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Application Notes & Tutorials: Chromatin Immunoprecipitation-based Sequencing (ChIP-Seq) on the SOLiD™ System Product Literature

Radiation resistance of sequencing chips for in situ life detection. Citations & References

  • Authors: Carr CE, Rowedder H, Lui CS, Zlatkovsky I, Papalias CW, Bolander J, Myers JW, Bustillo J, Rothberg JM, Zuber MT, Ruvkun G
  • Journal: Astrobiology 2013; (13):6 560-569
  • PubMed ID: 23734755

Brochures & Specifications: Brochure: Ion Torrent Personal Genome Machine & Sequencing Chip Product Literature

Brochures & Specifications: Brochure: Personal Genome Machine & Sequencing Chip Product Literature

The Use of Chromatin Precipitation Coupled to DNA Sequencing (ChIP-Seq) for the Analysis of Zta Binding to the Human and EBV Genome. Citations & References

  • Authors: Godfrey A, Ramasubramanyan S, Sinclair AJ
  • Journal: Methods Mol Biol 2017; (1532): 191-206
  • PubMed ID: 27873277

What is contained in the Ion ReproSeq PGS kits? Product FAQ

Answer

Six configurations of the Ion ReproSeq PGS Kit are available. The kits vary in the number of Ion SingleSeq kits provided, the maximum number of samples processed per kit, the type of Ion sequencing chip provided, and whether Ion sequencing chips are included. Depending upon the configuration, there are 4 or 5 subkits in the Ion ReproSeq PGS kits:

- Ion SingleSeq Kit includes reagents to extract, amplify, and barcode genomic DNA.

- Ion PGM Template IA 500 Kit includes reagents for preparing template-positive Ion PGM Template IA Ion Sphere Particles (ISPs) for sequencing with the Ion PGM System.

- Ion PGM Hi-Q Sequencing Kit includes reagents and materials for the initialization and sequencing runs on the Ion PGM Sequencer.

- Ion PGM Hi-Q Wash 2 Bottle Kit

- Ion Chip Kit v2: The Ion ReproSeq PGS kits are available with three different types of Ion Chips Kits v2: Ion 314 Chip Kit v2, Ion 316 Chip Kit v2, and Ion 318 Chip Kit v2. The Ion Chips Kits v2 in the Ion ReproSeq PGS kits are barcoded (BC). The non-barcoded (non-BC) versions of the Ion Chip Kits v2 are also available and can only be purchased as standalone items.

Answer Id:: E11469

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ChIP-Seq using high-throughput DNA sequencing for genome-wide identification of transcription factor binding sites. Citations & References

  • Authors: Lefrançois P, Zheng W, Snyder M
  • Journal: Methods Enzymol 2010; (470): 77-104
  • PubMed ID: 20946807
Catalog # 10416014

Progress in ion torrent semiconductor chip based sequencing. Citations & References

  • Authors: Merriman B, Rothberg JM
  • Journal: Electrophoresis 2012; (33):23 3397-3417
  • PubMed ID: 23208921

User Guide: Oncomine Precision Assay GX - For use with the Genexus Integrated Sequencer Manual / Product Insert

  • Version: B.0
Catalog #

RNA polymerase II pausing downstream of core histone genes is different from genes producing polyadenylated transcripts. Citations & References

  • Authors: Anamika K, Gyenis À, Poidevin L, Poch O, Tora L
  • Journal: PLoS One 2012; (7):6 e38769-e38769
  • PubMed ID: 22701709

Dose-dependent effects of small-molecule antagonists on the genomic landscape of androgen receptor binding. Citations & References

  • Authors: Zhu Z, Shi M, Hu W, Estrella H, Engebretsen J, Nichols T, Briere D, Hosea N, Los G, Rejto PA, Fanjul A
  • Journal: BMC Genomics 2012; (13): 355-355
  • PubMed ID: 22849360

Integrated analyses to reconstruct microRNA-mediated regulatory networks in mouse liver using high-throughput profiling. Citations & References

  • Authors: Hsu SD, Huang HY, Chou CH, Sun YM, Hsu MT, Tsou AP
  • Journal: BMC Genomics 2015; (16 Suppl 2): S12-S12
  • PubMed ID: 25707768

Human TREX component Thoc5 affects alternative polyadenylation site choice by recruiting mammalian cleavage factor I. Citations & References

  • Authors: Katahira J, Okuzaki D, Inoue H, Yoneda Y, Maehara K, Ohkawa Y,
  • Journal: Nucleic Acids Res (2013) 41:7060-7072
  • PubMed ID: 23685434
Catalog # 339300

Deep sequencing of MYC DNA-binding sites in Burkitt lymphoma. Citations & References

  • Authors: Seitz V, Butzhammer P, Hirsch B, Hecht J, Gütgemann I, Ehlers A, Lenze D, Oker E, Sommerfeld A, von der Wall E, König C, Zinser C, Spang R, Hummel M
  • Journal: PLoS One 2011; (6):11 e26837-e26837
  • PubMed ID: 22102868
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