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Vector NTI Advance™ Sequence Analysis Software Network License (Invitrogen™)

The price shown is the list price. To inquire on volume discount or account-specific pricing, please email bioinfosales@invitrogen.com or visit the Vector NTI® Software page.

Network Licenses are based on the concept of sharing a license among networked computers. All the networked computers (known as “Access Seats") are connected to a designated machine running Invitrogen’s Dynamic License Server (DLS) software. Network Licenses are useful for large groups of users who wish to maximize the number of individual computers that can run a copy of the Vector application.

Vector NTI Advance™ Sequence Analysis Software Dynamic License (Invitrogen™)

The price shown is the list price. To inquire on volume discount or account-specific pricing, please email bioinfosales@invitrogen.com or visit the Vector NTI® Software page.

Dynamic License Server (DLS) is a software installed on-site. It manages the distribution of the purchased number of Dynamic Licenses across purchased Access Seats on the network. Because there are generally more Seats than licenses in the system, not all computers can use the Vector NTI software at the same time. Thus, the number of licenses purchased represents the number of users who can access the Vector application concurrently. For example, an organization may equip 20 computers with 5 Network Licenses, meaning that at most 5 users (at any of the 20 computers) can use the Vector NTI application simultaneously.

Sequencing Analysis Software v6.0, Initial License (Applied Biosystems™)

This software enables you to basecall, trim, display, edit, and print data from our entire line of capillary DNA sequencing instruments for data analysis and quality control.

• Obtain longer read lengths, more high-quality bases, and increased accuracy at the 5' end
• Get increased accuracy in regions with low signal-to-noise ratios or with anomalous signal artifacts such as spikes or dye blobs
• Determine the quality of your data using superior metrics from basecalling quality values
• Accelerate quality control using analysis reports with analysis statistics
• Filter out low-quality sequence ends automatically with sequence trimming

Longer Read Lengths with High-Quality Base Pairs
Our significantly improved basecalling algorithm, the KB™ basecaller, now gives you up to 100 more high-quality bases than other basecalling algorithms. You also get longer read lengths with high-quality base pairs, mixed basecalling with quality value, and accurate basecalling of usually difficult-to-sequence short PCR fragments.

Easily Review Sequencing Results with Quality Values
This software enables you to customize and color code the range of the quality values to represent low-, medium-, and high-quality bases. This way, when the basecaller identifies each base and assigns it a quality value, all you have to do is look at the color coding to easily review, discard, or accept it. In addition, the software trims the ends of low-quality bases, grays them out on the user interface for easy identification, and calculates a sample score, which is the average quality value for all the bases in the untrimmed region.

Reduce Data Screening Time
Eliminate manual review of sequencing data batches. With the software's Quality Control (QC) reports, you get read length and sample score (average QV of bases in the clear range) for each sample file, enabling you to sort data by quality. And to make reviewing data even easier, each QC report is hyperlinked back to its source data.

Sequencing Analysis Software v5.4 Initial License (Applied Biosystems™)

This software enables you to basecall, trim, display, edit, and print data from our entire line of capillary DNA sequencing instruments for data analysis and quality control.

• Obtain longer read lengths, more high-quality bases, and increased accuracy at the 5' end
• Get increased accuracy in regions with low signal-to-noise ratios or with anomalous signal artifacts such as spikes or dye blobs
• Determine the quality of your data using superior metrics from basecalling quality values
• Accelerate quality control using analysis reports with analysis statistics
• Filter out low-quality sequence ends automatically with sequence trimming

Longer Read Lengths with High-Quality Base Pairs
Our significantly improved basecalling algorithm, the KB™ basecaller now gives you up to 100 more high-quality bases than other basecalling algorithms. You also get longer read lengths with high-quality base pairs, mixed basecalling with quality value, and accurate basecalling of usually difficult-to-sequence short PCR fragments.

Easily Review Sequencing Results with Quality Values
This software enables you to customize and color code the range of the quality values to represent low-, medium-, and high-quality bases. This way, when the basecaller identifies each base and assigns it a quality value, all you have to do is look at the color coding to easily review, discard, or accept it. In addition, the software trims the ends of low-quality bases, grays them out on the user interface for easy identification, and calculates a sample score, which is the average quality value for all the bases in the untrimmed region.

Reduce Data Screening Time
Eliminate manual review of sequencing data batches. With the software's Quality Control (QC) reports, you get read length and sample score (average QV of bases in the clear range) for each sample file, enabling you to sort data by quality. And to make reviewing data even easier, each QC report is hyperlinked back to its source data

For Research Use Only. Not for use in diagnostics procedures.

GeneMapper™ Software v4.1, client installation (Applied Biosystems™)

This client version of GeneMapper® Software v4.1 installs the client configuration (user interface) only. Users must install GeneMapper® Software 4.1, full installation, prior to installing the client version, which should be installed on a computer separate from that of the full version.

GeneMapper® Software is a flexible fragment analysis software package that provides quality DNA sizing and allele calls for all Applied Biosystems® genetic analyzers. This software is designed to support multi-application functionality, including analysis of amplified fragment length polymorphism (AFLP), loss of heterozygosity (LOH), microsatellites, and SNP genotyping.

Features include:
• Multi-user, client-server deployment (through Oracle 11g RDBMS)
• Increased data processing efficiency through remote auto-analysis and command line operation
• Security and audit features to help you meet 21CFR11 requirements
• Organize, manage, and batch-process your data with Report Manager and Database Dashboard
• Automatically evaluate and reduce data review time with Process Quality Values (PQVs) for high-throughput genotyping

The software supports a wide variety of applications on the Applied Biosystems® 3500, 3500xL, 3730, 3730xl, 3130, 3130xl, 3100, 3100–Avant, and 310 instrument systems.

Partek™ Flow™ Software, 12 month license (Government) (Ion Torrent™)

Partek® Flow® Software is specifically designed for front-end alignment, enhanced quality control, RNA quantification, and variant detection analysis of next-generation sequencing data as part of your research. Use it alone, or combined with Partek® Genomics Suite™ Software, for complete start-to-finish next generation sequencing data analysis (see figure below for a comparison of features). This product, which can be ordered through our website, is supplied directly by Partek Incorporated.

• Get started right away with a user-friendly interface that guides selection and alignment and organizes work into projects for intuitive navigation
• Easily add users to collaborate and share protocols and data within your institution to save time and leverage collective knowledge
• Schedule tasks to run when resources become available and receive e-mail notifications when tasks are complete so you can focus your efforts where they are needed most
• Desktop, server, cluster, and cloud-friendly installation allow for multi-user site license option, the ability to effortlessly process enormous data sets, and the ability to access your data from any browser, anywhere
• Process raw data from all leading next-generation sequencing technologies
• Automatically record your project history for easy auditing and tracking
• Save storage space and reduce your file output size and transfer time by automatically converting to BAM files and compressed project files that seamlessly transition data to Partek® Genomics Suite™ Software
• Supports all core assays allowing you to analyze data using a variety of approaches

This Partek® Flow® Software product is manufactured and offered by Partek Incorporated. Purchases of this product will be processed by us on behalf of Partek, as will all subsequent fulfillment, shipment, and support needs.

GeneMapper™ Software 5, client upgrade (Applied Biosystems™)

This product upgrades a previous Client Installation of GeneMapper® Software to GeneMapper® Software 5.

GeneMapper® Software is a flexible genotyping software package that provides DNA sizing and quality allele calls for all of our electrophoresis-based genotyping systems. This software specializes in multi-application functionality, including amplified fragment length polymorphism (AFLP®), loss of heterozygosity (LOH), microsatellite and SNP genotyping analysis. GeneMapper® Software can help users increase data processing efficiency with remote auto-analysis and command line operation, and allows for multiuser, client-server deployment. The software uses Process Quality Values (PQVs) for automated identification that reduces data review time for high throughput genotyping. In addition, the security and audit features help users meet 21 CFR 11 requirements.

Features include:

• Installation on the data collection computer or a non-instrument computer
• Support of networked multiple clients when installed on a non-instrument computer
• An Oracle® 11g database with project-related data storage that ensures faster installation times and latest database support, as well as flexible archive capabilities
• Customizable project auto-saving frequency
• Defining of linearity range in the analysis methods for more reproducible, higher quality sizing of larger fragments (>800bps)
• Analysis of 6-dye data generated from the Applied Biosystems® 3500 and 3500xL instrument systems for higher multiplexing capabilities

GeneMapper® Software has not undergone specific developmental validation for human identification applications. Human identification laboratories analyzing single-source or parentage samples that choose to use GeneMapper® Software for data analysis should perform their own developmental validation studies.

Several users may access the database concurrently; however, because genotype analysis is data-intensive, more than five clients simultaneously accessing the database may slow the performance of GeneMapper® Software.

Recommended Computer Configuration: Dell® Optiplex XE, with Core 2 Duo E8400/3.0GHz, 6MB, 1333FSB, 4GB, Non-ECC, 1333MHz DDR3, 2X2GB, Dell OptiPlex 580, 2 x 500GB SATA 3.0Gb/s and 8MB Data Burst Cache, 16X DVD+/-RW SATA, Data Only, 17-inch Color Monitor (1280 x 1024 pixels or higher). Supported Operating Systems: Windows® 7 Professional Service Pack 1 32-bit.

Partek™ Genomics Suite™ Software Academic License, 12 Months (Ion Torrent™)

Partek® Genomics Suite™ Software is a full-featured software package for the analysis, comparison, and integration of genomic data. This product, which can be ordered through our website, is supplied directly by Partek Incorporated.

Partek® Genomics Suite™ Software gives you:

• Sophisticated capabilities for DNA-seq, ChIP-seq, and RNA-seq experiments
• Statistical analysis of each base pair for DNA-seq
• Extensive annotations
• SFF, FASTQ, and SAM/BAM file formats

Partek® Genomics Suite™ Software—Your Start-To-Finish Solution For Integrated Genomics
Partek® Genomics Suite™ Software offers a variety of next generation sequencing workflows including DNA-seq, ChIP-seq and RNA-seq. Within the DNA-seq workflow, Genomics Suite™ Software extends the analysis, identifying DNA variations beyond simple filters based on depth of coverage or allele frequencies. Genomics Suite™ Software performs a statistical test at each base pair to determine if the variation seen at that base is statistically different from the control, while users have the ability to change the definition of "control." Comparisons can be made in a paired manner; for example, a single sample can be compared against a control, variants can be identified against a consensus, or variants can be found across a collection of samples without a defined reference. Genomics Suite™ Software offers integration using the industry standard file formats SFF, FASTQ, and SAM/BAM. Once variants have been identified, a collection of rich annotations allows the user to explore the biology that lies underneath the variation.

Now Integrated with TaqMan® Assays
Partek® Genomics Suite™ Software is now integrated with TaqMan® real time PCR assays. The software allows you to easily select the real time PCR assays to validate your next generation sequencing data.

This Partek® Genomics Suite™ product is manufactured and offered by Partek Incorporated. Purchases of this product will be processed by us on behalf of Partek, as will all subsequent fulfillment, shipment, and support needs.

Partek™ Flow™ Software, 12 month license (Commercial) (Ion Torrent™)

Partek® Flow® Software is specifically designed for front-end alignment, enhanced quality control, RNA quantification, and variant detection analysis of next-generation sequencing data as part of your research. Use it alone, or combined with Partek® Genomics Suite™ Software, for complete start-to-finish next generation sequencing data analysis (see figure below for a comparison of features). This product, which can be ordered through our website, is supplied directly by Partek Incorporated.

• Get started right away with a user-friendly interface that guides selection and alignment and organizes work into projects for intuitive navigation
• Easily add users to collaborate and share protocols and data within your institution to save time and leverage collective knowledge
• Schedule tasks to run when resources become available and receive e-mail notifications when tasks are complete so you can focus your efforts where they are needed most
• Desktop, server, cluster, and cloud-friendly installation allow for multi-user site license option, the ability to effortlessly process enormous data sets, and the ability to access your data from any browser, anywhere
• Process raw data from all leading next-generation sequencing technologies
• Automatically record your project history for easy auditing and tracking
• Save storage space and reduce your file output size and transfer time by automatically converting to BAM files and compressed project files that seamlessly transition data to Partek® Genomics Suite™ Software
• Supports all core assays allowing you to analyze data using a variety of approaches

This Partek® Flow® Software product is manufactured and offered by Partek Incorporated. Purchases of this product will be processed by us on behalf of Partek, as will all subsequent fulfillment, shipment, and support needs.

GeneMapper™ Software 5, full upgrade (Applied Biosystems™)

This product upgrades a previous Full Installation version of GeneMapper® Software to GeneMapper® Software 5.

GeneMapper® Software is a flexible genotyping software package that provides DNA sizing and quality allele calls for all of our electrophoresis-based genotyping systems. This software specializes in multi-application functionality, including amplified fragment length polymorphism (AFLP®), loss of heterozygosity (LOH), microsatellite and SNP genotyping analysis. GeneMapper® Software can help users increase data processing efficiency with remote auto-analysis and command line operation, and allows for multiuser, client-server deployment. The software uses Process Quality Values (PQVs) for automated identification that reduces data review time for high throughput genotyping. In addition, the security and audit features help users meet 21 CFR 11 requirements.

Features include:

• Installation on the data collection computer or a non-instrument computer
• Support of networked multiple clients when installed on a non-instrument computer
• An Oracle® 11g database with project-related data storage that ensures faster installation times and latest database support, as well as flexible archive capabilities
• Customizable project auto-saving frequency
• Defining of linearity range in the analysis methods for more reproducible, higher quality sizing of larger fragments (>800bps)
• Analysis of 6-dye data generated from the Applied Biosystems® 3500 and 3500xL instrument systems for higher multiplexing capabilities

GeneMapper® Software has not undergone specific developmental validation for human identification applications. Human identification laboratories analyzing single-source or parentage samples that choose to use GeneMapper® Software for data analysis should perform their own developmental validation studies.

Several users may access the database concurrently; however, because genotype analysis is data-intensive, more than five clients simultaneously accessing the database may slow the performance of GeneMapper® Software.

Recommended Computer Configuration: Dell® Optiplex XE, with Core 2 Duo E8400/3.0GHz, 6MB, 1333FSB, 4GB, Non-ECC, 1333MHz DDR3, 2X2GB, Dell OptiPlex 580, 2 x 500GB SATA 3.0Gb/s and 8MB Data Burst Cache, 16X DVD+/-RW SATA, Data Only, 17-inch Color Monitor (1280 x 1024 pixels or higher). Supported Operating Systems: Windows® 7 Professional Service Pack 1 32-bit.

Partek™ Flow™ Software, 12 month license (Academic) (Ion Torrent™)

Partek® Flow® Software is specifically designed for front-end alignment, enhanced quality control, RNA quantification, and variant detection analysis of next-generation sequencing data as part of your research. Use it alone, or combined with Partek® Genomics Suite™ Software, for complete start-to-finish next generation sequencing data analysis (see figure below for a comparison of features). This product, which can be ordered through our website, is supplied directly by Partek Incorporated.

• Get started right away with a user-friendly interface that guides selection and alignment and organizes work into projects for intuitive navigation
• Easily add users to collaborate and share protocols and data within your institution to save time and leverage collective knowledge
• Schedule tasks to run when resources become available and receive e-mail notifications when tasks are complete so you can focus your efforts where they are needed most
• Desktop, server, cluster, and cloud-friendly installation allow for multi-user site license option, the ability to effortlessly process enormous data sets, and the ability to access your data from any browser, anywhere
• Process raw data from all leading next-generation sequencing technologies
• Automatically record your project history for easy auditing and tracking
• Save storage space and reduce your file output size and transfer time by automatically converting to BAM files and compressed project files that seamlessly transition data to Partek® Genomics Suite™ Software
• Supports all core assays allowing you to analyze data using a variety of approaches

This Partek® Flow® Software product is manufactured and offered by Partek Incorporated. Purchases of this product will be processed by us on behalf of Partek, as will all subsequent fulfillment, shipment, and support needs.

GeneMapper™ Software v4.1, full installation (Applied Biosystems™)

GeneMapper® Software is a flexible fragment analysis software package that provides quality DNA sizing and allele calls for all Applied Biosystems® genetic analyzers. This software is designed to support multi-application functionality, including analysis of amplified fragment length polymorphism (AFLP), loss of heterozygosity (LOH), microsatellites, and SNP genotyping.

Features include:
• Multi-user, client-server deployment (through Oracle 11g RDBMS)
• Increased data processing efficiency through remote auto-analysis and command line operation
• Security and audit features to help you meet 21CFR11 requirements
• Organize, manage, and batch-process your data with Report Manager and Database Dashboard
• Automatically evaluate and reduce data review time with Process Quality Values (PQVs) for high-throughput genotyping

The software supports a wide variety of applications on the Applied Biosystems® 3500, 3500xL, 3730, 3730xl, 3130, 3130xl, 3100, 3100–Avant, and 310 instrument systems.

Partek™ Flow™ + Genomics Suite™ Software Bundle, 12 month license (Commercial) (Ion Torrent™)

The Partek® software suite is a complete start-to-finish genomic data analysis solution, providing powerful statistics and visualizations. Start with raw NGS reads from the Ion PGM™ or Ion Proton™ sequencers and quickly identify biologically meaningful results and pathways. The user-friendly point and click interface provides streamlined analysis to guide the novice user without sacrificing advanced functionality.

This bundle combines both the front-end Partek® Flow® pipeline manager and the downstream Partek® Genomics Suite™ analysis tools to provide a complete end-to-end solution for RNA-Seq applications. (See figure below for a comparison of features.)

This Partek® Flow® + Genomics Suite™ bundle is manufactured and offered by Partek Incorporated. Purchases of this product will be processed by us on behalf of Partek, as will all subsequent fulfillment, shipment, and support needs.

Partek™ Genomics Suite™ Software Government License, 12 Months

Partek® Genomics Suite™ Software is a full-featured software package for the analysis, comparison, and integration of genomic data. This product, which can be ordered through our website, is supplied directly by Partek Incorporated.

Partek® Genomics Suite™ Software gives you:

• Sophisticated capabilities for DNA-seq, ChIP-seq, and RNA-seq experiments
• Statistical analysis of each base pair for DNA-seq
• Extensive annotations
• SFF, FASTQ, and SAM/BAM file formats

Partek® Genomics Suite™ Software—Your Start-To-Finish Solution For Integrated Genomics
Partek® Genomics Suite™ Software offers a variety of next generation sequencing workflows including DNA-seq, ChIP-seq and RNA-seq. Within the DNA-seq workflow, Genomics Suite™ Software extends the analysis, identifying DNA variations beyond simple filters based on depth of coverage or allele frequencies. Genomics Suite™ Software performs a statistical test at each base pair to determine if the variation seen at that base is statistically different from the control, while users have the ability to change the definition of "control." Comparisons can be made in a paired manner; for example, a single sample can be compared against a control, variants can be identified against a consensus, or variants can be found across a collection of samples without a defined reference. Genomics Suite™ Software offers integration using the industry standard file formats SFF, FASTQ, and SAM/BAM. Once variants have been identified, a collection of rich annotations allows the user to explore the biology that lies underneath the variation.

Now Integrated with TaqMan® Assays
Partek® Genomics Suite™ Software is now integrated with TaqMan® real time PCR assays. The software allows you to easily select the real time PCR assays to validate your next generation sequencing data.

This Partek® Genomics Suite™ product is manufactured and offered by Partek Incorporated. Purchases of this product will be processed by us on behalf of Partek, as will all subsequent fulfillment, shipment, and support needs.

Partek™ Flow™ + Genomics Suite™ Software Bundle, 12 month license (Government) (Ion Torrent™)

The Partek® software suite is a complete start-to-finish genomic data analysis solution, providing powerful statistics and visualizations. Start with raw NGS reads from the Ion PGM™ or Ion Proton™ sequencers and quickly identify biologically meaningful results and pathways. The user-friendly point and click interface provides streamlined analysis to guide the novice user without sacrificing advanced functionality.

This bundle combines both the front-end Partek® Flow® pipeline manager and the downstream Partek® Genomics Suite™ analysis tools to provide a complete end-to-end solution for RNA-Seq applications. (See figure below for a comparison of features.)

This Partek® Flow® + Genomics Suite™ bundle is manufactured and offered by Partek Incorporated. Purchases of this product will be processed by us on behalf of Partek, as will all subsequent fulfillment, shipment, and support needs.