Assay Details

Gene Symbol: RNF39
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_025236.4	NP_079512.3	1 - 2	550		75
RefSeq	NM_170769.3	NP_739575.3	1 - 2	550		75
GenBank mRNA	AF238315.1	-	1 - 2	633		75
GenBank mRNA	AF238316.1	-	1 - 2	630		75

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600011349.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06001493.hg.1, TC6_apd_hap1000066.hg.1, TC6_cox_hap2000130.hg.1, TC6_dbb_hap3000119.hg.1, TC6_mann_hap4000108.hg.1, TC6_mcf_hap5000110.hg.1, TC6_qbl_hap6000120.hg.1, TC6_ssto_hap7000111.hg.1

Set Membership:

Ambion siRNA available

Amplicon length between 71 and 85

Homo sapiens

Inventoried

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene RNF39

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000910.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000910.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000910.hg.1	TC6_apd_hap1000066.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001957.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001957.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001957.hg.1	TC6_mcf_hap5000110.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06016773.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06016773.hg.1	ENST00000376751.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06016773.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06016773.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06016773.hg.1	TC06001493.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001756.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001756.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001756.hg.1	TC6_mann_hap4000108.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7002010.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7002010.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7002010.hg.1	TC6_ssto_hap7000111.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011349.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06016774.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06016774.hg.1	ENST00000376746.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06016774.hg.1	ENST00000376751.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06016774.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06016774.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06016774.hg.1	TC06001493.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2002236.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2002236.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2002236.hg.1	TC6_cox_hap2000130.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06016775.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06016775.hg.1	ENST00000376751.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06016775.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06016775.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06016775.hg.1	TC06001493.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000909.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000909.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_apd_hap1000909.hg.1	TC6_apd_hap1000066.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001958.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001958.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5001958.hg.1	TC6_mcf_hap5000110.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3002167.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3002167.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3002167.hg.1	TC6_dbb_hap3000119.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001757.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001757.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001757.hg.1	TC6_mann_hap4000108.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6002212.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6002212.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6002212.hg.1	TC6_qbl_hap6000120.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6002213.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6002213.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6002213.hg.1	TC6_qbl_hap6000120.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7002011.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7002011.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7002011.hg.1	TC6_ssto_hap7000111.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2002237.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2002237.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2002237.hg.1	TC6_cox_hap2000130.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3002166.hg.1	NM_025236.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3002166.hg.1	NM_170769.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3002166.hg.1	TC6_dbb_hap3000119.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0600176404.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600176404.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600176404.hg.1	NM_025236.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600176404.hg.1	NM_170769.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600176404.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600176404.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600176404.hg.1	NM_025236.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600176404.hg.1	NM_170769.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600176404.hg.1	TC0600011349.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	NM_025236.3	Refseq
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	NM_170769.2	Refseq
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	NM_170769.2	Refseq
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	NM_170769.2	Refseq
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	NM_170769.2	Refseq
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	NM_170769.2	Refseq
Affymetrix Human Clariom D Assay	TC0600011349.hg.1	NM_170769.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600176403.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600176403.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600176403.hg.1	NM_025236.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600176403.hg.1	NM_170769.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600176403.hg.1	ENST00000244360.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600176403.hg.1	ENST00000376751.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0600176403.hg.1	NM_025236.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600176403.hg.1	NM_170769.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600176403.hg.1	TC0600011349.hg.1	Clariom D TC

Availability	Inventoried
Catalog #	4331182
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System Message

Genomic Map