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Extracting insights from complex life science and biomedical image data can be challenging and time-consuming.
Thermo Scientific Amira 3D Pro Software leverages AI and deep learning to streamline image processing workflows, offering powerful tools for pre-processing, segmentation, and quantitative analysis.
The AI-based Segmentation+ workroom simplifies segmentation with manual annotation, model training, and automatic segmentation. Amira Software’s automated workflows, combined with comprehensive training and consulting services, ensure you can efficiently handle large datasets and maximize productivity.
Discover how Amira Software accelerates your journey from image acquisition to understanding, enhancing accuracy and efficiency in both research and industrial applications.
Amira 3D Pro Software offers a comprehensive set of advanced filters that significantly enhance pre-processing capabilities for image quality improvement, artifact removal, and segmentation facilitation. These filters perform crucial tasks such as linear scaling of grayscale values, contrast enhancement, edge preservation, and background noise reduction. They also address specific challenges like eliminating beam hardening artifacts and unifying inhomogeneous raw data. Additionally, Amira Software is proficient at segmenting fine details in complex samples, performing multi-scale structural analysis, and separating grains and particle objects.
If you find manual segmentation time-consuming and challenging, Amira 3D Pro Software’s advanced tools can help streamline and enhance your segmentation process by automating tasks and improving image quality.
Amira Software offers automatic thresholding to binarize grayscale images efficiently, interactive thresholding for elements of the same intensity, and local thresholding for binary segmentation of image stacks into foreground and background objects. When thresholding alone is insufficient, the fast watershed principle can be applied to achieve precise segmentation, and top-hat segmentation is available for extracting small elements and details from images.
A range of morphological operations, including opening, closing, and erosion, help refine segmentation by removing isolated points, shrinking peaks, and disconnecting particles. Dilation and filling holes operations further enhance segmentation by enlarging particle sizes and connecting neighboring ones, supporting a coherent and accurate segmentation outcome.
When traditional segmentation methods fall short for your complex images, Amira 3D Pro Software offers AI-powered solutions to handle even the most challenging tasks.
Texture supervised classification uses machine learning to perform image segmentation based on local textural features. Additionally, 3D image-based deep learning model training enhances the quality of your segmentation.
The new Segmentation+ workroom features AI-Assisted Segmentation, allowing automatic segmentation of an entire image based on a small annotation and generation of a global selection that can be edited before labeling the material.
This combination of manual annotation, model training, and segmentation in a convenient workroom provides a robust solution for complex image analysis.
The true value of segmented images is unlocked when the detected features are measured and the numerical outputs are provided. Amira Software includes Analysis Filter and Filter by Measure, to remove labels that do not meet specific criteria, and Image Arithmetic, to perform mathematical operations. Logical Operations like AND Image and Invert allow masking and combining of bit planes.
Additionally, Amira Software computes the volume fraction of binary or label images and generates binary images of paths connecting two planes through Axis Connectivity. Labeling performs connectivity analysis of objects within the entire 3D volume, and Multi-Class Segmentation automatically labels multiple features simultaneously.
The Analysis to Spreadsheet feature converts your analysis into regular spreadsheets, making data handling and reporting efficient.
Automated image processing workflows are crucial for efficient and reproducible scientific research and industrial applications. Amira Software enables you to create, customize, and automate image processing and analysis workflows, including AI-based processes, without requiring any programming skills. The intuitive interface allows you to save and reuse recipes for consistency, efficiently handle large datasets, and even merge existing recipes into new ones to boost productivity and simplify image analysis. Additionally, trained models can be seamlessly integrated into the recipe workflow, enhancing accuracy and reliability.
Maximize the potential of Amira 3D Pro Software with our comprehensive training and consulting services. Our tailored training programs, whether introductory, advanced, or customized, equip you with practical skills specific to your goals and can be delivered on-site or at our facilities. Our consulting services offer solution customization, including dedicated user interfaces, workflow optimization, and image processing as a service.
With 30 years of experience and hundreds of successful projects, we provide solutions such as workroom development, standalone applications, and deep learning model training and deployment.
For Research Use Only. Not for use in diagnostic procedures.