Assay Details

Gene Symbol: CCDC9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_015603.2	NP_056418.1	3 - 4	315		100
RefSeq	XM_017026578.1	XP_016882067.1	3 - 4	360		100
GenBank mRNA	AK302153.1	-	3 - 4	290		100
	AL050284.1	-	3 - 4	254		100
	BC002787.2	-	3 - 4	211	3615928	100
	BC009743.2	-	3 - 4	211	3832697	100
	BM737911.1	-	3 - 4	315		100
	CR977312.1	-	3 - 4	231		100

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1900008415.hg.1
This assay targets the same location as HTA transcript cluster(s) TC19000674.hg.1

Set Membership:

Ambion siRNA available

Amplicon length between 86 and 100

Mammalian Gene Collection

Recommended Assay

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CCDC9

Gene Ontology Categories:

Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR19009426.hg.1	ENST00000221922.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19009426.hg.1	ENST00000504556.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19009426.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19009426.hg.1	TC19000674.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000596938.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000596938.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000596938.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000596938.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000600117.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000600117.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000600117.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000600117.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000601154.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	ENST00000601154.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000596938.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000596938.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000596938.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000596938.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000600117.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000600117.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000600117.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000600117.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000601154.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	ENST00000601154.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	TC1900008415.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	PSR1900164647.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164647.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164647.hg.1	ENST00000596938.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164647.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164647.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	PSR1900164647.hg.1	TC1900008415.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900164647.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164647.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164647.hg.1	ENST00000596938.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164647.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164647.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	PSR1900164648.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164648.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164648.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164648.hg.1	NM_015603.2	Refseq
Affymetrix Human Clariom D Assay	PSR1900164648.hg.1	TC1900008415.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900164648.hg.1	ENST00000221922.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164648.hg.1	ENST00000595659.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164648.hg.1	ENST00000599398.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900164648.hg.1	NM_015603.2	Refseq

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System Message

Genomic Map