Product Details

Primer Sequences
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Primer Chromosome Location
Chr.16: 10906521-10906780 on Build GRCh38
Format
Each primer will be delivered in a single tube, dried-down
Quick Reference Guide
Primer Designer™ Tool Quick Reference
Ampliseq ID's

Gene Details

Gene Symbol
CIITA
Entrez Gene ID
4261
Gene Name
class II, major histocompatibility complex, transactivator
Gene Aliases
C2TA, CIITAIV, MHC2TA, NLRA
UniGene
Hs.592051
Gene Chromosome Location
Chr.16: 10866208-10941562 on Build GRCh38
Transcripts
NM_000246.3 NM_001286402.1 NM_001286403.1 NR_104444.1 XM_006720880.3 XM_011522484.2 XM_011522485.2 XM_011522486.2 XM_011522487.2 XM_011522488.2 XM_011522489.2 XM_011522490.2 XM_011522491.2 XM_011522492.2 XM_011522493.2 XM_011522494.2 XM_011522495.2 XM_011522496.2

Cosmic Detail

Cosmic ID Mutation AA Transcript Location
4387868 c.1138C>A p.R380R Chr.16: 10906630-10906630 on Build GRCh38
4578653 c.1225C>T p.R409W Chr.16: 10906717-10906717 on Build GRCh38
3377759 c.1198G>A p.V400M Chr.16: 10906690-10906690 on Build GRCh38
2141926 c.1113G>C p.E371D Chr.16: 10906605-10906605 on Build GRCh38
3505742 c.1154C>T p.P385L Chr.16: 10906646-10906646 on Build GRCh38
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SNP Detail

SNP ID Chromosome Location
rs539096456 Chr.16: 10906589-10906589 on Build GRCh38
rs773334233 Chr.16: 10906747-10906747 on Build GRCh38
rs374576307 Chr.16: 10906558-10906558 on Build GRCh38
rs747411244 Chr.16: 10906735-10906735 on Build GRCh38
rs757431582 Chr.16: 10906612-10906620 on Build GRCh38
rs761770874 Chr.16: 10906617-10906617 on Build GRCh38
rs148904933 Chr.16: 10906706-10906706 on Build GRCh38
rs182369772 Chr.16: 10906660-10906660 on Build GRCh38
rs778649467 Chr.16: 10906646-10906646 on Build GRCh38
rs199476069 Chr.16: 10906722-10906722 on Build GRCh38
rs762995873 Chr.16: 10906749-10906749 on Build GRCh38
rs770306852 Chr.16: 10906643-10906643 on Build GRCh38
rs748540952 Chr.16: 10906743-10906743 on Build GRCh38
rs763224509 Chr.16: 10906680-10906680 on Build GRCh38
rs759977402 Chr.16: 10906563-10906563 on Build GRCh38
rs777405510 Chr.16: 10906552-10906552 on Build GRCh38
rs145558777 Chr.16: 10906669-10906669 on Build GRCh38
rs776966289 Chr.16: 10906661-10906661 on Build GRCh38
rs572327540 Chr.16: 10906733-10906733 on Build GRCh38
rs769294144 Chr.16: 10906551-10906551 on Build GRCh38
rs745358587 Chr.16: 10906718-10906718 on Build GRCh38
rs137852602 Chr.16: 10906633-10906633 on Build GRCh38
rs372456158 Chr.16: 10906659-10906659 on Build GRCh38
rs769100548 Chr.16: 10906569-10906569 on Build GRCh38
rs754000556 Chr.16: 10906611-10906611 on Build GRCh38
rs137895901 Chr.16: 10906717-10906717 on Build GRCh38
rs570428236 Chr.16: 10906564-10906564 on Build GRCh38
rs201966261 Chr.16: 10906723-10906723 on Build GRCh38
rs371128355 Chr.16: 10906631-10906631 on Build GRCh38
rs527539420 Chr.16: 10906559-10906559 on Build GRCh38
rs750658139 Chr.16: 10906674-10906674 on Build GRCh38
rs145508828 Chr.16: 10906714-10906714 on Build GRCh38
rs771846946 Chr.16: 10906649-10906649 on Build GRCh38
rs766572360 Chr.16: 10906682-10906682 on Build GRCh38
rs556203901 Chr.16: 10906599-10906599 on Build GRCh38
rs761978819 Chr.16: 10906668-10906668 on Build GRCh38
rs750567359 Chr.16: 10906630-10906630 on Build GRCh38
rs752480407 Chr.16: 10906635-10906635 on Build GRCh38
rs147912483 Chr.16: 10906545-10906545 on Build GRCh38
rs776145930 Chr.16: 10906565-10906565 on Build GRCh38
rs953080654 Chr.16: 10906675-10906675 on Build GRCh38
rs748867171 Chr.16: 10906641-10906641 on Build GRCh38
rs984494067 Chr.16: 10906688-10906688 on Build GRCh38
rs535545291 Chr.16: 10906715-10906715 on Build GRCh38
rs930885758 Chr.16: 10906647-10906647 on Build GRCh38
rs886051638 Chr.16: 10906707-10906707 on Build GRCh38
rs765530997 Chr.16: 10906622-10906622 on Build GRCh38
rs777212471 Chr.16: 10906742-10906742 on Build GRCh38
rs763945523 Chr.16: 10906640-10906640 on Build GRCh38
rs766625949 Chr.16: 10906758-10906758 on Build GRCh38
rs752576726 Chr.16: 10906546-10906546 on Build GRCh38
rs752535345 Chr.16: 10906700-10906700 on Build GRCh38
rs756098713 Chr.16: 10906637-10906637 on Build GRCh38
rs142317834 Chr.16: 10906745-10906745 on Build GRCh38
rs140486686 Chr.16: 10906560-10906560 on Build GRCh38
rs754732155 Chr.16: 10906541-10906541 on Build GRCh38

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