Product Details

Primer Sequences

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Primer Chromosome Location

Chr.5: 26885561-26885834 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

CDH9

Entrez Gene ID

1007

Gene Name

cadherin 9

Gene Aliases

-

UniGene

Hs.272212

Gene Chromosome Location

Chr.5: 26880600-27038582 on Build GRCh38

Transcripts

NM_016279.3

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
1695514	c.1826C>T	p.A609V	Chr.5: 26885670-26885670 on Build GRCh38
5463436	c.1839G>A	p.T613T	Chr.5: 26885657-26885657 on Build GRCh38
347309	c.1826C>G	p.A609G	Chr.5: 26885670-26885670 on Build GRCh38
279774	c.1853C>T	p.A618V	Chr.5: 26885643-26885643 on Build GRCh38
449508	c.1760G>A	p.R587H	Chr.5: 26885736-26885736 on Build GRCh38
4966227	c.1854G>A	p.A618A	Chr.5: 26885642-26885642 on Build GRCh38
4671026	c.1701G>A	p.P567P	Chr.5: 26885795-26885795 on Build GRCh38
5924346	c.1732C>T	p.Q578*	Chr.5: 26885764-26885764 on Build GRCh38
1685967	c.1720G>A	p.D574N	Chr.5: 26885776-26885776 on Build GRCh38
5918606	c.1802C>T	p.T601I	Chr.5: 26885694-26885694 on Build GRCh38
6170720	c.1843G>C	p.A615P	Chr.5: 26885653-26885653 on Build GRCh38
6493565	c.1793A>G	p.Q598R	Chr.5: 26885703-26885703 on Build GRCh38
1067164	c.1804G>A	p.A602T	Chr.5: 26885692-26885692 on Build GRCh38
3965635	c.1676A>G	p.N559S	Chr.5: 26885820-26885820 on Build GRCh38
70123	c.1825G>A	p.A609T	Chr.5: 26885671-26885671 on Build GRCh38
3854619	c.1775A>C	p.D592A	Chr.5: 26885721-26885721 on Build GRCh38
3854617	c.1865G>A	p.C622Y	Chr.5: 26885631-26885631 on Build GRCh38
7360574	c.1836C>A	p.S612R	Chr.5: 26885660-26885660 on Build GRCh38
310007	c.1882+1G>T	p.?	Chr.5: 26885613-26885613 on Build GRCh38
738207	c.1675A>T	p.N559Y	Chr.5: 26885821-26885821 on Build GRCh38
139571	c.1774G>A	p.D592N	Chr.5: 26885722-26885722 on Build GRCh38
4804729	c.1853C>A	p.A618E	Chr.5: 26885643-26885643 on Build GRCh38
5813571	c.1695A>T	p.L565F	Chr.5: 26885801-26885801 on Build GRCh38
4141767	c.1750C>A	p.L584I	Chr.5: 26885746-26885746 on Build GRCh38
3014087	c.1829G>C	p.G610A	Chr.5: 26885667-26885667 on Build GRCh38
1067166	c.1758C>A	p.I586I	Chr.5: 26885738-26885738 on Build GRCh38
387534	c.1677C>A	p.N559K	Chr.5: 26885819-26885819 on Build GRCh38
6103474	c.1872C>A	p.L624L	Chr.5: 26885624-26885624 on Build GRCh38
374499	c.1830C>T	p.G610G	Chr.5: 26885666-26885666 on Build GRCh38
6491872	c.1780C>T	p.Q594*	Chr.5: 26885716-26885716 on Build GRCh38
5982177	c.1710C>G	p.I570M	Chr.5: 26885786-26885786 on Build GRCh38
345746	c.1672C>A	p.R558S	Chr.5: 26885824-26885824 on Build GRCh38
1695515	c.1784G>A	p.G595E	Chr.5: 26885712-26885712 on Build GRCh38
4472972	c.1819C>T	p.L607F	Chr.5: 26885677-26885677 on Build GRCh38
7265162	c.1815G>T	p.L605L	Chr.5: 26885681-26885681 on Build GRCh38
6425444	c.1814T>C	p.L605P	Chr.5: 26885682-26885682 on Build GRCh38
4671025	c.1849G>A	p.V617I	Chr.5: 26885647-26885647 on Build GRCh38
1067163	c.1870C>A	p.L624I	Chr.5: 26885626-26885626 on Build GRCh38
1543358	c.1852G>A	p.A618T	Chr.5: 26885644-26885644 on Build GRCh38
4603750	c.1841delG	p.G614fs*16	Chr.5: 26885655-26885655 on Build GRCh38
6493545	c.1700C>A	p.P567Q	Chr.5: 26885796-26885796 on Build GRCh38
3854618	c.1838C>T	p.T613M	Chr.5: 26885658-26885658 on Build GRCh38
5798233	c.1698G>T	p.L566F	Chr.5: 26885798-26885798 on Build GRCh38
6492997	c.1787A>T	p.N596I	Chr.5: 26885709-26885709 on Build GRCh38
738208	c.1839G>T	p.T613T	Chr.5: 26885657-26885657 on Build GRCh38
351205	c.1760G>C	p.R587P	Chr.5: 26885736-26885736 on Build GRCh38
4832154	c.1672C>T	p.R558C	Chr.5: 26885824-26885824 on Build GRCh38
1620212	c.1786A>G	p.N596D	Chr.5: 26885710-26885710 on Build GRCh38
5356878	c.1822T>C	p.S608P	Chr.5: 26885674-26885674 on Build GRCh38
4388366	c.1719C>T	p.N573N	Chr.5: 26885777-26885777 on Build GRCh38
3014089	c.1759C>T	p.R587C	Chr.5: 26885737-26885737 on Build GRCh38
3729297	c.1673G>A	p.R558H	Chr.5: 26885823-26885823 on Build GRCh38
7155010	c.1818C>T	p.I606I	Chr.5: 26885678-26885678 on Build GRCh38
1067165	c.1773C>T	p.C591C	Chr.5: 26885723-26885723 on Build GRCh38
6170721	c.1875A>T	p.I625I	Chr.5: 26885621-26885621 on Build GRCh38
1728305	c.1826C>A	p.A609D	Chr.5: 26885670-26885670 on Build GRCh38
6546101	c.1802C>A	p.T601N	Chr.5: 26885694-26885694 on Build GRCh38
7206637	c.1756A>G	p.I586V	Chr.5: 26885740-26885740 on Build GRCh38
4438548	c.1690T>C	p.Y564H	Chr.5: 26885806-26885806 on Build GRCh38
6103473	c.1849G>C	p.V617L	Chr.5: 26885647-26885647 on Build GRCh38
6231676	c.1727C>A	p.P576Q	Chr.5: 26885769-26885769 on Build GRCh38
7201789	c.1681A>G	p.M561V	Chr.5: 26885815-26885815 on Build GRCh38
4610313	c.1828G>A	p.G610S	Chr.5: 26885668-26885668 on Build GRCh38
219411	c.1831C>G	p.L611V	Chr.5: 26885665-26885665 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs776466510	Chr.5: 26885603-26885603 on Build GRCh38
rs145328141	Chr.5: 26885657-26885657 on Build GRCh38
rs765808716	Chr.5: 26885633-26885633 on Build GRCh38
rs577458372	Chr.5: 26885643-26885643 on Build GRCh38
rs200213618	Chr.5: 26885602-26885602 on Build GRCh38
rs934703578	Chr.5: 26885693-26885693 on Build GRCh38
rs199731142	Chr.5: 26885642-26885642 on Build GRCh38
rs759028912	Chr.5: 26885807-26885807 on Build GRCh38
rs764653452	Chr.5: 26885692-26885692 on Build GRCh38
rs746260289	Chr.5: 26885722-26885722 on Build GRCh38
rs868132240	Chr.5: 26885770-26885770 on Build GRCh38
rs564401936	Chr.5: 26885647-26885647 on Build GRCh38
rs34490509	Chr.5: 26885688-26885688 on Build GRCh38
rs867964392	Chr.5: 26885776-26885776 on Build GRCh38
rs967893158	Chr.5: 26885677-26885677 on Build GRCh38
rs779111151	Chr.5: 26885721-26885721 on Build GRCh38
rs987476665	Chr.5: 26885709-26885709 on Build GRCh38
rs768684659	Chr.5: 26885658-26885658 on Build GRCh38
rs1007187000	Chr.5: 26885773-26885773 on Build GRCh38
rs147997829	Chr.5: 26885686-26885686 on Build GRCh38
rs781346703	Chr.5: 26885753-26885753 on Build GRCh38
rs943657990	Chr.5: 26885789-26885789 on Build GRCh38
rs926587542	Chr.5: 26885627-26885627 on Build GRCh38
rs541154525	Chr.5: 26885648-26885648 on Build GRCh38
rs764882241	Chr.5: 26885668-26885668 on Build GRCh38
rs776501248	Chr.5: 26885662-26885662 on Build GRCh38
rs747968491	Chr.5: 26885777-26885777 on Build GRCh38
rs764152176	Chr.5: 26885598-26885598 on Build GRCh38
rs201744411	Chr.5: 26885792-26885792 on Build GRCh38
rs200287957	Chr.5: 26885667-26885667 on Build GRCh38
rs772941002	Chr.5: 26885786-26885786 on Build GRCh38
rs746024247	Chr.5: 26885651-26885651 on Build GRCh38
rs376516291	Chr.5: 26885618-26885618 on Build GRCh38
rs754519888	Chr.5: 26885690-26885690 on Build GRCh38
rs757790253	Chr.5: 26885714-26885714 on Build GRCh38
rs1039281244	Chr.5: 26885796-26885796 on Build GRCh38
rs754356776	Chr.5: 26885707-26885707 on Build GRCh38
rs1049983109	Chr.5: 26885728-26885728 on Build GRCh38
rs768676133	Chr.5: 26885747-26885747 on Build GRCh38
rs773063582	Chr.5: 26885672-26885672 on Build GRCh38
rs758675428	Chr.5: 26885723-26885723 on Build GRCh38
rs762551054	Chr.5: 26885678-26885678 on Build GRCh38
rs770537311	Chr.5: 26885797-26885797 on Build GRCh38
rs763497540	Chr.5: 26885736-26885736 on Build GRCh38
rs762783281	Chr.5: 26885795-26885795 on Build GRCh38
rs761555910	Chr.5: 26885607-26885607 on Build GRCh38
rs200942372	Chr.5: 26885754-26885754 on Build GRCh38
rs750102029	Chr.5: 26885630-26885630 on Build GRCh38
rs753528862	Chr.5: 26885782-26885782 on Build GRCh38
rs377660998	Chr.5: 26885779-26885779 on Build GRCh38
rs199699428	Chr.5: 26885804-26885804 on Build GRCh38
rs764938167	Chr.5: 26885623-26885623 on Build GRCh38

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