Assay Details

Gene Symbol: CTCF
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001191022.1	NP_001177951.1	6 - 7	999		69
	NM_006565.3	NP_006556.1	8 - 9	1960		69
	XM_005255775.3	XP_005255832.1	8 - 9	1960		69
	XM_017022868.1	XP_016878357.1	8 - 9	1710		69
	XM_017022869.1	XP_016878358.1	8 - 9	1709		69
GenBank mRNA	AB209793.1	-	6 - 7	833		69
	AK314804.1	-	8 - 9	1958		69
	BC014267.2	-	8 - 9	1794	3840827	69
	BT009915.1	-	6 - 7	1516		69
	U25435.1	-	8 - 9	1807		69

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1600008166.hg.1
This assay targets the same location as HTA transcript cluster(s) TC16000542.hg.1

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

Mammalian Gene Collection

Recommended Assay

Homo sapiens

Inventoried

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CTCF

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16007731.hg.1	ENST00000264010.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16007731.hg.1	ENST00000401394.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16007731.hg.1	NM_001191022.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16007731.hg.1	NM_006565.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16007731.hg.1	TC16000542.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	ENST00000566078.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	TC1600008166.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	PSR1600160815.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1600160815.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600160815.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600160815.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	PSR1600160815.hg.1	ENST00000264010.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1600160815.hg.1	ENST00000401394.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600160815.hg.1	NM_001191022.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600160815.hg.1	NM_006565.3	Refseq
Affymetrix Human Clariom D Assay	PSR1600160815.hg.1	TC1600008166.hg.1	Clariom D TC

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Catalog #	4331182
Price	284.00
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System Message

Genomic Map