Trabecular Segmentation Workflow for Murine Tibial Bone
Recipe (hxrecipe), Project (hx, pgo), Demo, Data
11 Dec 2023 - Here we provide a workflow to easily obtain the segmentation of trabecular bones. Learn more
Visualize Identified Molecules of a Cryo-Tomogram
Python (pyscro), Project (hx, pgo)
4 Dec 2023 - This Xtra provides the means to import results from template matching and visualize them with the Molecule Cloud View module. In addition, a module is provided to crop point clouds according to an ROI-box. Learn more
Divide Full Data Volume into Defined Sub-Volume Blocks for Label Analysis
Recipe (hxrecipe), Project (hx, pgo), Demo
1 Sep 2022 - This Xtra demonstrates how to use the Arithmetic module to divide a whole volume data into defined sub-volume blocks and then perform label analysis on the blocks. Learn more
Python (pyscro), Project (hx, pgo)
24 Feb 2022 - The Slab View display module allows you to display only a slab from any kind of 3D visualization. Learn more
Porosity Volume Fraction Analysis
Project (hx, pgo), Demo, Data
18 Nov 2021 - This tutorial demonstrates the steps to quantify porosity volume fraction and distribution. Learn more
Inter Time Steps Recipe Player
Recipe (hxrecipe), Python (pyscro), Project (hx, pgo), Demo, Data
18 Nov 2021 - The Inter Time Steps Recipe Player module executes a two-input recipe to a specific pair of two successive time steps of a time series dataset, or to all its pairs of two successive time steps. Learn more
Using Tcl Command Module for Multi-File OBJ Export
Tcl, Project (hx, pgo)
7 Sep 2021 - The Tcl Command Module makes it easy to export the surfaces of single objects from a multi-object surface as OBJ (Wavefront) files. Learn more
Python (pyscro), Project (hx, pgo)
29 Mar 2021 - The Extract Oriented Labels module extracts every label from the input label image, and resamples each image along its own main orientations (or eigenvectors). Learn more
Getting Started with Flatten Module
Project (hx, pgo), Demo
8 Mar 2021 - This tutorial demonstrates use of the Flatten experimental module to create interactive contours by defining the unfolding surface while respecting the constraints of the module inputs. Learn more
Automatic Extraction of Transparent Surface Cross Section
Python (pyscro), Project (hx, pgo)
20 Oct 2020 - A module for creating partially transparent capping surfaces. Learn more
Multi-Scale Cylinder Correlation
Python (pyscro), Project (hx, pgo)
30 Jul 2020 - This module gives better results for fiber-tracing in the case of multiple fibers with differing or varying diameters in the same dataset. Learn more
Molar Segmentation Using Watershed, Top-Hat, and Surface Generation
Project (hx, pgo), Demo, Data
11 May 2020 - Data, tutorial, and complete project for segmenting a CT-scanned human molar artifact. The tutorial and project cover advanced image segmentation and surface generation. Learn more
Recipe (hxrecipe), Project (hx, pgo), Demo, Data
21 Oct 2019 - This tutorial demonstrated how to quantify thickness distribution along the length Learn more
Porosity Clustering Analysis and Distance to Surface
Recipe (hxrecipe), Project (hx, pgo), Demo, Data
21 Oct 2019 - This tutorial demonstrates the steps necessary to quantify porosity distribution and perform a pore distance to surface analysis. Learn more