Shop All DNA Sequencing Systems

Height (English) Exterior


Height (Metric) Exterior


Length (English) Exterior


Length (Metric) Exterior


Length (Metric) Gel


Volume (Metric) Buffer


Width (English) Exterior


Width (Metric) Exterior


Width (Metric) Gel

GeneMapper™ ID-X Software v1.4, Client Installation Thermo Scientific™

This product includes a single GeneMapper ID-X Software v1.4 Client Installation (no database) and license. Documentation is included.

GeneMapper ID-X Software is an automated genotyping software solution for all data analysis needs, including forensic casework, databasing, and paternity testing. GeneMapper ID-X Software supports a multi-user database configuration and provides a set of data analysis and sample review tools that streamline sizing, allele calling, mixture analysis, and statistical calculations. The software offers a comprehensive quality value system that can be optimized and validated for use in both Expert System and traditional data analysis workflows. The software supports genotyping applications on the ABI PRISM 310, 3100, 3100-Avant, Applied Biosystems 3130, 3130xl, 3500, 3500xL genetic analyzers and Applied Biosystems 3730 DNA Analyzer.

Learn more about GeneMapper ID-X Software

Features in the latest GeneMapper ID-X Software, Version 1.4, include:

• Microsoft Windows 7 and XP compatibility
• Analysis of data generated with the GlobalFiler or GlobalFiler Express PCR amplification kits, as well as all AmpFℓSTR PCR amplification kits
• Enhanced data assessment functionality (Expert System and Expert Assistant features)
--Spike detection disable/enable—Automated spike detection functionality has been enhanced to allow you to disable or enable spike detection for samples and controls.
--Y-marker analysis—In addition to the ability to analyze autosomal STR and Y-STR data separately, GeneMapper ID-X Software v1.4 can analyze autosomal and Y-STR markers in one multiplexed sample. To evaluate the quality of Y-marker data, several new data quality assessment tools have been added including: a sample-level PQV, Amelogenin Cross Check (ACC), and a maximum Y-marker Allele Number (AN) PQV.

• Define new sample path for .hid files—Allows you to view raw data, view EPT data, or reanalyze samples when .hid sample files (generated on 3500 Series Genetic Analyzers) have been moved from their original location

Overview of GeneMapper ID-X Software:
• Powerful, easy to use data analysis tool designed to increase lab productivity
• Comprehensive Expert System capability for analysis of forensic databasing samples delivered by automated data assessment functionality and efficient manual review tools
• Complete Expert Assistant solution for analysis of forensic casework samples combining an efficient suite of manual review features with an integrated mixture analysis tool
• Quality control functionality allows rapid allele match comparisons and concordance searches within a data set
• Extensive security, auditing, and e-signature capabilities help protect data integrity and control technical records
• Multi-user database configuration stores your projects in a central location and facilitates information exchange
• Command Line Interface—the ability to access GeneMapper ID-X Software automatically (without human intervention) streamlines its integration with LIMS installations and other applications in an existing laboratory infrastructure

Automated Data Assessment
GeneMapper ID-X Software was designed specifically to fulfill the requirements of both Expert System and Expert Assistant software. A combination of sophisticated automated data assessment processes and efficient manual review tools deliver comprehensive expert system capability. This provides optimal interaction between the analyst and the data, significantly reducing the amount of analysis time required for single source samples. New features such as the Analysis Requirements check, Allelic Ladder Quality Assessment, Improved Quality Value System, and the Analysis Summary analyze samples and segregate them into pass or review categories based on your thresholds. Once segregated, you can easily conduct any necessary manual review of samples.

Despite its capabilities to automate and streamline the analysis of single source samples, an Expert System is as yet unable to make the final analysis decision for most forensic casework samples and in particular for those containing mixtures. GeneMapper ID-X Software harnesses the automated, rule-based, subject-specific knowledge to act as an Expert Assistant to the forensic analyst, simplifying much of the analysis process and empowering the analyst to make key interpretation decisions. A mixture analysis tool determines the number of contributors to a mixture and efficiently manages the resulting possible genotypes. This enables the forensic analyst to interpret mixtures and generate accurate statistical calculations.

Manual Tools Improve Data Review
Data analysis efficiencies offered by the automated data review processes have been further enhanced through the introduction of a new suite of manual review tools. These developments focus around the plot window providing quick and easy access to all aspects of the data, thus simplifying the data review process. Colored marker header bars indicate which markers within a sample have failed to meet the user defined thresholds and the new Process Quality Value (PQV) Details window details which flags have been fired and how much the observed value differs from the threshold. In addition, expanded labeling options are available to distinguish alleles from artifacts and reviewers can directly access raw data for further troubleshooting. Electronic/peer review of the data is enhanced with the review and manual acceptance of marker and sample level PQVs along with a detailed label edit table display.

For further troubleshooting, reviewers can also directly access raw data. The ability to review and manually accept markers and sample-level PQVs in a detailed label edit table display enhances electronic/peer data review.

A Complete, Verified System
GeneMapper ID-X Software is an integral component of our complete system of instruments, reagents, software, and services for human-identity applications. It has undergone extensive verification testing to ensure robust design features, performance, and reproducibility. When you partner with us, you gain access to the most extensive Human Identification resource network in the industry. Our dedicated team of industry-leading experts—with extensive forensic product development experience—worked closely with the forensic community to develop GeneMapper ID-X Software. The software is part of a system that is supported by on-site technical assistance from skilled Field Applications Support Scientists and Field Service Engineers.

ASSY, Sample Collector .50LD Z Applied Biosystems™

This is a spare part for the 310 Genetic Analyzer.

For Research Use Only. Not for use in diagnostics procedures.

GeneMapper™ ID-X Software v1.4, Full Upgrade Thermo Scientific™

This product includes a GeneMapper ID-X v1.4 Full Upgrade DVD to upgrade previous Full Installation versions of GeneMapper ID-X. Documentation is not included.

GeneMapper ID-X Software is an automated genotyping software solution for all data analysis needs, including forensic casework, databasing, and paternity testing. GeneMapper ID-X Software supports a multi-user database configuration and provides a set of data analysis and sample review tools that streamline sizing, allele calling, mixture analysis, and statistical calculations. The software offers a comprehensive quality value system that can be optimized and validated for use in both Expert System and traditional data analysis workflows. The software supports genotyping applications on the ABI PRISM 310, 3100, 3100-Avant, Applied Biosystems 3130, 3130xl, 3500, 3500xL genetic analyzers and Applied Biosystems 3730 DNA Analyzer.

Learn more about GeneMapper ID-X Software

Features in the latest GeneMapper ID-X Software, Version 1.4, include:

• Microsoft Windows 7 and XP compatibility
• Analysis of data generated with the GlobalFiler or GlobalFiler Express PCR amplification kits, as well as all AmpFℓSTR PCR amplification kits
• Enhanced data assessment functionality (Expert System and Expert Assistant features)
--Spike detection disable/enable—Automated spike detection functionality has been enhanced to allow you to disable or enable spike detection for samples and controls.
--Y-marker analysis—In addition to the ability to analyze autosomal STR and Y-STR data separately, GeneMapper ID-X Software v1.4 can analyze autosomal and Y-STR markers in one multiplexed sample. To evaluate the quality of Y-marker data, several new data quality assessment tools have been added including: a sample-level PQV, Amelogenin Cross Check (ACC), and a maximum Y-marker Allele Number (AN) PQV.

• Define new sample path for .hid files—Allows you to view raw data, view EPT data, or reanalyze samples when .hid sample files (generated on 3500 Series Genetic Analyzers) have been moved from their original location

Overview of GeneMapper ID-X Software:
• Powerful, easy to use data analysis tool designed to increase lab productivity
• Comprehensive Expert System capability for analysis of forensic databasing samples delivered by automated data assessment functionality and efficient manual review tools
• Complete Expert Assistant solution for analysis of forensic casework samples combining an efficient suite of manual review features with an integrated mixture analysis tool
• Quality control functionality allows rapid allele match comparisons and concordance searches within a data set
• Extensive security, auditing, and e-signature capabilities help protect data integrity and control technical records
• Multi-user database configuration stores your projects in a central location and facilitates information exchange
• Command Line Interface—the ability to access GeneMapper ID-X Software automatically (without human intervention) streamlines its integration with LIMS installations and other applications in an existing laboratory infrastructure

Automated Data Assessment
GeneMapper ID-X Software was designed specifically to fulfill the requirements of both Expert System and Expert Assistant software. A combination of sophisticated automated data assessment processes and efficient manual review tools deliver comprehensive expert system capability. This provides optimal interaction between the analyst and the data, significantly reducing the amount of analysis time required for single source samples. New features such as the Analysis Requirements check, Allelic Ladder Quality Assessment, Improved Quality Value System, and the Analysis Summary analyze samples and segregate them into pass or review categories based on your thresholds. Once segregated, you can easily conduct any necessary manual review of samples.

Despite its capabilities to automate and streamline the analysis of single source samples, an Expert System is as yet unable to make the final analysis decision for most forensic casework samples and in particular for those containing mixtures. GeneMapper ID-X Software harnesses the automated, rule-based, subject-specific knowledge to act as an Expert Assistant to the forensic analyst, simplifying much of the analysis process and empowering the analyst to make key interpretation decisions. A mixture analysis tool determines the number of contributors to a mixture and efficiently manages the resulting possible genotypes. This enables the forensic analyst to interpret mixtures and generate accurate statistical calculations.

Manual Tools Improve Data Review
Data analysis efficiencies offered by the automated data review processes have been further enhanced through the introduction of a new suite of manual review tools. These developments focus around the plot window providing quick and easy access to all aspects of the data, thus simplifying the data review process. Colored marker header bars indicate which markers within a sample have failed to meet the user defined thresholds and the new Process Quality Value (PQV) Details window details which flags have been fired and how much the observed value differs from the threshold. In addition, expanded labeling options are available to distinguish alleles from artifacts and reviewers can directly access raw data for further troubleshooting. Electronic/peer review of the data is enhanced with the review and manual acceptance of marker and sample level PQVs along with a detailed label edit table display.

For further troubleshooting, reviewers can also directly access raw data. The ability to review and manually accept markers and sample-level PQVs in a detailed label edit table display enhances electronic/peer data review.

A Complete, Verified System
GeneMapper ID-X Software is an integral component of our complete system of instruments, reagents, software, and services for human-identity applications. It has undergone extensive verification testing to ensure robust design features, performance, and reproducibility. When you partner with us, you gain access to the most extensive Human Identification resource network in the industry. Our dedicated team of industry-leading experts—with extensive forensic product development experience—worked closely with the forensic community to develop GeneMapper ID-X Software. The software is part of a system that is supported by on-site technical assistance from skilled Field Applications Support Scientists and Field Service Engineers.

Ion GeneStudio™ S5 Prime System Extended Warranty Package Ion Torrent™

The Ion GeneStudio S5 Prime System is a semiconductor-based next-generation sequencing (NGS) system that enables simple targeted sequencing workflows. For core and service labs requiring maximum throughput and rapid turnaround time from a benchtop NGS system, the Ion GeneStudio S5 Prime System enables unparalleled breadth and depth, from large panels or exomes to clinical oncology research focused on low allele frequency applications. Combining an extended warranty with your system purchase helps extend the life of your investment.

This package includes the Ion GeneStudio S5 Prime System, SmartStart orientation, and an extended warranty. Key features include:
• Select the chip (Ion 510–550 chip) that fits your application and throughput needs to achieve from 2–130 million reads per run
• Reduce setup time and complexity with cartridge-based plug-and-play reagents
• Complete run and analysis in hours and move forward with your experiments
• Increase efficiency and become operational faster with SmartStart orientation
• Receive fast repair from certified service engineers
• Minimize instrument downtime by troubleshooting with experienced Technical Support teams

For detailed instrument information and specifications, see the Ion GeneStudio S5 Prime System.

Get up and running quickly with SmartStart
SmartStart orientation is carried out by a Field Application Scientist (FAS) to get you up and running quickly in your lab and reduce downtime. SmartStart is the first step of your education journey and is designed to help you work smarter and with greater efficiency. It includes:
• 1-day technology overview and instrument workflow
• 1-day hands-on application workflow training
• 10 hours bioinformatics consultancy

Content will vary depending on your level of knowledge and experience.

Extended warranty plan
Add coverage to your existing manufacturer’s limited warranty with an extended warranty. Each extended warranty includes a planned maintenance visit. Should your instrument require a repair, the extended warranty coverage includes parts, labor, and travel at no additional cost. In addition, you’ll receive:
• On-site guaranteed 2-day response time*
• Scheduled on-site planned maintenance (PM)
• Priority access to Remote Service Engineers

Certain exclusions apply. Contact your Services and Support Representative for details at service.sales@thermofisher.com.

*Availability limited in some geographical areas.

Applied Biosystems™ RapidHIT™ ID System Applied Biosystems™

The Applied Biosystems RapidHIT ID System is a fast and simple-to-use instrument that produces trusted lab-quality forensic DNA profiles in 90 minutes. The system integrates sample preparation and capillary electrophoresis to generate DNA profiles that are aggregated within Applied Biosystems RapidLINK Software for direct upload to the database of choice or for further review and analysis.

The RapidHIT ID System delivers the reliable, reproducible, high-quality data you have come to expect from the Applied Biosystems brand. This system is for use with Applied Biosystems RapidLINK Software v1.0 and its v1.0 applications.

Features of the Applied Biosystems RapidHIT ID System include:
• Fast 90-minute system run time
• 1-minute hands-on time with integrated sample cartridge
• Consumables tracking through radio frequency identification (RFID)
• Intuitive touchscreen interface
• Facial recognition and barcode camera
• Fingerprint reader
• Up to six months of on-instrument time for the primary cartridge with refrigeration mechanism
• Expert system-capable
• Sample/data accessioning workflow-capable

GeneMapper™ ID-X Software v1.4, Demo Thermo Scientific™

This product includes a single GeneMapper ID-X Software v1.4 Full Installation (including database) and a license that expires after 60 days. Documentation is included.

GeneMapper ID-X Software is an automated genotyping software solution for all data analysis needs, including forensic casework, databasing, and paternity testing. GeneMapper ID-X Software supports a multi-user database configuration and provides a set of data analysis and sample review tools that streamline sizing, allele calling, mixture analysis, and statistical calculations. The software offers a comprehensive quality value system that can be optimized and validated for use in both Expert System and traditional data analysis workflows. The software supports genotyping applications on the ABI PRISM 310, 3100, 3100-Avant, Applied Biosystems 3130, 3130xl, 3500, 3500xL genetic analyzers and Applied Biosystems 3730 DNA Analyzer.

Learn more about GeneMapper ID-X Software

Features in the latest GeneMapper ID-X Software, Version 1.4, include:

• Microsoft Windows 7 and XP compatibility
• Analysis of data generated with the GlobalFiler or GlobalFiler Express PCR amplification kits, as well as all AmpFℓSTR PCR amplification kits
• Enhanced data assessment functionality (Expert System and Expert Assistant features)
--Spike detection disable/enable—Automated spike detection functionality has been enhanced to allow you to disable or enable spike detection for samples and controls.
--Y-marker analysis—In addition to the ability to analyze autosomal STR and Y-STR data separately, GeneMapper ID-X Software v1.4 can analyze autosomal and Y-STR markers in one multiplexed sample. To evaluate the quality of Y-marker data, several new data quality assessment tools have been added including: a sample-level PQV, Amelogenin Cross Check (ACC), and a maximum Y-marker Allele Number (AN) PQV.

• Define new sample path for .hid files—Allows you to view raw data, view EPT data, or reanalyze samples when .hid sample files (generated on 3500 Series Genetic Analyzers) have been moved from their original location

Overview of GeneMapper ID-X Software:
• Powerful, easy to use data analysis tool designed to increase lab productivity
• Comprehensive Expert System capability for analysis of forensic databasing samples delivered by automated data assessment functionality and efficient manual review tools
• Complete Expert Assistant solution for analysis of forensic casework samples combining an efficient suite of manual review features with an integrated mixture analysis tool
• Quality control functionality allows rapid allele match comparisons and concordance searches within a data set
• Extensive security, auditing, and e-signature capabilities help protect data integrity and control technical records
• Multi-user database configuration stores your projects in a central location and facilitates information exchange
• Command Line Interface—the ability to access GeneMapper ID-X Software automatically (without human intervention) streamlines its integration with LIMS installations and other applications in an existing laboratory infrastructure

Automated Data Assessment
GeneMapper ID-X Software was designed specifically to fulfill the requirements of both Expert System and Expert Assistant software. A combination of sophisticated automated data assessment processes and efficient manual review tools deliver comprehensive expert system capability. This provides optimal interaction between the analyst and the data, significantly reducing the amount of analysis time required for single source samples. New features such as the Analysis Requirements check, Allelic Ladder Quality Assessment, Improved Quality Value System, and the Analysis Summary analyze samples and segregate them into pass or review categories based on your thresholds. Once segregated, you can easily conduct any necessary manual review of samples.

Despite its capabilities to automate and streamline the analysis of single source samples, an Expert System is as yet unable to make the final analysis decision for most forensic casework samples and in particular for those containing mixtures. GeneMapper ID-X Software harnesses the automated, rule-based, subject-specific knowledge to act as an Expert Assistant to the forensic analyst, simplifying much of the analysis process and empowering the analyst to make key interpretation decisions. A mixture analysis tool determines the number of contributors to a mixture and efficiently manages the resulting possible genotypes. This enables the forensic analyst to interpret mixtures and generate accurate statistical calculations.

Manual Tools Improve Data Review
Data analysis efficiencies offered by the automated data review processes have been further enhanced through the introduction of a new suite of manual review tools. These developments focus around the plot window providing quick and easy access to all aspects of the data, thus simplifying the data review process. Colored marker header bars indicate which markers within a sample have failed to meet the user defined thresholds and the new Process Quality Value (PQV) Details window details which flags have been fired and how much the observed value differs from the threshold. In addition, expanded labeling options are available to distinguish alleles from artifacts and reviewers can directly access raw data for further troubleshooting. Electronic/peer review of the data is enhanced with the review and manual acceptance of marker and sample level PQVs along with a detailed label edit table display.

For further troubleshooting, reviewers can also directly access raw data. The ability to review and manually accept markers and sample-level PQVs in a detailed label edit table display enhances electronic/peer data review.

A Complete, Verified System
GeneMapper ID-X Software is an integral component of our complete system of instruments, reagents, software, and services for human-identity applications. It has undergone extensive verification testing to ensure robust design features, performance, and reproducibility. When you partner with us, you gain access to the most extensive Human Identification resource network in the industry. Our dedicated team of industry-leading experts—with extensive forensic product development experience—worked closely with the forensic community to develop GeneMapper ID-X Software. The software is part of a system that is supported by on-site technical assistance from skilled Field Applications Support Scientists and Field Service Engineers.

Pathatrix™ Auto Cartridge Holder Applied Biosystems™

The Pathatrix® Auto Cartridge Holder is designed for use with the Pathatrix® Auto Instrument, and holds a single Cartridge. The holder provides a steady base that simplifies loading and unloading of the plastic consumable kits into and out of the Cartridge.

Oncomine™ Immune Response Research Assay Ion Torrent™

The Oncomine™ Immune Response Research Assay is a targeted gene expression assay designed for the Ion™ next-generation sequencing (NGS) platform. This pan-cancer gene expression assay is designed to interrogate the tumor microenvironment to enable mechanistic studies and identification of predictive biomarkers for immunotherapy in retrospective or prospective clinical trial research cohorts. The assay is optimized to measure the expression of genes involved in tumor-immune interactions, including the low-expressing genes involved in inflammatory signaling.

This assay contains the reagents for manual library construction and a single pool of primers used to perform multiplex PCR for preparation of amplicon libraries from formalin-fixed paraffin-embedded (FFPE) samples. The assay enables quantitative evaluation of the expression of markers associated with different leukocyte subsets, antigen presentation, checkpoint pathways, and tumor progression. This 400-gene assay is supported with a user-friendly informatics workflow and demonstrates high sensitivity for low-expressing transcripts derived from FFPE samples (request a gene list). The Oncomine Immune Response Research Assay leverages Ion AmpliSeq™ technology to deliver results from as little as 10 ng of total RNA, enabling robust performance from challenging FFPE samples.

Assay workflow
The Oncomine Immune Response Research Assay manual workflow features high sample multiplexing on Ion S5™ and Ion PGM™ sequencing systems. The entire workflow, from sample extraction to results, can be completed in less than 48 hours. Note: An alternate assay is available (Cat. No. A32928) for the preparation of Ion AmpliSeq libraries in automated mode through use of an Ion Chef™ System.

Assay performance
• High repeatability and sensitive detection of gene expression across different types of solid tumors
• Low sample input requirement (10 ng of total RNA material)
• High sensitivity detection of low-expressing signaling molecules such as interleukins and interferon gamma
• High sample multiplexing with flexibility to run 8 samples per single run
• Efficient workflow that offers sample-to-results in less than 48 hours
• Automated and seamlessly integrated analysis solution
• Interpretation of immune surveillance and tumor progression mechanism with functional annotation of genes and pathways

Informatics
The Oncomine Immune Response Research Assay comes with optimized informatics and visualization software that minimizes the complexity of data analysis. The analysis workflow consists of a data exploration component automated by the Immune Response Torrent Suite™ Plug-in and a two-group differential analysis provided by the Affymetrix™ Transcriptome Analysis Console (TAC). Together these tools offer a streamlined process for common gene expression analyses and exportable data files that are amenable to further exploration with other third-party software. Specifically, these tools provide:
• QC metrics and expression of housekeeping genes to qualify data
• Hierarchical clustering of samples with user-defined gene sets or by all genes on the panel
• Visualization with PCA, heatmaps, and gene expression distribution plots
• Sample correlation using rich correlation plots
• Fold-change estimates in easy-to-use tabular data format (TAC)
• Volcano plots to visualize differentially genes (TAC)

Oncomine™ Tumor Mutation Load Assay, manual library preparation Ion Torrent™

The Oncomine Tumor Mutation Load Assay is a targeted next-generation sequencing (NGS) assay that provides an assessment of tumor mutation load and mutation signatures in a simple workflow. The assay provides reagents for library construction from two pools of multiplex PCR primers for preparation of amplicon libraries from formalin-fixed paraffin-embedded (FFPE) tumor samples without the need for a matched normal sample, using 10 ng of DNA per primer pool. This assay is designed to facilitate successful selection and identification of samples most likely to derive responses in cancer immunotherapy research.

Features:
• Enables accurate quantitation of somatic mutations to assess tumor mutation load
• Single tumor sample workflow reduces the need for a matched normal sample
• Efficient amplification from challenging samples with AmpliSeq technology
• Streamlined analysis with feature-rich visualization
• Efficient multiplexing of up to eight samples per Ion 540 Chip on the Ion S5 Systems

The Oncomine Tumor Mutation Load Assay, Manual Library Preparation, includes panel primers and reagents for library construction sufficient for 24 samples. The libraries are compatible with automated template preparation and chip loading on the Ion Chef System. For automated library preparation using the Ion Chef System, please see Cat. No. A37910.

From sample to answer
The Oncomine Tumor Mutation Load Assay comes with optimized informatics and visualization software that provides a sample-to-answer solution. Run metrics can be assessed using a Torrent Suite plugin. The Ion Reporter analysis workflow utilizes a custom variant calling and germline variant filtering algorithm to accurately estimate somatic variants in cancer research samples. A detailed report is provided that includes the normalized mutation load (mutations/MB) and mutation signatures of the somatic variants, including percentage of mutations consistent with UV damage, tobacco smoke damage, de-amination, and specific substitutions.

Learn more about Oncomine Oncology ›

Owl™ S3S System Combs Thermo Scientific™

Eliminate comb assembly with Thermo Scientific™ Owl™ S3S System Combs. These heavy-duty, one-piece combs are for use with the Owl™ S3S System.

Oracle License for GeneMapper™ Software 5 Client Installations Applied Biosystems™

This license is required for more than 5 client installations of GeneMapper® Software 5.

Applied Biosystems™ RapidLINK™ Software v1.0 License Applied Biosystems™

NOTE: For use with the Applied Biosystems-branded RapidHIT ID System only (Cat. No. A41810).

Applied Biosystems RapidLINK Software v1.0 is part of the Applied Biosystems RapidHIT ID System. This fast and simple system produces trusted lab-quality forensic DNA profiles in 90 minutes that are aggregated within software for direct upload to the database of choice or for further review and analysis. This data management software expedites identity confirmation securely and efficiently.

This product provides a single Applied Biosystems RapidLINK Software v1.0 serial number and a selection of quantities of user licenses.
Features of the Applied Biosystems RapidLINK Software v1.0 include:
• Securely manage one or more Applied Biosystems RapidHIT ID systems from a central location
• Review DNA profile results in real time prior to upload
• Enable or disable users in real time
• Collect and review metadata using built-in reporting tools
• Expert system-capable
• Sample/data accessioning workflow-capable

Ion GeneStudio™ S5 System with SmartStart Ion Torrent™

The Ion GeneStudio S5 System is a semiconductor-based next-generation sequencing (NGS) system that enables simple targeted sequencing workflows. The Ion GeneStudio S5 System is optimized to provide affordability for labs focused on smaller panels and lower sequencing throughput requirements. With cartridge-based reagents, the system is simple to use and offers scalability and flexibility. It uses Ion 5 Series chips to support a broad range of high-throughput sequencing for clinical research and research applications from microbial genomes and gene panels to exomes and transcriptomes.

Key features:
• Select the chip (Ion 510–540 chip) that fits your application and throughput needs to achieve from 2–80 million reads per run
• Reduce setup time and complexity with cartridge-based plug-and-play reagents
• Complete run and analysis in hours and move forward with your experiments

The Ion GeneStudio S5 Series
The Ion GeneStudio S5 Series sequencers share the same foundational technology and fluidic architecture across all three instruments: this Ion GeneStudio S5 System, the Ion GeneStudio S5 Plus System, and Ion GeneStudio S5 Prime System. The primary difference across the three instruments is on-sequencer analysis time.

Speed
The Ion GeneStudio S5 Series leverages the speed of semiconductor sequencing to enable the production of high quality sequencing data in a few hours and enables you to go from DNA library to data in as little as 24 hours with only 45 minutes of total hands-on time when paired with the Ion Chef System.

Simplicity
With single-day installation, a straightforward user interface, and cartridge-based reagents, the Ion GeneStudio S5 Series sequencers are easy to use. Combined with Ion AmpliSeq technology for target selection, the Ion Chef System for automated library and template preparation, and Ion Reporter Software for automated variant annotation, targeted sequencing is simpler than ever.

Small sample input
Low input DNA from challenging samples types such as formalin-fixed paraffin-embedded (FFPE) tissue, retrospective samples from fine needle aspirates, and cell-free DNA extracted from blood (cfDNA) can be difficult to sequence on competitor next-generation sequencers. However, with Ion AmpliSeq technology and the Ion GeneStudio S5 Series, you can use as little as 1 ng input DNA or RNA.

Scalability
Why buy multiple systems for your lab when you can run all of your targeted sequencing or microbial applications on a single next-generation sequencer? The Ion 5 Series chips that run on the Ion GeneStudio S5 Series provide several throughput options, so your lab has the flexibility to scale from small to large projects, enabling multiple targeted sequencing applications on a single system.

Simple analysis and storage solutions
Torrent Suite Software and Ion Reporter Software make NGS easy for beginners and experts alike. Plan, monitor, track, and analyze your runs using Torrent Suite Software (pre-installed on the Torrent Server). Integrate, annotate, and interpret variants using Ion Reporter Software (Thermo Fisher Cloud or local options available based on your needs).

Services and support
With more than 2,000 field personnel, Thermo Fisher Scientific has the most extensive network of dedicated Field Application Specialists and Service Engineers to work with you, so you can be confident that we will be there when and where you need us most.

Service and support plans—comprehensive plans to maximize instrument performance and ensure availability of critical systems
Qualification services—document and ensure instrument is installed, operating, and performing to manufacturer’s specifications
Training—courses for experimental design, data analysis, troubleshooting, applications, and instrument operation
Bioinformatics—tailored support for NGS informatics execution, software use, data analysis, and downstream applications
DataSafe Solution—storage and back-up strategy, design, hardware, and support for all lab data

Plate Septa, 96 well Applied Biosystems™

These are septa for use with the 3730, 3730xl, 3130xl, and 3130, instruments.

Use with:
310 Running Buffer (10X), 3100/3100-Avant™ Genetic Analyzer Autosampler Plate Kit, 96-well, 3130/3100-Avant™ Genetic Analyzer Capillary Array (36 cm), 3130xl/3100 Genetic Analyzer Capillary Array (36 cm), 3130xl/3100 Genetic Analyzer Capillary Array (50 cm), 3730 Running Buffer (10X), 5.0 mL Glass Syringe (polymer reserve syringe), 96-Well Plate Base, 96-Well Plate Retainer, Hi-Di™ Formamide, MicroAmp® Optical 96-Well Reaction Plate, MicroAmp® Optical 96-Well Reaction Plate with Barcode, POP-4® Polymer for 3100/3100-Avant™ Genetic Analyzers, POP-4® Polymer for 3130/3130xl Genetic Analyzers, POP-4® Polymer for 3130/3130xl Genetic Analyzers, POP-7™ Polymer for 3130/3130xl Genetic Analyzers, POP-7™ Polymer for 3130/3130xl Genetic Analyzers, Reservoir Septa

5500 Genetic Analyzer Applied Biosystems™

Built on three decades of sequencing expertise and powered by the proven accuracy of ligation-based sequencing, the new 5500 Genetic Analyzer provides a robust, affordable next-generation sequencing platform for every lab. Designed to give you the choice to optimize for turnaround time or throughput, the 5500 Genetic Analyzer is a highly accurate, cost-effective solution for analyzing one or many samples.

Key Benefits
• Sequencing right here, right now
• Cost-effective sequencing runs with individually configurable lanes
• Superior low frequency variant detection for whole exome sequencing or targeted resequencing
• Reproducibility, reliability, and quality for your RNA applications
• Confidence and uniformity in multiplexing with up to 96 barcodes
• Optimal analysis solutions for streamlined productivity and freedom to operate

Explore the Depths of Translational Research
With Exact Call Chemistry, the industry-leading accuracy of the 5500 Genetic Analyzer helps you get definitive answers about biological variation for applications like whole exome, RNA-seq, and structural variation.

Customize the System for Your Projects
The 5500 Genetic Analyzer allows you to tailor your sequencing runs precisely for your research. The six independent FlowChip lanes and Pay-Per-Lane Sequencing (PPL-Seq™) allow you to configure the instrument to different project scales and application types. Additionally, the system’s intelligent barcode kits can accommodate from one to hundreds of samples in a single run.

Don’t Wait
With the 5500 Genetic Analyzer, the unique capability to run each FlowChip lane independently allows you to turn around results in the shortest time possible. Now you can explore the genome, transcriptome, and epigenome with a hypothesis-neutral platform that combines powerful sequence data generation with premium accuracy. Whether you're running whole exome, RNA-seq, or a structural variation experiment, the 5500 Genetic Analyzer is designed to deliver high-quality results in a time-sensitive and cost-effective manner.

Perform Sequencing with Ease
Designed in collaboration with core facilities and principal investigators, the integrated 5500 Genetic Analyzer provides an intuitive and user-friendly workflow from sample preparation to data analysis.

Workflow Benefits Include:
• Embedded sequencing controls to enable real-time monitoring of data quality throughout the entire workflow
• System alerts to help maximize data quality and system performance, and to track reagent usage during the course of the sequencing run
• Easy-to-use software, 60% smaller data footprints, workstation computing, and standard base sequence file formats to facilitate setup, daily operations, and seamless integration with data analysis tools

Join the Era of Genomic Medicine
The throughput, broad range of applications, system flexibility, and intuitive design of the 5500 Genetic Analyzer address the needs of core and services laboratories, and basic and clinical research labs, to take sequencing into every scientific discipline.

A Community of Support
With more than 2,000 field personnel, we have the most extensive network of dedicated Field Application Specialists and Service Engineers in the industry. You can feel confident that we will be there when and where you need us most.

The 5500 Genetic Analyzer is For Research Use Only. Not intended for any animal or human therapeutic or diagnostic use.
Results per page
    spinner