh38
5418177	c.5408A>G	p.Q1803R	Chr.1: 102878068-102878068 on Build GRCh38
893085	c.5389T>A	p.F1797I	Chr.1: 102878051-102878051 on Build GRCh38
5528913	c.5305G>A	p.E1769K	Chr.1: 102878135-102878135 on Build GRCh38
6057248	c.5283A>T	p.K1761N	Chr.1: 102878157-102878157 on Build GRCh38
7241914	c.5372C>T	p.P1791L	Chr.1: 102878104-102878104 on Build GRCh38
3417793	c.5315G>T	p.R1772I	Chr.1: 102878161-102878161 on Build GRCh38
3801079	c.5331G>C	p.K1777N	Chr.1: 102878145-102878145 on Build GRCh38
4431284	c.5373G>A	p.Q1791Q	Chr.1: 102878067-102878067 on Build GRCh38
4673475	c.5368G>T	p.V1790L	Chr.1: 102878108-102878108 on Build GRCh38
4791884	c.5323T>A	p.Y1775N	Chr.1: 102878153-102878153 on Build GRCh38
3470412	c.5438C>T	p.P1813L	Chr.1: 102878038-102878038 on Build GRCh38
3801080	c.5295G>C	p.K1765N	Chr.1: 102878145-102878145 on Build GRCh38
674677	c.5392G>A	p.E1798K	Chr.1: 102878048-102878048 on Build GRCh38
4673476	c.5332G>T	p.V1778L	Chr.1: 102878108-102878108 on Build GRCh38
5418178	c.5372A>G	p.Q1791R	Chr.1: 102878068-102878068 on Build GRCh38
7091553	c.5328A>C	p.E1776D	Chr.1: 102878148-102878148 on Build GRCh38
6533796	c.5283A>C	p.K1761N	Chr.1: 102878157-102878157 on Build GRCh38
6197019	c.5328T>A	p.D1776E	Chr.1: 102878112-102878112 on Build GRCh38
674676	c.5428G>A	p.E1810K	Chr.1: 102878048-102878048 on Build GRCh38
893084	c.5425T>A	p.F1809I	Chr.1: 102878051-102878051 on Build GRCh38
7091552	c.5292A>C	p.E1764D	Chr.1: 102878148-102878148 on Build GRCh38
4823077	c.5360A>C	p.D1787A	Chr.1: 102878080-102878080 on Build GRCh38
1953754	c.5359delA	p.I1787fs*10	Chr.1: 102878117-102878117 on Build GRCh38
3862054	c.5349C>T	p.V1783V	Chr.1: 102878091-102878091 on Build GRCh38
3417794	c.5279G>T	p.R1760I	Chr.1: 102878161-102878161 on Build GRCh38
4791885	c.5287T>A	p.Y1763N	Chr.1: 102878153-102878153 on Build GRCh38
7167330	c.5380G>C	p.D1794H	Chr.1: 102878096-102878096 on Build GRCh38
5349931	c.5393A>C	p.N1798T	Chr.1: 102878083-102878083 on Build GRCh38
6632344	c.5346C>A	p.I1782I	Chr.1: 102878130-102878130 on Build GRCh38
4404152	c.5346C>T	p.I1782I	Chr.1: 102878130-102878130 on Build GRCh38
6632345	c.5310C>A	p.I1770I	Chr.1: 102878130-102878130 on Build GRCh38
364893	c.5326G>T	p.E1776*	Chr.1: 102878150-102878150 on Build GRCh38
3470413	c.5402C>T	p.P1801L	Chr.1: 102878038-102878038 on Build GRCh38
1953747	c.5385C>T	p.F1795F	Chr.1: 102878055-102878055 on Build GRCh38
6507553	c.5284G>T	p.G1762C	Chr.1: 102878156-102878156 on Build GRCh38
6057247	c.5319A>T	p.K1773N	Chr.1: 102878157-102878157 on Build GRCh38
1953755	c.5323delA	p.I1775fs*10	Chr.1: 102878117-102878117 on Build GRCh38
4431283	c.5409G>A	p.Q1803Q	Chr.1: 102878067-102878067 on Build GRCh38
6507550	c.5362G>T	p.D1788Y	Chr.1: 102878114-102878114 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs200514622	Chr.1: 102878210-102878210 on Build GRCh38
rs748518624	Chr.1: 102878180-102878180 on Build GRCh38
rs199848923	Chr.1: 102878126-102878126 on Build GRCh38
rs775083694	Chr.1: 102878093-102878093 on Build GRCh38
rs571497194	Chr.1: 102878078-102878078 on Build GRCh38
rs770392400	Chr.1: 102878055-102878055 on Build GRCh38
rs756303349	Chr.1: 102878148-102878148 on Build GRCh38
rs755371727	Chr.1: 102878168-102878168 on Build GRCh38
rs991011471	Chr.1: 102878108-102878108 on Build GRCh38
rs367853741	Chr.1: 102878165-102878165 on Build GRCh38
rs144510951	Chr.1: 102878081-102878081 on Build GRCh38
rs925433052	Chr.1: 102878054-102878054 on Build GRCh38
rs1036630733	Chr.1: 102878136-102878136 on Build GRCh38
rs200949243	Chr.1: 102878174-102878174 on Build GRCh38
rs777439432	Chr.1: 102878193-102878193 on Build GRCh38
rs746621015	Chr.1: 102878195-102878195 on Build GRCh38
rs750652823	Chr.1: 102878123-102878123 on Build GRCh38
rs930447176	Chr.1: 102878219-102878219 on Build GRCh38
rs372652686	Chr.1: 102878191-102878191 on Build GRCh38
rs949030111	Chr.1: 102878196-102878196 on Build GRCh38
rs762806617	Chr.1: 102878111-102878111 on Build GRCh38
rs532113782	Chr.1: 102878115-102878115 on Build GRCh38
rs765097661	Chr.1: 102878085-102878085 on Build GRCh38
rs940451517	Chr.1: 102878084-102878084 on Build GRCh38
rs766529064	Chr.1: 102878156-102878156 on Build GRCh38

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