Product Details

Primer Sequences

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Primer Chromosome Location

Chr.6: 29944475-29944728 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

HLA-A

Entrez Gene ID

3105

Gene Name

major histocompatibility complex, class I, A

Gene Aliases

Aw-33, Aw-74, HLA-A11, HLA-A33, HLA-DQB1, HLA-DRB1, HLAA

UniGene

Hs.181244

Gene Chromosome Location

Chr.6: 29942470-29945884 on Build GRCh38

Transcripts

NM_001242758.1 NM_002116.7

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
1442960	c.1005G>C	p.K335N	Chr.6: 29944609-29944609 on Build GRCh38
4593663	c.967A>G	p.T323A	Chr.6: 29944571-29944571 on Build GRCh38
6939511	c.948_964del17	p.L317fs*23	Chr.6: 29944552-29944568 on Build GRCh38
4824456	c.896-1G>C	p.?	Chr.6: 29944499-29944499 on Build GRCh38
6963835	c.905C>T	p.S302F	Chr.6: 29944509-29944509 on Build GRCh38
6217733	c.910C>G	p.P304A	Chr.6: 29944514-29944514 on Build GRCh38
3861342	c.971G>C	p.G324A	Chr.6: 29944575-29944575 on Build GRCh38
6963834	c.905C>T	p.S302F	Chr.6: 29944509-29944509 on Build GRCh38
4690615	c.1001G>C	p.R334T	Chr.6: 29944605-29944605 on Build GRCh38
4595407	c.934A>C	p.I312L	Chr.6: 29944538-29944538 on Build GRCh38
1442958	c.951C>A	p.L317L	Chr.6: 29944555-29944555 on Build GRCh38
6936714	c.909_1013-47del500	p.?	Chr.6: 29944513-29945012 on Build GRCh38
5021008	c.900G>A	p.L300L	Chr.6: 29944504-29944504 on Build GRCh38
4160533	c.964A>T	p.I322F	Chr.6: 29944568-29944568 on Build GRCh38
5019200	c.952C>T	p.L318F	Chr.6: 29944556-29944556 on Build GRCh38
4160535	c.987C>T	p.A329A	Chr.6: 29944591-29944591 on Build GRCh38
6979788	c.925G>A	p.V309M	Chr.6: 29944529-29944529 on Build GRCh38
3761777	c.952C>T	p.L318F	Chr.6: 29944556-29944556 on Build GRCh38
5019030	c.1017A>G	p.G339G	Chr.6: 29944621-29944621 on Build GRCh38
4003871	c.900G>A	p.L300L	Chr.6: 29944504-29944504 on Build GRCh38
4690612	c.951delC	p.G319fs*3	Chr.6: 29944555-29944555 on Build GRCh38
1621365	c.992T>G	p.M331R	Chr.6: 29944596-29944596 on Build GRCh38
5178218	c.951C>A	p.L317L	Chr.6: 29944555-29944555 on Build GRCh38
5019483	c.945G>A	p.L315L	Chr.6: 29944549-29944549 on Build GRCh38
6939510	c.948_964del17	p.L317fs*17	Chr.6: 29944552-29944568 on Build GRCh38
4596360	c.992T>G	p.M331R	Chr.6: 29944596-29944596 on Build GRCh38
1442959	c.956G>T	p.G319V	Chr.6: 29944560-29944560 on Build GRCh38
6964674	c.921_922insA	p.I308fs*32	Chr.6: 29944525-29944526 on Build GRCh38
6964675	c.921_922insA	p.I308fs*38	Chr.6: 29944525-29944526 on Build GRCh38
7371250	c.1001G>A	p.R334K	Chr.6: 29944605-29944605 on Build GRCh38
6966330	c.909delG	p.Q303fs*19	Chr.6: 29944513-29944513 on Build GRCh38
6966331	c.909delG	p.Q303fs*19	Chr.6: 29944513-29944513 on Build GRCh38
5079437	c.903T>G	p.S301S	Chr.6: 29944507-29944507 on Build GRCh38
6936715	c.909_1031-47del500	p.?	Chr.6: 29944513-29945012 on Build GRCh38
5019350	c.916A>G	p.I306V	Chr.6: 29944520-29944520 on Build GRCh38
4595413	c.964A>T	p.I322F	Chr.6: 29944568-29944568 on Build GRCh38
5019482	c.945G>A	p.L315L	Chr.6: 29944549-29944549 on Build GRCh38
4690613	c.951delC	p.G319fs*3	Chr.6: 29944555-29944555 on Build GRCh38
4160537	c.1024G>A	p.V342M	Chr.6: 29944628-29944628 on Build GRCh38
3430447	c.903T>G	p.S301S	Chr.6: 29944507-29944507 on Build GRCh38
4160536	c.1012+5A>G	p.?	Chr.6: 29944621-29944621 on Build GRCh38
3829976	c.934A>C	p.I312L	Chr.6: 29944538-29944538 on Build GRCh38
6217734	c.910C>G	p.P304A	Chr.6: 29944514-29944514 on Build GRCh38
5019202	c.987C>T	p.A329A	Chr.6: 29944591-29944591 on Build GRCh38
4160532	c.961G>A	p.V321M	Chr.6: 29944565-29944565 on Build GRCh38
5178220	c.964A>G	p.I322V	Chr.6: 29944568-29944568 on Build GRCh38
5019242	c.1005G>C	p.K335N	Chr.6: 29944609-29944609 on Build GRCh38
4160534	c.967A>G	p.T323A	Chr.6: 29944571-29944571 on Build GRCh38
4606256	c.1026G>T	p.V342V	Chr.6: 29944630-29944630 on Build GRCh38
6979787	c.925G>A	p.V309M	Chr.6: 29944529-29944529 on Build GRCh38
4160531	c.899T>C	p.L300P	Chr.6: 29944503-29944503 on Build GRCh38
6946753	c.928G>A	p.G310S	Chr.6: 29944532-29944532 on Build GRCh38
6946752	c.928G>A	p.G310S	Chr.6: 29944532-29944532 on Build GRCh38
4003872	c.916A>G	p.I306V	Chr.6: 29944520-29944520 on Build GRCh38
6947783	c.929G>A	p.G310D	Chr.6: 29944533-29944533 on Build GRCh38
6947782	c.929G>A	p.G310D	Chr.6: 29944533-29944533 on Build GRCh38
6945452	c.1012+1G>T	p.?	Chr.6: 29944617-29944617 on Build GRCh38
6945453	c.1013G>T	p.G338V	Chr.6: 29944617-29944617 on Build GRCh38
5178219	c.956G>T	p.G319V	Chr.6: 29944560-29944560 on Build GRCh38
4690614	c.1001G>C	p.R334T	Chr.6: 29944605-29944605 on Build GRCh38
5019837	c.1029G>A	p.K343K	Chr.6: 29944633-29944633 on Build GRCh38
227006	c.919C>T	p.P307S	Chr.6: 29944523-29944523 on Build GRCh38
741496	c.896-1G>C	p.?	Chr.6: 29944499-29944499 on Build GRCh38
7371251	c.1001G>A	p.R334K	Chr.6: 29944605-29944605 on Build GRCh38
5019477	c.899T>C	p.L300P	Chr.6: 29944503-29944503 on Build GRCh38
4825018	c.961G>A	p.V321M	Chr.6: 29944565-29944565 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs1141891	Chr.6: 29944591-29944591 on Build GRCh38
rs45519641	Chr.6: 29944496-29944496 on Build GRCh38
rs9260195	Chr.6: 29944686-29944686 on Build GRCh38
rs41558618	Chr.6: 29944524-29944524 on Build GRCh38
rs3180278	Chr.6: 29944568-29944568 on Build GRCh38
rs778494996	Chr.6: 29944619-29944624 on Build GRCh38
rs775803357	Chr.6: 29944639-29944639 on Build GRCh38
rs9278466	Chr.6: 29944637-29944637 on Build GRCh38
rs41550912	Chr.6: 29944560-29944560 on Build GRCh38
rs41555922	Chr.6: 29944528-29944528 on Build GRCh38
rs779828907	Chr.6: 29944553-29944553 on Build GRCh38
rs41550119	Chr.6: 29944605-29944605 on Build GRCh38
rs41554316	Chr.6: 29944538-29944538 on Build GRCh38
rs45610038	Chr.6: 29944639-29944639 on Build GRCh38
rs781683636	Chr.6: 29944685-29944685 on Build GRCh38
rs9280793	Chr.6: 29944622-29944623 on Build GRCh38
rs41551619	Chr.6: 29944633-29944633 on Build GRCh38
rs200050592	Chr.6: 29944527-29944527 on Build GRCh38
rs769867004	Chr.6: 29944638-29944638 on Build GRCh38
rs773279563	Chr.6: 29944646-29944646 on Build GRCh38
rs11539965	Chr.6: 29944567-29944567 on Build GRCh38
rs3179982	Chr.6: 29944556-29944556 on Build GRCh38
rs761593088	Chr.6: 29944529-29944529 on Build GRCh38
rs9260191	Chr.6: 29944621-29944621 on Build GRCh38
rs778233747	Chr.6: 29944625-29944625 on Build GRCh38
rs74408957	Chr.6: 29944617-29944617 on Build GRCh38
rs116046290	Chr.6: 29944602-29944602 on Build GRCh38
rs9260196	Chr.6: 29944696-29944696 on Build GRCh38
rs370824210	Chr.6: 29944640-29944640 on Build GRCh38
rs772031233	Chr.6: 29944642-29944642 on Build GRCh38
rs773946546	Chr.6: 29944586-29944586 on Build GRCh38
rs1137160	Chr.6: 29944609-29944609 on Build GRCh38
rs879033585	Chr.6: 29944636-29944637 on Build GRCh38
rs746131702	Chr.6: 29944575-29944575 on Build GRCh38
rs758734401	Chr.6: 29944679-29944679 on Build GRCh38
rs201507150	Chr.6: 29944619-29944619 on Build GRCh38
rs45453496	Chr.6: 29944498-29944498 on Build GRCh38
rs1059896	Chr.6: 29944565-29944565 on Build GRCh38
rs45540334	Chr.6: 29944499-29944499 on Build GRCh38
rs1059846	Chr.6: 29944549-29944549 on Build GRCh38
rs45541539	Chr.6: 29944497-29944497 on Build GRCh38
rs143166124	Chr.6: 29944618-29944618 on Build GRCh38
rs753586260	Chr.6: 29944555-29944555 on Build GRCh38
rs760754899	Chr.6: 29944647-29944647 on Build GRCh38
rs1136903	Chr.6: 29944503-29944503 on Build GRCh38
rs1136949	Chr.6: 29944520-29944520 on Build GRCh38
rs9260197	Chr.6: 29944700-29944700 on Build GRCh38
rs1136917	Chr.6: 29944504-29944504 on Build GRCh38
rs770064269	Chr.6: 29944585-29944585 on Build GRCh38
rs775938606	Chr.6: 29944665-29944665 on Build GRCh38
rs767493646	Chr.6: 29944531-29944531 on Build GRCh38
rs747654166	Chr.6: 29944635-29944636 on Build GRCh38
rs1137078	Chr.6: 29944571-29944571 on Build GRCh38
rs777825089	Chr.6: 29944637-29944638 on Build GRCh38
rs551910414	Chr.6: 29944650-29944650 on Build GRCh38
rs9260194	Chr.6: 29944680-29944680 on Build GRCh38
rs1137110	Chr.6: 29944596-29944596 on Build GRCh38
rs748560158	Chr.6: 29944563-29944563 on Build GRCh38
rs376806238	Chr.6: 29944618-29944619 on Build GRCh38
rs758815292	Chr.6: 29944622-29944622 on Build GRCh38
rs767513288	Chr.6: 29944593-29944593 on Build GRCh38
rs745961908	Chr.6: 29944635-29944635 on Build GRCh38
rs376591124	Chr.6: 29944513-29944513 on Build GRCh38
rs756267046	Chr.6: 29944694-29944694 on Build GRCh38
rs554587009	Chr.6: 29944681-29944681 on Build GRCh38
rs766054966	Chr.6: 29944606-29944606 on Build GRCh38
rs747579566	Chr.6: 29944626-29944626 on Build GRCh38
rs9260192	Chr.6: 29944628-29944628 on Build GRCh38
rs9260193	Chr.6: 29944674-29944674 on Build GRCh38
rs778286921	Chr.6: 29944566-29944566 on Build GRCh38
rs183484257	Chr.6: 29944703-29944703 on Build GRCh38
rs35946537	Chr.6: 29944503-29944504 on Build GRCh38

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