# Amira Project 202210
# Amira3D
# Generated by Amira3D 2022.1
remove -all
remove "grayScale.am" "CoreSample_CT_7494-00-7497-00.cropped" "CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" "Ortho Slice" "Cylinder Slice Native Z" "Extract Image" "Ortho Slice(2)"

# Create viewers
viewer setVertical 1

viewer 0 setTransparencyType 6
viewer 0 setAutoRedraw 0
viewer 0 show
viewer 1 setTransparencyType 6
viewer 1 setAutoRedraw 0
viewer 1 show
mainWindow show

_units setUnitsManagementMode 0

set hideNewModules 1
[ load ${SCRIPTDIR}/CylinderSliceNativeZ-files/grayScale.am ] setLabel "grayScale.am"
"grayScale.am" setIconPosition 0 0
"grayScale.am" setNoRemoveAll 1
"grayScale.am" setVar "CustomHelp" {HxColormap256}
"grayScale.am" fire
"grayScale.am" setMinMax -1180 3198
"grayScale.am" flags setValue 1
"grayScale.am" shift setMinMax -1 1
"grayScale.am" shift setButtons 0
"grayScale.am" shift setEditButton 1
"grayScale.am" shift setIncrement 0.133333
"grayScale.am" shift setValue 0
"grayScale.am" shift setSubMinMax -1 1
"grayScale.am" scale setMinMax 0 1
"grayScale.am" scale setButtons 0
"grayScale.am" scale setEditButton 1
"grayScale.am" scale setIncrement 0.1
"grayScale.am" scale setValue 1
"grayScale.am" scale setSubMinMax 0 1
"grayScale.am" fire
"grayScale.am" setViewerMask 16383

set hideNewModules 0
[ load ${SCRIPTDIR}/CylinderSliceNativeZ-files/CoreSample_CT_7494-00-7497-00.cropped ] setLabel "CoreSample_CT_7494-00-7497-00.cropped"
"CoreSample_CT_7494-00-7497-00.cropped" setIconPosition 20 10
"CoreSample_CT_7494-00-7497-00.cropped" setVar "CustomXML" {CoreSample_CT_7494-00-7497-00.cropped_config.xml}
"CoreSample_CT_7494-00-7497-00.cropped" sharedColormap disconnect
"CoreSample_CT_7494-00-7497-00.cropped" sharedColormap setDefaultColor 0.8 0.8 0.8
"CoreSample_CT_7494-00-7497-00.cropped" sharedColormap setDefaultAlpha 0.500000
"CoreSample_CT_7494-00-7497-00.cropped" sharedColormap activateLocalRange 1
"CoreSample_CT_7494-00-7497-00.cropped" sharedColormap setLocalMinMax 0.000000 1.000000
"CoreSample_CT_7494-00-7497-00.cropped" sharedColormap enableAlpha 1
"CoreSample_CT_7494-00-7497-00.cropped" sharedColormap enableAlphaToggle 1
"CoreSample_CT_7494-00-7497-00.cropped" sharedColormap setAutoAdjustRangeMode 1
"CoreSample_CT_7494-00-7497-00.cropped" fire
"CoreSample_CT_7494-00-7497-00.cropped" setViewerMask 16383

set hideNewModules 0
create HxOrthoSlice "Ortho Slice"
"Ortho Slice" setIconPosition 346 11
"Ortho Slice" setVar "CustomHelp" {HxOrthoSlice}
"Ortho Slice" setVar "CustomXML" {HxOrthoSlice_config.xml}
"Ortho Slice" data connect "CoreSample_CT_7494-00-7497-00.cropped"
"Ortho Slice" fire
"Ortho Slice" sliceOrientation setValue 0
"Ortho Slice" fire
"Ortho Slice" origin  setBoundingBox -3.40282e+038 3.40282e+038 -3.40282e+038 3.40282e+038 -3.40282e+038 3.40282e+038
"Ortho Slice" origin  setImmediateMode 0
"Ortho Slice" origin  setOrtho 0
"Ortho Slice" origin  showDragger 0
"Ortho Slice" origin  showPoints 0
"Ortho Slice" origin  setPointScale 1
"Ortho Slice" origin  showOptionButton 1
"Ortho Slice" origin  setNumPoints 1 1 1
"Ortho Slice" origin  setCoord 0 0 0 0
"Ortho Slice" normal  setBoundingBox -3.40282e+038 3.40282e+038 -3.40282e+038 3.40282e+038 -3.40282e+038 3.40282e+038
"Ortho Slice" normal  setImmediateMode 0
"Ortho Slice" normal  setOrtho 0
"Ortho Slice" normal  showDragger 0
"Ortho Slice" normal  showPoints 0
"Ortho Slice" normal  setPointScale 1
"Ortho Slice" normal  showOptionButton 1
"Ortho Slice" normal  setNumPoints 1 1 1
"Ortho Slice" normal  setCoord 0 0 0 1
"Ortho Slice" options setValue 0 1
"Ortho Slice" options setToggleVisible 0 1
"Ortho Slice" options setValue 1 0
"Ortho Slice" options setToggleVisible 1 1
"Ortho Slice" options setValue 2 0
"Ortho Slice" options setToggleVisible 2 1
"Ortho Slice" mappingType setIndex 0 0
"Ortho Slice" contrastLimit setMinMax 0 -16777216 16777216
"Ortho Slice" contrastLimit setValue 0 7
"Ortho Slice" colormap connect "grayScale.am"
"Ortho Slice" colormap setDefaultColor 1 0.8 0.5
"Ortho Slice" colormap setDefaultAlpha 1.000000
"Ortho Slice" colormap activateLocalRange 1
"Ortho Slice" colormap setLocalMinMax -1180.000000 3198.000000
"Ortho Slice" colormap enableAlpha 1
"Ortho Slice" colormap enableAlphaToggle 1
"Ortho Slice" colormap setAutoAdjustRangeMode 1
"Ortho Slice" colormap setColorbarMinMax -1180 3198
"Ortho Slice" sliceNumber setMinMax 0 734
"Ortho Slice" sliceNumber setButtons 1
"Ortho Slice" sliceNumber setEditButton 1
"Ortho Slice" sliceNumber setIncrement 1
"Ortho Slice" sliceNumber setValue 367
"Ortho Slice" sliceNumber setSubMinMax 0 734
"Ortho Slice" transparency setValue 0
"Ortho Slice" alpha setMinMax 0 -16777216 16777216
"Ortho Slice" alpha setValue 0 0
"Ortho Slice" alpha setMinMax 1 -16777216 16777216
"Ortho Slice" alpha setValue 1 255
"Ortho Slice" frameSettings setState {item 0 1 item 2 1 color 3 1 0.5 0 }
"Ortho Slice" embossingOnOff setValue 0
"Ortho Slice" depth setMinMax -60 60
"Ortho Slice" depth setButtons 0
"Ortho Slice" depth setEditButton 1
"Ortho Slice" depth setIncrement 8
"Ortho Slice" depth setValue 2
"Ortho Slice" depth setSubMinMax -60 60
"Ortho Slice" fire

"Ortho Slice" fire
"Ortho Slice" setViewerMask 16381
"Ortho Slice" setShadowStyle 3
"Ortho Slice" setPickable 1

set hideNewModules 0
create HxCylinderSliceNativeZ "Cylinder Slice Native Z"
"Cylinder Slice Native Z" setIconPosition 346 36
"Cylinder Slice Native Z" setVar "CustomHelp" {HxCylinderSliceNativeZ}
"Cylinder Slice Native Z" setVar "CustomXML" {HxCylinderSliceNativeZ_config.xml}
"Cylinder Slice Native Z" data connect "CoreSample_CT_7494-00-7497-00.cropped"
"Cylinder Slice Native Z" module connect "Ortho Slice"
"Cylinder Slice Native Z" colormap connect "grayScale.am"
"Cylinder Slice Native Z" colormap setDefaultColor 1 0.8 0.5
"Cylinder Slice Native Z" colormap setDefaultAlpha 0.500000
"Cylinder Slice Native Z" colormap activateLocalRange 1
"Cylinder Slice Native Z" colormap setLocalMinMax -1180.000000 3198.000000
"Cylinder Slice Native Z" colormap enableAlpha 1
"Cylinder Slice Native Z" colormap enableAlphaToggle 1
"Cylinder Slice Native Z" colormap setAutoAdjustRangeMode 1
"Cylinder Slice Native Z" colormap setColorbarMinMax -1180 3198
"Cylinder Slice Native Z" fire
"Cylinder Slice Native Z" zeroAngle setMinMax 0 360
"Cylinder Slice Native Z" zeroAngle setButtons 0
"Cylinder Slice Native Z" zeroAngle setEditButton 1
"Cylinder Slice Native Z" zeroAngle setIncrement 24
"Cylinder Slice Native Z" zeroAngle setValue 0
"Cylinder Slice Native Z" zeroAngle setSubMinMax 0 360
"Cylinder Slice Native Z" showDragger setValue 0 1
"Cylinder Slice Native Z" showDragger setToggleVisible 0 1
"Cylinder Slice Native Z" cylinder setMinMax 0 -3.40282346638529e+038 3.40282346638529e+038
"Cylinder Slice Native Z" cylinder setValue 0 0
"Cylinder Slice Native Z" cylinder setMinMax 1 -3.40282346638529e+038 3.40282346638529e+038
"Cylinder Slice Native Z" cylinder setValue 1 0
"Cylinder Slice Native Z" cylinder setMinMax 2 -3.40282346638529e+038 3.40282346638529e+038
"Cylinder Slice Native Z" cylinder setValue 2 50000000
"Cylinder Slice Native Z" viewer setValue 0 0
"Cylinder Slice Native Z" viewer setToggleVisible 0 1
"Cylinder Slice Native Z" mappingType setIndex 0 0
"Cylinder Slice Native Z" contrastLimit setMinMax 0 0 99
"Cylinder Slice Native Z" contrastLimit setValue 0 7
"Cylinder Slice Native Z" sampling setState {item 0 1 }
"Cylinder Slice Native Z" overlayType setIndex 0 0
"Cylinder Slice Native Z" transparency setValue 0
"Cylinder Slice Native Z" setViewer 2816  422  3331  960  
"Cylinder Slice Native Z" fire
"Cylinder Slice Native Z" setViewerMask 16383
"Cylinder Slice Native Z" select
"Cylinder Slice Native Z" setPickable 1

set hideNewModules 0
create HxCreateImage "Extract Image"
"Extract Image" setIconPosition 160 42
"Extract Image" setVar "CustomHelp" {HxCreateImage}
"Extract Image" setVar "CustomXML" {HxCreateImage_config.xml}
"Extract Image" data connect "Cylinder Slice Native Z"
"Extract Image" fire
"Extract Image" applyTransformToResult 1
"Extract Image" fire
"Extract Image" setViewerMask 16383
"Extract Image" setPickable 1

set hideNewModules 0
[ "Extract Image" action hit; "Extract Image" compute; "Extract Image" getResult ] setLabel "CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice"
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" setIconPosition 20 77
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" setVar "CustomXML" {CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice_config.xml}
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" master connect "Extract Image" "result" 0
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" sharedColormap disconnect
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" sharedColormap setDefaultColor 0.8 0.8 0.8
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" sharedColormap setDefaultAlpha 0.500000
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" sharedColormap activateLocalRange 1
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" sharedColormap setLocalMinMax 0.000000 1.000000
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" sharedColormap enableAlpha 1
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" sharedColormap enableAlphaToggle 1
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" sharedColormap setAutoAdjustRangeMode 1
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" sharedColormap setColorbarMinMax -1012 2335
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" fire
"CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice" setViewerMask 16383

set hideNewModules 0
create HxOrthoSlice "Ortho Slice(2)"
"Ortho Slice(2)" setIconPosition 354 112
"Ortho Slice(2)" setVar "CustomHelp" {HxOrthoSlice}
"Ortho Slice(2)" setVar "CustomXML" {HxOrthoSlice_config.xml}
"Ortho Slice(2)" data connect "CoreSample_CT_7494-00-7497-00.cropped-CylinderSlice"
"Ortho Slice(2)" fire
"Ortho Slice(2)" sliceOrientation setValue 0
"Ortho Slice(2)" fire
"Ortho Slice(2)" origin  setBoundingBox -3.40282e+038 3.40282e+038 -3.40282e+038 3.40282e+038 -3.40282e+038 3.40282e+038
"Ortho Slice(2)" origin  setImmediateMode 0
"Ortho Slice(2)" origin  setOrtho 0
"Ortho Slice(2)" origin  showDragger 0
"Ortho Slice(2)" origin  showPoints 0
"Ortho Slice(2)" origin  setPointScale 1
"Ortho Slice(2)" origin  showOptionButton 1
"Ortho Slice(2)" origin  setNumPoints 1 1 1
"Ortho Slice(2)" origin  setCoord 0 9.20796e+007 3.94375e+008 -4.58959e+008
"Ortho Slice(2)" normal  setBoundingBox -3.40282e+038 3.40282e+038 -3.40282e+038 3.40282e+038 -3.40282e+038 3.40282e+038
"Ortho Slice(2)" normal  setImmediateMode 0
"Ortho Slice(2)" normal  setOrtho 0
"Ortho Slice(2)" normal  showDragger 0
"Ortho Slice(2)" normal  showPoints 0
"Ortho Slice(2)" normal  setPointScale 1
"Ortho Slice(2)" normal  showOptionButton 1
"Ortho Slice(2)" normal  setNumPoints 1 1 1
"Ortho Slice(2)" normal  setCoord 0 0 0 1
"Ortho Slice(2)" options setValue 0 0
"Ortho Slice(2)" options setToggleVisible 0 1
"Ortho Slice(2)" options setValue 1 0
"Ortho Slice(2)" options setToggleVisible 1 1
"Ortho Slice(2)" options setValue 2 0
"Ortho Slice(2)" options setToggleVisible 2 1
"Ortho Slice(2)" mappingType setIndex 0 0
"Ortho Slice(2)" contrastLimit setMinMax 0 -16777216 16777216
"Ortho Slice(2)" contrastLimit setValue 0 7
"Ortho Slice(2)" colormap connect "grayScale.am"
"Ortho Slice(2)" colormap setDefaultColor 1 0.8 0.5
"Ortho Slice(2)" colormap setDefaultAlpha 1.000000
"Ortho Slice(2)" colormap activateLocalRange 1
"Ortho Slice(2)" colormap setLocalMinMax -1012.000000 2335.000000
"Ortho Slice(2)" colormap enableAlpha 1
"Ortho Slice(2)" colormap enableAlphaToggle 1
"Ortho Slice(2)" colormap setAutoAdjustRangeMode 1
"Ortho Slice(2)" colormap setColorbarMinMax -1012 2335
"Ortho Slice(2)" sliceNumber setMinMax 0 0
"Ortho Slice(2)" sliceNumber setButtons 1
"Ortho Slice(2)" sliceNumber setEditButton 1
"Ortho Slice(2)" sliceNumber setIncrement 1
"Ortho Slice(2)" sliceNumber setValue 0
"Ortho Slice(2)" sliceNumber setSubMinMax 0 0
"Ortho Slice(2)" transparency setValue 0
"Ortho Slice(2)" alpha setMinMax 0 -16777216 16777216
"Ortho Slice(2)" alpha setValue 0 0
"Ortho Slice(2)" alpha setMinMax 1 -16777216 16777216
"Ortho Slice(2)" alpha setValue 1 255
"Ortho Slice(2)" frameSettings setState {item 0 1 item 2 1 color 3 1 0.5 0 }
"Ortho Slice(2)" embossingOnOff setValue 0
"Ortho Slice(2)" depth setMinMax -60 60
"Ortho Slice(2)" depth setButtons 0
"Ortho Slice(2)" depth setEditButton 1
"Ortho Slice(2)" depth setIncrement 8
"Ortho Slice(2)" depth setValue 2
"Ortho Slice(2)" depth setSubMinMax -60 60
"Ortho Slice(2)" fire

"Ortho Slice(2)" fire
"Ortho Slice(2)" setViewerMask 16382
"Ortho Slice(2)" setShadowStyle 3
"Ortho Slice(2)" setPickable 1

set hideNewModules 0

viewer 0 setCameraOrientation 1 0 0 3.14159
viewer 0 setCameraPosition 0 0 -2.52317e+8
viewer 0 setCameraFocalDistance 2.52367e+8
viewer 0 setCameraNearDistance 2.52065e+8
viewer 0 setCameraFarDistance 2.5267e+8
viewer 0 setCameraType perspective
viewer 0 setCameraHeightAngle 44.9023
viewer 0 setAutoRedraw 1
viewer 0 redraw

viewer 1 setCameraOrientation 1 0 0 3.14159
viewer 1 setCameraPosition 9.20796e+7 3.94375e+8 -1.79182e+9
viewer 1 setCameraFocalDistance 1.33286e+9
viewer 1 setCameraNearDistance 1.33153e+9
viewer 1 setCameraFarDistance 1.33419e+9
viewer 1 setCameraType perspective
viewer 1 setCameraHeightAngle 44.9023
viewer 1 setAutoRedraw 1
viewer 1 redraw

"Cylinder Slice Native Z" colormap interconnect "PermanentColormapEditor" colormap
correlationPanel closeTabs
correlationPanel setTabName 0 "Correlation 1"
correlationPanel 0 setLogScalingOnAxis 0 0
correlationPanel 0 setLogScalingOnAxis 1 0

histogramPanel closeTabs
histogramPanel setTabName 0 "Histogram 1"
histogramPanel 0 setLogScalingOnAxis 0 0
histogramPanel 0 setLogScalingOnAxis 1 1

theObjectPool setSelectionOrder {Cylinder Slice Native Z}
