Product Details

Primer Sequences

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Primer Chromosome Location

Chr.7: 27095495-27096094 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

HOTAIRM1

Entrez Gene ID

100506311

Gene Name

HOXA transcript antisense RNA, myeloid-specific 1

Gene Aliases

HOXA-AS1, HOXA1-AS1, NCRNA00179

UniGene

Hs.445239

Gene Chromosome Location

Chr.7: 27096094-27100258 on Build GRCh38

Transcripts

NR_038366.1 NR_038367.1 NM_005522.4 NM_153620.2

Gene Symbol

HOXA1

Entrez Gene ID

3198

Gene Name

homeobox A1

Gene Aliases

BSAS, HOX1, HOX1F

UniGene

Hs.67397

Gene Chromosome Location

Chr.7: 27092993-27096006 on Build GRCh38

Transcripts

NR_038366.1 NR_038367.1 NM_005522.4 NM_153620.2

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
6514828	c.290C>T	p.P97L	Chr.7: 27095623-27095623 on Build GRCh38
6285112	c.265T>G	p.S89A	Chr.7: 27095648-27095648 on Build GRCh38
3880383	c.122C>T	p.A41V	Chr.7: 27095791-27095791 on Build GRCh38
74937	c.47G>C	p.S16T	Chr.7: 27095866-27095866 on Build GRCh38
3880381	c.378C>T	p.C126C	Chr.7: 27095535-27095535 on Build GRCh38
5532382	c.403C>T	p.L135F	Chr.7: 27095510-27095510 on Build GRCh38
1450183	c.87_88insA	p.S30fs*4	Chr.7: 27095825-27095826 on Build GRCh38
3027049	c.407C>T	p.S136L	Chr.7: 27095506-27095506 on Build GRCh38
5807488	c.305A>C	p.Q102P	Chr.7: 27095608-27095608 on Build GRCh38
4168153	c.207_215delCCACCACCA	p.H70_H72delHHH	Chr.7: 27095698-27095706 on Build GRCh38
5737889	c.328C>T	p.P110S	Chr.7: 27095585-27095585 on Build GRCh38
4162117	c.218G>A	p.R73H	Chr.7: 27095695-27095695 on Build GRCh38
6530087	c.223C>G	p.P75A	Chr.7: 27095690-27095690 on Build GRCh38
2155463	c.200A>C	p.H67P	Chr.7: 27095713-27095713 on Build GRCh38
71089	c.398G>A	p.G133E	Chr.7: 27095515-27095515 on Build GRCh38
4614991	c.213_215delCCA	p.H72delH	Chr.7: 27095698-27095700 on Build GRCh38
118379	c.252G>T	p.G84G	Chr.7: 27095661-27095661 on Build GRCh38
5872538	c.371C>T	p.P124L	Chr.7: 27095542-27095542 on Build GRCh38
3027056	c.215_223delATCGCCACC	p.H72_H74delHRH	Chr.7: 27095690-27095698 on Build GRCh38
1088838	c.180G>T	p.Q60H	Chr.7: 27095733-27095733 on Build GRCh38
6854962	c.123G>A	p.A41A	Chr.7: 27095790-27095790 on Build GRCh38
4484369	c.27C>T	p.F9F	Chr.7: 27095886-27095886 on Build GRCh38
1450181	c.226delC	p.Q76fs*38	Chr.7: 27095687-27095687 on Build GRCh38
6177256	c.356T>A	p.V119E	Chr.7: 27095557-27095557 on Build GRCh38
3637707	c.4G>A	p.D2N	Chr.7: 27095909-27095909 on Build GRCh38
1450179	c.334G>A	p.A112T	Chr.7: 27095579-27095579 on Build GRCh38
3637705	c.252G>A	p.G84G	Chr.7: 27095661-27095661 on Build GRCh38
6109651	c.205C>A	p.H69N	Chr.7: 27095708-27095708 on Build GRCh38
4690952	c.281G>T	p.S94I	Chr.7: 27095632-27095632 on Build GRCh38
7252191	c.61G>A	p.G21R	Chr.7: 27095852-27095852 on Build GRCh38
1717543	c.41T>C	p.I14T	Chr.7: 27095872-27095872 on Build GRCh38
3928994	c.284G>A	p.C95Y	Chr.7: 27095629-27095629 on Build GRCh38
6514829	c.129C>T	p.S43S	Chr.7: 27095784-27095784 on Build GRCh38
1568453	c.194A>C	p.H65P	Chr.7: 27095719-27095719 on Build GRCh38
3923433	c.112C>T	p.Q38*	Chr.7: 27095801-27095801 on Build GRCh38
1488496	c.216_218delTCG	p.R73delR	Chr.7: 27095695-27095697 on Build GRCh38
6309473	c.224C>A	p.P75H	Chr.7: 27095689-27095689 on Build GRCh38
3880384	c.91G>A	p.D31N	Chr.7: 27095822-27095822 on Build GRCh38
1450182	c.175delG	p.V59fs*55	Chr.7: 27095738-27095738 on Build GRCh38
3880382	c.146G>A	p.G49D	Chr.7: 27095767-27095767 on Build GRCh38
6280682	c.198C>T	p.H66H	Chr.7: 27095715-27095715 on Build GRCh38
266680	c.121G>A	p.A41T	Chr.7: 27095792-27095792 on Build GRCh38
6681563	c.222C>T	p.H74H	Chr.7: 27095691-27095691 on Build GRCh38
421484	c.126C>T	p.V42V	Chr.7: 27095787-27095787 on Build GRCh38
5645047	c.405C>G	p.L135L	Chr.7: 27095508-27095508 on Build GRCh38
6681561	c.341A>T	p.N114I	Chr.7: 27095572-27095572 on Build GRCh38
4162118	c.213C>T	p.H71H	Chr.7: 27095700-27095700 on Build GRCh38
7157947	c.89C>G	p.S30W	Chr.7: 27095824-27095824 on Build GRCh38
1239083	c.186T>C	p.G62G	Chr.7: 27095727-27095727 on Build GRCh38
4615365	c.215_216insCCA	p.H72_R73insH	Chr.7: 27095697-27095698 on Build GRCh38
6109650	c.123G>T	p.A41A	Chr.7: 27095790-27095790 on Build GRCh38
348113	c.146G>T	p.G49V	Chr.7: 27095767-27095767 on Build GRCh38
5997574	c.43C>A	p.L15I	Chr.7: 27095870-27095870 on Build GRCh38
6864041	c.208C>T	p.H70Y	Chr.7: 27095705-27095705 on Build GRCh38
1088839	c.154C>T	p.R52C	Chr.7: 27095759-27095759 on Build GRCh38
5942134	c.166G>A	p.G56S	Chr.7: 27095747-27095747 on Build GRCh38
1088837	c.221A>G	p.H74R	Chr.7: 27095692-27095692 on Build GRCh38
1450180	c.333C>T	p.Y111Y	Chr.7: 27095580-27095580 on Build GRCh38
5030754	c.194_196delACC	p.H72delH	Chr.7: 27095717-27095719 on Build GRCh38
6255705	c.328C>A	p.P110T	Chr.7: 27095585-27095585 on Build GRCh38
4901739	c.413C>T	p.P138L	Chr.7: 27095500-27095500 on Build GRCh38
1450177	c.412C>T	p.P138S	Chr.7: 27095501-27095501 on Build GRCh38
7324982	c.199C>A	p.H67N	Chr.7: 27095714-27095714 on Build GRCh38
3785077	c.59C>T	p.S20L	Chr.7: 27095854-27095854 on Build GRCh38
1285419	c.258G>T	p.L86L	Chr.7: 27095655-27095655 on Build GRCh38
4828106	c.147C>T	p.G49G	Chr.7: 27095766-27095766 on Build GRCh38
7293302	c.102T>C	p.I34I	Chr.7: 27095811-27095811 on Build GRCh38
3637706	c.165G>A	p.V55V	Chr.7: 27095748-27095748 on Build GRCh38
7234524	c.378C>G	p.C126W	Chr.7: 27095535-27095535 on Build GRCh38
6109652	c.377G>T	p.C126F	Chr.7: 27095536-27095536 on Build GRCh38
3637704	c.260G>A	p.G87E	Chr.7: 27095653-27095653 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs886062262	Chr.7: 27095842-27095842 on Build GRCh38
rs997172905	Chr.7: 27095676-27095676 on Build GRCh38
rs764322837	Chr.7: 27095689-27095690 on Build GRCh38
rs572829050	Chr.7: 27095654-27095654 on Build GRCh38
rs752885733	Chr.7: 27095544-27095544 on Build GRCh38
rs774629222	Chr.7: 27095925-27095926 on Build GRCh38
rs750312129	Chr.7: 27095738-27095738 on Build GRCh38
rs104894018	Chr.7: 27095837-27095837 on Build GRCh38
rs865943119	Chr.7: 27095789-27095789 on Build GRCh38
rs570731900	Chr.7: 27096023-27096023 on Build GRCh38
rs370355386	Chr.7: 27095885-27095885 on Build GRCh38
rs368221577	Chr.7: 27096022-27096022 on Build GRCh38
rs767288977	Chr.7: 27095825-27095825 on Build GRCh38
rs376159031	Chr.7: 27095978-27095978 on Build GRCh38
rs917828771	Chr.7: 27095728-27095728 on Build GRCh38
rs104894017	Chr.7: 27095829-27095829 on Build GRCh38
rs927725372	Chr.7: 27096022-27096022 on Build GRCh38
rs1023408773	Chr.7: 27095980-27095980 on Build GRCh38
rs199540608	Chr.7: 27095944-27095944 on Build GRCh38
rs781616537	Chr.7: 27095848-27095848 on Build GRCh38
rs760765803	Chr.7: 27095678-27095678 on Build GRCh38
rs781331719	Chr.7: 27095694-27095694 on Build GRCh38
rs766431051	Chr.7: 27095537-27095537 on Build GRCh38
rs753969638	Chr.7: 27095698-27095700 on Build GRCh38
rs763704532	Chr.7: 27095950-27095950 on Build GRCh38
rs77832452	Chr.7: 27095739-27095739 on Build GRCh38
rs960142176	Chr.7: 27095970-27095970 on Build GRCh38
rs761654698	Chr.7: 27095730-27095730 on Build GRCh38
rs544314279	Chr.7: 27095690-27095698 on Build GRCh38
rs761181029	Chr.7: 27095534-27095534 on Build GRCh38
rs758237482	Chr.7: 27095697-27095698 on Build GRCh38
rs878979521	Chr.7: 27095737-27095737 on Build GRCh38
rs775236854	Chr.7: 27095863-27095865 on Build GRCh38
rs200922808	Chr.7: 27095793-27095793 on Build GRCh38
rs768796271	Chr.7: 27095704-27095706 on Build GRCh38
rs964954049	Chr.7: 27095998-27095998 on Build GRCh38
rs981104456	Chr.7: 27096002-27096002 on Build GRCh38
rs751378994	Chr.7: 27095729-27095729 on Build GRCh38
rs747464910	Chr.7: 27095698-27095706 on Build GRCh38
rs748952987	Chr.7: 27095704-27095704 on Build GRCh38
rs111580588	Chr.7: 27095577-27095577 on Build GRCh38
rs894460452	Chr.7: 27095655-27095655 on Build GRCh38
rs761162491	Chr.7: 27095651-27095651 on Build GRCh38
rs140318803	Chr.7: 27095818-27095818 on Build GRCh38
rs559987637	Chr.7: 27095724-27095724 on Build GRCh38
rs769077854	Chr.7: 27095911-27095914 on Build GRCh38
rs377149193	Chr.7: 27095619-27095619 on Build GRCh38
rs150376380	Chr.7: 27095834-27095834 on Build GRCh38
rs1021758952	Chr.7: 27095868-27095868 on Build GRCh38
rs886062261	Chr.7: 27095748-27095748 on Build GRCh38
rs765261087	Chr.7: 27095661-27095661 on Build GRCh38
rs762135120	Chr.7: 27095822-27095822 on Build GRCh38
rs146782650	Chr.7: 27095719-27095719 on Build GRCh38
rs746373446	Chr.7: 27095773-27095773 on Build GRCh38
rs372667623	Chr.7: 27095960-27095960 on Build GRCh38
rs747419833	Chr.7: 27095709-27095709 on Build GRCh38
rs533892779	Chr.7: 27095719-27095720 on Build GRCh38
rs950475320	Chr.7: 27096018-27096018 on Build GRCh38
rs768791109	Chr.7: 27095873-27095873 on Build GRCh38
rs904519138	Chr.7: 27096024-27096024 on Build GRCh38
rs749847386	Chr.7: 27095870-27095870 on Build GRCh38
rs370896322	Chr.7: 27095826-27095826 on Build GRCh38
rs867601078	Chr.7: 27095662-27095662 on Build GRCh38
rs776482521	Chr.7: 27095918-27095918 on Build GRCh38
rs773622256	Chr.7: 27095623-27095623 on Build GRCh38
rs764729360	Chr.7: 27095836-27095836 on Build GRCh38
rs773671587	Chr.7: 27095528-27095528 on Build GRCh38
rs575212090	Chr.7: 27095682-27095682 on Build GRCh38
rs754443433	Chr.7: 27095835-27095835 on Build GRCh38
rs374581356	Chr.7: 27095852-27095852 on Build GRCh38
rs533047031	Chr.7: 27096061-27096061 on Build GRCh38
rs368428758	Chr.7: 27095695-27095697 on Build GRCh38
rs777714750	Chr.7: 27095561-27095561 on Build GRCh38
rs371597524	Chr.7: 27095541-27095541 on Build GRCh38
rs759482597	Chr.7: 27095919-27095919 on Build GRCh38
rs754087421	Chr.7: 27096027-27096027 on Build GRCh38
rs772220119	Chr.7: 27095890-27095890 on Build GRCh38
rs745370848	Chr.7: 27095556-27095557 on Build GRCh38
rs778487133	Chr.7: 27095760-27095760 on Build GRCh38
rs780377792	Chr.7: 27095858-27095858 on Build GRCh38
rs372765755	Chr.7: 27095586-27095586 on Build GRCh38
rs898886363	Chr.7: 27095549-27095549 on Build GRCh38
rs752271771	Chr.7: 27095942-27095942 on Build GRCh38
rs758043074	Chr.7: 27095847-27095847 on Build GRCh38
rs779608126	Chr.7: 27095740-27095740 on Build GRCh38
rs906374305	Chr.7: 27095610-27095610 on Build GRCh38
rs754599509	Chr.7: 27095746-27095746 on Build GRCh38
rs376243279	Chr.7: 27095725-27095725 on Build GRCh38
rs199620262	Chr.7: 27095703-27095703 on Build GRCh38
rs920268318	Chr.7: 27096003-27096003 on Build GRCh38
rs769853692	Chr.7: 27095721-27095721 on Build GRCh38
rs45491004	Chr.7: 27096034-27096034 on Build GRCh38
rs752896589	Chr.7: 27095665-27095665 on Build GRCh38
rs370583131	Chr.7: 27095691-27095691 on Build GRCh38
rs373107510	Chr.7: 27095722-27095722 on Build GRCh38
rs146737549	Chr.7: 27095771-27095771 on Build GRCh38
rs878954224	Chr.7: 27096029-27096029 on Build GRCh38
rs367605225	Chr.7: 27095857-27095857 on Build GRCh38
rs762160733	Chr.7: 27095931-27095932 on Build GRCh38
rs1030782280	Chr.7: 27096021-27096021 on Build GRCh38
rs778078126	Chr.7: 27095708-27095708 on Build GRCh38
rs767586523	Chr.7: 27095692-27095697 on Build GRCh38
rs748841201	Chr.7: 27095888-27095890 on Build GRCh38
rs771218252	Chr.7: 27095770-27095770 on Build GRCh38
rs886062260	Chr.7: 27095697-27095697 on Build GRCh38
rs2074398	Chr.7: 27095700-27095700 on Build GRCh38
rs1047520159	Chr.7: 27095596-27095596 on Build GRCh38
rs1033634182	Chr.7: 27095638-27095638 on Build GRCh38
rs769552019	Chr.7: 27095685-27095686 on Build GRCh38
rs773032918	Chr.7: 27095891-27095891 on Build GRCh38
rs989150649	Chr.7: 27096033-27096033 on Build GRCh38
rs983179827	Chr.7: 27096021-27096022 on Build GRCh38
rs750568000	Chr.7: 27095691-27095692 on Build GRCh38
rs199827755	Chr.7: 27095574-27095574 on Build GRCh38
rs10951154	Chr.7: 27095695-27095695 on Build GRCh38
rs757334841	Chr.7: 27095698-27095703 on Build GRCh38
rs774858049	Chr.7: 27095690-27095707 on Build GRCh38
rs770272069	Chr.7: 27095790-27095790 on Build GRCh38
rs777153568	Chr.7: 27095717-27095717 on Build GRCh38
rs1053063606	Chr.7: 27096030-27096030 on Build GRCh38
rs1008225872	Chr.7: 27095859-27095859 on Build GRCh38
rs890518053	Chr.7: 27096032-27096032 on Build GRCh38
rs369218661	Chr.7: 27095567-27095567 on Build GRCh38
rs766226303	Chr.7: 27095914-27095914 on Build GRCh38
rs144288739	Chr.7: 27095762-27095762 on Build GRCh38
rs45602734	Chr.7: 27096026-27096026 on Build GRCh38
rs587777901	Chr.7: 27095698-27095698 on Build GRCh38
rs977912034	Chr.7: 27095689-27095689 on Build GRCh38
rs753327260	Chr.7: 27095743-27095743 on Build GRCh38
rs758708392	Chr.7: 27095673-27095673 on Build GRCh38
rs760336148	Chr.7: 27095893-27095893 on Build GRCh38
rs769152039	Chr.7: 27095737-27095738 on Build GRCh38
rs745429376	Chr.7: 27095700-27095701 on Build GRCh38
rs751466974	Chr.7: 27095680-27095680 on Build GRCh38
rs765543665	Chr.7: 27095543-27095543 on Build GRCh38
rs998940526	Chr.7: 27095921-27095921 on Build GRCh38
rs927780998	Chr.7: 27095775-27095775 on Build GRCh38
rs766274047	Chr.7: 27095832-27095832 on Build GRCh38
rs764712990	Chr.7: 27095938-27095938 on Build GRCh38
rs776550739	Chr.7: 27095657-27095657 on Build GRCh38
rs763176817	Chr.7: 27095796-27095796 on Build GRCh38
rs771305944	Chr.7: 27095715-27095715 on Build GRCh38
rs760625693	Chr.7: 27095828-27095828 on Build GRCh38
rs546435383	Chr.7: 27096066-27096066 on Build GRCh38
rs1022228508	Chr.7: 27095697-27095697 on Build GRCh38
rs774979619	Chr.7: 27095690-27095701 on Build GRCh38
rs968808790	Chr.7: 27095688-27095688 on Build GRCh38
rs969293002	Chr.7: 27095995-27095995 on Build GRCh38
rs768882831	Chr.7: 27095814-27095814 on Build GRCh38
rs775163257	Chr.7: 27095609-27095609 on Build GRCh38
rs886062259	Chr.7: 27095658-27095658 on Build GRCh38
rs748371765	Chr.7: 27095888-27095888 on Build GRCh38
rs1008939351	Chr.7: 27096041-27096041 on Build GRCh38
rs766665411	Chr.7: 27095694-27095695 on Build GRCh38
rs758170303	Chr.7: 27095559-27095559 on Build GRCh38
rs965283358	Chr.7: 27096069-27096069 on Build GRCh38
rs772358886	Chr.7: 27095620-27095620 on Build GRCh38
rs941794162	Chr.7: 27095652-27095652 on Build GRCh38
rs745425180	Chr.7: 27095581-27095581 on Build GRCh38

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