Multi-Scale Cylinder Correlation
Add-on How-to

Multi-Scale Cylinder Correlation

Python (pyscro), Project (hx, pgo)

30 Jul 2020 - This module gives better results for fiber-tracing in the case of multiple fibers with differing or varying diameters in the same dataset.  Learn more

Create a Porosity Analysis Recipe
How-to

Create a Porosity Analysis Recipe

Recipe (hxrecipe), Demo

15 Jul 2020 - This tutorial explains how to create a simple porosity analysis and turn it into a push-button recipe.  Learn more

Segment TEM data without artifact  and background effect
Add-on

Segment TEM data without artifact and background effect

Recipe (hxrecipe), Tcl, Project (hx, pgo)

10 Jul 2020 - Segment TEM data aided by the Structure enhancement filter.  Learn more

Segmentation of Pathological Osteocytes in an Undecalcified Piece of Mouse Bone using Amira-Avizo2D
Add-on

Segmentation of Pathological Osteocytes in an Undecalcified Piece of Mouse Bone using Amira-Avizo2D

Recipe ISP, IVP, A2D

3 Jul 2020 - This is a workflow to segment out osteocytes in mouse bone sample using Amira-Avizo2D.  Learn more

Interactive Top-Hat by Reconstruction
Add-on How-to

Interactive Top-Hat by Reconstruction

XPand module

3 Jul 2020 - This module provides an interactive Top-Hat segmentation that prevents the segmentation of "false positive" porosity on the edges.  Learn more

Molar Segmentation Using Watershed, Top-Hat, and Surface Generation
Add-on How-to

Molar Segmentation Using Watershed, Top-Hat, and Surface Generation

Project (hx, pgo), Demo, Data

11 May 2020 - Data, tutorial, and complete project for segmenting a CT-scanned human molar artifact. The tutorial and project cover advanced image segmentation and surface generation.  Learn more

Extract Label
Add-on

Extract Label

Python (pyscro)

11 May 2020 - This module extracts a specified label region by its ID.  Learn more

Copy Measure Annotation Settings
Add-on

Copy Measure Annotation Settings

Tcl

15 Apr 2020 - This Tcl script-object can be used to copy visualisation settings from one measure to all others in a Measurement module. It is also possible to save/load settings to/from a text file.  Learn more

Caption From Port
Add-on

Caption From Port

Tcl

15 Apr 2020 - Use this module to fill the text field of a Caption module with the value of a port of another module.  Learn more

Scale-Space Laplacian of Gaussian Filter
Add-on

Scale-Space Laplacian of Gaussian Filter

Python (pyscro)

15 Apr 2020 - Image processing filter enhancing spherical or blob like objects of various sizes.  Learn more

Amira User's Guide translated to Japanese
Add-on How-to

Amira User's Guide translated to Japanese

Demo, Misc

29 Jan 2020 - You will find here a large selection of Amira tutorials translated to Japanese.  Learn more

Create Label Annotations
Add-on

Create Label Annotations

Tcl

13 Dec 2019 - This module creates label annotations from the result of a Label Analysis with the help of the Measurement tool.  Learn more

Average Interleaved Data
Add-on

Average Interleaved Data

Python (pyscro), Project (hx, pgo)

21 Oct 2019 - The purpose of this python script object is to average interleaved data.  Learn more

Load a Numpy array into PerGeos-Amira-Avizo using the Python API
Add-on

Load a Numpy array into PerGeos-Amira-Avizo using the Python API

Python (pyscro)

21 Oct 2019 - This script simply reads and loads numpy arrays in a user specified directory into PerGeos/Amira-Avizo as an image.  Learn more

Length Distribution Analysis
Add-on How-to

Length Distribution Analysis

Recipe (hxrecipe), Project (hx, pgo), Demo, Data

21 Oct 2019 - This tutorial demonstrated how to quantify thickness distribution along the length  Learn more

Porosity Clustering Analysis and Distance to Surface
Add-on How-to

Porosity Clustering Analysis and Distance to Surface

Recipe (hxrecipe), Project (hx, pgo), Demo, Data

21 Oct 2019 - This tutorial demonstrates the steps necessary to quantify porosity distribution and perform a pore distance to surface analysis.  Learn more

Feature segmentation for non-uniform illumination and low-contrast images
Add-on

Feature segmentation for non-uniform illumination and low-contrast images

Recipe (hxrecipe)

17 Oct 2019 - The recipe lets you segment small features on images with non-uniform illumination and low contrast.  Learn more

Auto-Crop Script Module
Add-on

Auto-Crop Script Module

Tcl

16 Oct 2019 - Automatically crop your volume data to reduce its size.  Learn more

Export Spatial Graph to MS Excel CSV Document
Add-on How-to

Export Spatial Graph to MS Excel CSV Document

Recipe (hxrecipe), Tcl, Demo

16 Oct 2019 - An Amira-Avizo recipe to export to a CSV document which can be used in MS Excel for further analysis.  Learn more

Refine Surface
Add-on

Refine Surface

XPand module

16 Oct 2019 - This module refines a surface.  Learn more

View Manager
Add-on

View Manager

Tcl

14 Oct 2019 - This module allows storing and retrieving camera settings for viewer windows to be able to switch easily between different view presets.  Learn more