Product Details

Primer Sequences

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Primer Chromosome Location

Chr.11: 27658023-27658282 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

BDNF

Entrez Gene ID

627

Gene Name

brain derived neurotrophic factor

Gene Aliases

ANON2, BULN2

UniGene

Hs.502182

Gene Chromosome Location

Chr.11: 27654893-27722058 on Build GRCh38

Transcripts

NM_001143805.1 NM_001143806.1 NM_001143807.1 NM_001143808.1 NM_001143809.1 NM_001143810.1 NM_001143811.1 NM_001143812.1 NM_001143813.1 NM_001143814.1 NM_001143816.1 NM_001709.4 NM_170731.4 NM_170732.4 NM_170733.3 NM_170734.3 NM_170735.5 XM_011520280.2 NR_002832.2 NR_033312.1 NR_033313.1 NR_033314.1 NR_033315.1

Gene Symbol

BDNF-AS

Entrez Gene ID

497258

Gene Name

BDNF antisense RNA

Gene Aliases

ANTI-BDNF, BDNF, BDNF-AS1, BDNFOS, NCRNA00049

UniGene

Hs.675323

Gene Chromosome Location

Chr.11: 27506852-27698171 on Build GRCh38

Transcripts

NM_001143805.1 NM_001143806.1 NM_001143807.1 NM_001143808.1 NM_001143809.1 NM_001143810.1 NM_001143811.1 NM_001143812.1 NM_001143813.1 NM_001143814.1 NM_001143816.1 NM_001709.4 NM_170731.4 NM_170732.4 NM_170733.3 NM_170734.3 NM_170735.5 XM_011520280.2 NR_002832.2 NR_033312.1 NR_033313.1 NR_033314.1 NR_033315.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
1353340	c.404G>A	p.R135Q	Chr.11: 27658185-27658185 on Build GRCh38
5731926	c.748G>A	p.E250K	Chr.11: 27658063-27658063 on Build GRCh38
403634	c.512C>T	p.T171M	Chr.11: 27658077-27658077 on Build GRCh38
1246067	c.730G>A	p.G244R	Chr.11: 27658081-27658081 on Build GRCh38
4865180	c.524C>T	p.S175L	Chr.11: 27658086-27658086 on Build GRCh38
4909988	c.568G>C	p.G190R	Chr.11: 27658042-27658042 on Build GRCh38
4032228	c.664G>A	p.V222M	Chr.11: 27658147-27658147 on Build GRCh38
4032229	c.463G>A	p.V155M	Chr.11: 27658147-27658147 on Build GRCh38
4872761	c.461G>T	p.S154I	Chr.11: 27658149-27658149 on Build GRCh38
4455237	c.481A>C	p.K161Q	Chr.11: 27658108-27658108 on Build GRCh38
5838384	c.695C>T	p.A232V	Chr.11: 27658116-27658116 on Build GRCh38
1353341	c.625C>T	p.R209W	Chr.11: 27658186-27658186 on Build GRCh38
272385	c.425G>A	p.R142H	Chr.11: 27658164-27658164 on Build GRCh38
4949267	c.425G>A	p.R142Q	Chr.11: 27658185-27658185 on Build GRCh38
4555425	c.432G>A	p.G144G	Chr.11: 27658157-27658157 on Build GRCh38
6132152	c.642T>A	p.P214P	Chr.11: 27658169-27658169 on Build GRCh38
926146	c.403C>T	p.R135W	Chr.11: 27658186-27658186 on Build GRCh38
926144	c.503C>T	p.S168L	Chr.11: 27658086-27658086 on Build GRCh38
3383408	c.485A>C	p.K162T	Chr.11: 27658104-27658104 on Build GRCh38
1585693	c.662G>T	p.S221I	Chr.11: 27658149-27658149 on Build GRCh38
5838388	c.379G>A	p.E127K	Chr.11: 27658231-27658231 on Build GRCh38
4555423	c.654G>A	p.G218G	Chr.11: 27658157-27658157 on Build GRCh38
1675914	c.734C>T	p.T245M	Chr.11: 27658077-27658077 on Build GRCh38
3415788	c.491C>T	p.T164M	Chr.11: 27658119-27658119 on Build GRCh38
4665587	c.647G>A	p.R216H	Chr.11: 27658164-27658164 on Build GRCh38
3383407	c.506A>C	p.K169T	Chr.11: 27658104-27658104 on Build GRCh38
3446577	c.447C>T	p.R149R	Chr.11: 27658163-27658163 on Build GRCh38
3383409	c.629G>A	p.R210H	Chr.11: 27658182-27658182 on Build GRCh38
5838389	c.358G>A	p.E120K	Chr.11: 27658231-27658231 on Build GRCh38
3446576	c.648C>T	p.R216R	Chr.11: 27658163-27658163 on Build GRCh38
4032230	c.442G>A	p.V148M	Chr.11: 27658147-27658147 on Build GRCh38
3791429	c.469G>C	p.D157H	Chr.11: 27658141-27658141 on Build GRCh38
1246068	c.508G>A	p.G170R	Chr.11: 27658081-27658081 on Build GRCh38
3791428	c.670G>C	p.D224H	Chr.11: 27658141-27658141 on Build GRCh38
4866560	c.400G>A	p.A134T	Chr.11: 27658210-27658210 on Build GRCh38
6611164	c.368A>G	p.N123S	Chr.11: 27658221-27658221 on Build GRCh38
5838387	c.580G>A	p.E194K	Chr.11: 27658231-27658231 on Build GRCh38
4032226	c.534G>A	p.T178T	Chr.11: 27658076-27658076 on Build GRCh38
4032231	c.566T>C	p.L189P	Chr.11: 27658245-27658245 on Build GRCh38
1353339	c.626G>A	p.R209Q	Chr.11: 27658185-27658185 on Build GRCh38
4032225	c.735G>A	p.T245T	Chr.11: 27658076-27658076 on Build GRCh38
300570	c.507C>T	p.G169G	Chr.11: 27658082-27658082 on Build GRCh38
4032232	c.365T>C	p.L122P	Chr.11: 27658245-27658245 on Build GRCh38
4909989	c.547G>C	p.G183R	Chr.11: 27658042-27658042 on Build GRCh38
1585694	c.725C>T	p.S242L	Chr.11: 27658086-27658086 on Build GRCh38
4455235	c.703A>C	p.K235Q	Chr.11: 27658108-27658108 on Build GRCh38
926147	c.379G>A	p.A127T	Chr.11: 27658210-27658210 on Build GRCh38
341651	c.369T>A	p.N123K	Chr.11: 27658220-27658220 on Build GRCh38
1585692	c.601G>A	p.A201T	Chr.11: 27658210-27658210 on Build GRCh38
926145	c.440G>T	p.S147I	Chr.11: 27658149-27658149 on Build GRCh38
3383411	c.407G>A	p.R136H	Chr.11: 27658182-27658182 on Build GRCh38
5838385	c.494C>T	p.A165V	Chr.11: 27658116-27658116 on Build GRCh38
4455236	c.502A>C	p.K168Q	Chr.11: 27658108-27658108 on Build GRCh38
5731927	c.547G>A	p.E183K	Chr.11: 27658063-27658063 on Build GRCh38
343983	c.426C>T	p.R142R	Chr.11: 27658163-27658163 on Build GRCh38
6611162	c.590A>G	p.N197S	Chr.11: 27658221-27658221 on Build GRCh38
3383410	c.428G>A	p.R143H	Chr.11: 27658182-27658182 on Build GRCh38
6132153	c.441T>A	p.P147P	Chr.11: 27658169-27658169 on Build GRCh38
3383406	c.707A>C	p.K236T	Chr.11: 27658104-27658104 on Build GRCh38
5838386	c.473C>T	p.A158V	Chr.11: 27658116-27658116 on Build GRCh38
4555424	c.453G>A	p.G151G	Chr.11: 27658157-27658157 on Build GRCh38
5731928	c.526G>A	p.E176K	Chr.11: 27658063-27658063 on Build GRCh38
4909987	c.769G>C	p.G257R	Chr.11: 27658042-27658042 on Build GRCh38
1184634	c.470C>T	p.T157M	Chr.11: 27658119-27658119 on Build GRCh38
4665588	c.446G>A	p.R149H	Chr.11: 27658164-27658164 on Build GRCh38
6132154	c.420T>A	p.P140P	Chr.11: 27658169-27658169 on Build GRCh38
3791430	c.448G>C	p.D150H	Chr.11: 27658141-27658141 on Build GRCh38
4032233	c.344T>C	p.L115P	Chr.11: 27658245-27658245 on Build GRCh38
1184633	c.692C>T	p.T231M	Chr.11: 27658119-27658119 on Build GRCh38
6611163	c.389A>G	p.N130S	Chr.11: 27658221-27658221 on Build GRCh38
4032227	c.513G>A	p.T171T	Chr.11: 27658076-27658076 on Build GRCh38
4784839	c.424C>T	p.R142W	Chr.11: 27658186-27658186 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs750743108	Chr.11: 27658202-27658202 on Build GRCh38
rs755151584	Chr.11: 27658242-27658242 on Build GRCh38
rs148736382	Chr.11: 27658244-27658244 on Build GRCh38
rs754270781	Chr.11: 27658077-27658077 on Build GRCh38
rs777804423	Chr.11: 27658109-27658109 on Build GRCh38
rs763510956	Chr.11: 27658190-27658190 on Build GRCh38
rs1048220	Chr.11: 27658191-27658191 on Build GRCh38
rs766669848	Chr.11: 27658226-27658226 on Build GRCh38
rs751698045	Chr.11: 27658234-27658234 on Build GRCh38
rs760274076	Chr.11: 27658148-27658148 on Build GRCh38
rs758638310	Chr.11: 27658213-27658213 on Build GRCh38
rs764711746	Chr.11: 27658076-27658076 on Build GRCh38
rs2353512	Chr.11: 27658115-27658115 on Build GRCh38
rs17852698	Chr.11: 27658211-27658211 on Build GRCh38
rs540912088	Chr.11: 27658153-27658153 on Build GRCh38
rs935219250	Chr.11: 27658256-27658256 on Build GRCh38
rs774985498	Chr.11: 27658147-27658147 on Build GRCh38
rs1048221	Chr.11: 27658185-27658185 on Build GRCh38
rs761108714	Chr.11: 27658070-27658070 on Build GRCh38
rs376008850	Chr.11: 27658082-27658082 on Build GRCh38
rs77787410	Chr.11: 27658057-27658057 on Build GRCh38
rs747058681	Chr.11: 27658100-27658100 on Build GRCh38
rs750030464	Chr.11: 27658086-27658086 on Build GRCh38
rs1049779568	Chr.11: 27658173-27658173 on Build GRCh38
rs771802172	Chr.11: 27658142-27658142 on Build GRCh38
rs201468555	Chr.11: 27658102-27658102 on Build GRCh38
rs765594245	Chr.11: 27658200-27658200 on Build GRCh38
rs144235869	Chr.11: 27658118-27658118 on Build GRCh38
rs749232626	Chr.11: 27658112-27658112 on Build GRCh38
rs766339291	Chr.11: 27658207-27658207 on Build GRCh38
rs774229943	Chr.11: 27658116-27658116 on Build GRCh38
rs201119590	Chr.11: 27658195-27658195 on Build GRCh38
rs370102323	Chr.11: 27658085-27658085 on Build GRCh38
rs990473824	Chr.11: 27658114-27658114 on Build GRCh38

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