Assay Details

Gene Symbol: SLC48A1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017842.3	NP_060312.2	2 - 3	367		66
	XM_005269016.4	XP_005269073.1	3 - 4	436		66
	XM_017019617.3	XP_016875106.1	2 - 3	367		66
	XM_047429134.1	XP_047285090.1	4 - 5	655		66
GenBank mRNA	AK000496.1	-	2 - 3	397		66
	AK294075.1	-	2 - 3	335		66
	BC002759.2	-	3 - 4	341		66
	BC011823.2	-	2 - 3	247		66
	BC026344.1	-	2 - 3	367		66
	BC065033.1	-	2 - 3	369		66
	BI548780.1	-	2 - 3	425		66

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200012622.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12000340.hg.1

Additional Information:

This assay is in the 5'UTR region of the BC026344.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

3' Most

Mammalian Gene Collection

Recommended Assay

Homo sapiens

Inventoried

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SLC48A1

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR12004277.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004277.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004277.hg.1	ENST00000547002.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004277.hg.1	NM_017842.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12004277.hg.1	TC12000340.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12004281.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004281.hg.1	NM_017842.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12004281.hg.1	TC12000340.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000461620.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000461620.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000476104.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000476104.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000476104.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12004279.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004279.hg.1	NM_017842.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12004279.hg.1	TC12000340.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1200012620.hg.1	ENST00000552003.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200012620.hg.1	ENST00000552003.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004282.hg.1	ENST00000432662.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004282.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004282.hg.1	NM_017842.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12004282.hg.1	TC12000340.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR12004276.hg.1	ENST00000432662.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004276.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004276.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004276.hg.1	ENST00000547002.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12004276.hg.1	NM_017842.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12004276.hg.1	TC12000340.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1200199766.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199766.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	PSR1200199766.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199766.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	PSR1200199766.hg.1	TC1200012622.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200199763.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199763.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199763.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199763.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	PSR1200199763.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199763.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199763.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199763.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	PSR1200199763.hg.1	TC1200012622.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1200012620.hg.1	ENST00000552003.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012620.hg.1	ENST00000552003.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000442892.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000461620.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000461620.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000476104.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000476104.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000476104.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	TC1200012622.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	PSR1200199765.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199765.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199765.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	PSR1200199765.hg.1	ENST00000442218.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199765.hg.1	ENST00000551301.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200199765.hg.1	NM_017842.2	Refseq
Affymetrix Human Clariom D Assay	PSR1200199765.hg.1	TC1200012622.hg.1	Clariom D TC

Availability	Inventoried
Catalog #	4331182
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System Message

Genomic Map