Auto Crop Banner New
Add-on

Auto Crop Banner

Python (pyscro)

3 Sep 2026 - This module automatically crops the info banner away of the input 2D grayscale image.  Learn more

Getting Started with Amira-Avizo Software New
How-to

Getting Started with Amira-Avizo Software

Demo

8 Jul 2026 - Two videos introducing the layout and basic interactivity within Thermo Scientific Amira-Avizo Software.  Learn more

How to Visualize 3D Image Data New
How-to

How to Visualize 3D Image Data

Demo

8 Jul 2026 - Amira and Avizo provide several ways to view 3D image data. This video explains how to view 3D image data as a series of 2D Ortho Slices, as an Isosurface, and as a direct 3D Volume Rendering.  Learn more

How to Load 3D Image Data into Amira-Avizo Software New
How-to

How to Load 3D Image Data into Amira-Avizo Software

Demo

8 Jul 2026 - Nearly all Amira-Avizo projects begin by loading image data. This brief tutorial explains how to load 2D and 3D image data from disk.  Learn more

How to Save an Amira-Avizo Project New
How-to

How to Save an Amira-Avizo Project

Demo

8 Jul 2026 - It is important to save and share work done in Amira-Avizo Software. Project files are used to restore a prior session. This video explains how to save your entire project, including considerations for disk space, recomputation, and portability.  Learn more

How to Automate Routines with Recipes New
How-to

How to Automate Routines with Recipes

Demo

8 Jul 2026 - Routine image processing and analysis steps can be automated using the flexible Recipes concept in Amira-Avizo Software. These videos explain how to create, modify, and reuse Recipes. Advanced topics are covered.  Learn more

Introduction to the Segmentation+ Workroom Interface New
How-to

Introduction to the Segmentation+ Workroom Interface

Demo

8 Jul 2026 - Many segmentation projects benefit from a specialist's manual selections. This short tutorial explains the interface used for manual segmentation in Amira and Avizo Software.  Learn more

How to Use Interactive Segmentation Tools in Segmentation+ Workroom New
How-to

How to Use Interactive Segmentation Tools in Segmentation+ Workroom

Demo

8 Jul 2026 - These two tutorials list the most commonly used segmentation tools in Amira and Avizo Software. The combination of tools provides excellent flexibility for full segmentation projects or for establishing ground truth used in Deep Learning model training.  Learn more

How to Make Animations with the Animation Director New
How-to

How to Make Animations with the Animation Director

Demo

8 Jul 2026 - Animations are a highly compelling tool for disseminating the research you do with Amira-Avizo Software and your associated imaging tools. These videos explain how to use the Animation Director for flexible and high-quality animation production.  Learn more

How to Animate Appearance and Disappearance New
How-to

How to Animate Appearance and Disappearance

Demo

8 Jul 2026 - This video explains a basic way to animate the appearance and disappearance of displays in Amira-Avizo Software.  Learn more

How to Use Volume Edit for Custom ROI Selection and Cropping New
How-to

How to Use Volume Edit for Custom ROI Selection and Cropping

Demo

8 Jul 2026 - This tutorial explores the Volume Edit module: a versatile way of modifying a dataset to remove sample holders or irrelevant objects before visualization and segmentation.  Learn more

How to Manage Multi-Channel Data New
How-to

How to Manage Multi-Channel Data

Demo

8 Jul 2026 - Often, optical and spectroscopy data are stored as independent channels - each containing unique information as image fields. This tutorial explains how to relate 2 or more datasets in Amira-Avizo Software using the Multi-channel Field object.  Learn more

Amira-Avizo eLearning datasets: Image Segmentation
How-to

Amira-Avizo eLearning datasets: Image Segmentation

Data

24 May 2026 - This repository contains all the practice datasets within the Image Segmentation eLearning lessons.  Learn more

Simplified Import of AutoSlice & View and Adaptive Scanning Data
Add-on

Simplified Import of AutoSlice & View and Adaptive Scanning Data

Python (pyscro), Demo, Data

31 Mar 2026 - Custom TIF reader to parse AutoSlice&View and Adaptive Scanning datasets, preserve voxel size metadata, and prepare data for visualization and post-processing.  Learn more

ML/DL Object Classification and Accuracy Assessment
Add-on

ML/DL Object Classification and Accuracy Assessment

Python (pyscro), Demo

26 Feb 2026 - Train and Infer the class of segmented objects using Machine or Deep Learning methods.  Learn more

CellPose Segmentation
Add-on

CellPose Segmentation

Deep learning model, Python (pyscro), Project (hx, pgo)

23 Oct 2025 - Use pre-trained CellPose models for prediction of instance-level segmentation and labeling in both 2D and 3D data, applicable to a variety of generalized objects.  Learn more

Tutorial PreTrained AI models for Model Manager
Add-on

Tutorial PreTrained AI models for Model Manager

Deep learning model

22 Oct 2025 - Pretrained models of the Deep Learning Tutorial, to populate the newly introduced Model Manager and Model Comparison panel (Compatible only with Amira-Avizo 2025.1)  Learn more

Tutorial Data
How-to

Tutorial Data

Data

21 Oct 2025 - Datasets required to follow several advanced tutorials.  Learn more

Deploy ROI Extractor and Patch Extractor Modules
Add-on

Deploy ROI Extractor and Patch Extractor Modules

Tcl

16 Jan 2025 - This Xtra allows for ROI Extractor and Patch Extractor modules deployment.  Learn more

Segmentation+ Workroom Tutorial
How-to

Segmentation+ Workroom Tutorial

Demo

2 May 2024 - Discover the Segmentation+ workroom, a powerful tool for interactive 3D image segmentation. This tutorial offers a comprehensive overview of the segmentation process, covering essential principles and tools.  Learn more

How to Use the Arithmetic Module
How-to

How to Use the Arithmetic Module

Demo

2 Jan 2024 - This series of video tutorials introduces the Arithmetic module and examples of use cases.  Learn more