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- Gene Symbol:
-
SCARNA9 - Gene Name:
- small Cajal body-specific RNA 9
- Gene Aliases:
- Z32, mgU2-19/30
- Chromosome Location:
- Chr.11: 93721514 - 93721866 on Build GRCh38
- Species:
- Human
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: SCARNA9 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_002569.2 | 1 | 251 | 143 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1100008788.hg.1This assay targets the same location as HTA transcript cluster(s) TC11000910.hg.1
Set Membership: |
Amplicon length greater than or equal to 101
3' Most
Detect Genomic DNA
Recommended Assay
Homo sapiens
Inventoried
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3290443 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_3796 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 42918 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3290443 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_33_P3290443 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28379008 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07953291 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28379003 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07953281 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16491305 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28379014 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07953279 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28379012 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28379011 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07953280 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28379011 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07953291 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07953280 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07953279 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16491305 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28379003 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P07953281 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28379012 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28379014 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28379008 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07953346 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07953356 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07953349 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07953285 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07953287 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07953354 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07953281 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07953283 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07953279 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07953291 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P07953352 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NR_002569_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 7943159 | - | - |
| Affymetrix Human Gene 1.0 ST Array | 7943161 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 7943158 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 7943160 | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011403.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011403.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011403.hg.1 | TC11000910.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011406.hg.1 | ENST00000362805.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011406.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011406.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011406.hg.1 | TC11000910.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011405.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011405.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011405.hg.1 | TC11000910.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011404.hg.1 | ENST00000364329.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011404.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011404.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR11011404.hg.1 | TC11000910.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009217.hg.1 | ENST00000364722.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009217.hg.1 | ENST00000365012.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009217.hg.1 | NR_023358.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009217.hg.1 | NR_023358.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009217.hg.1 | NR_023358.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0X00009217.hg.1 | NR_023358.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1100008788.hg.1 | ENST00000362805.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1100008788.hg.1 | ENST00000364329.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1100008788.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1100008788.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1100008788.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1100008788.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1100008788.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1100008788.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1100008788.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1100008788.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100164830.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100164830.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100164830.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100164830.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100164830.hg.1 | TC1100008788.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC1100008788.hg.1 | ENST00000362805.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1100008788.hg.1 | ENST00000364329.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1100008788.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1100008788.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1100008788.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1100008788.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1100008788.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC1100008788.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC1100008788.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC1100008788.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100164829.hg.1 | ENST00000364329.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100164829.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100164829.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100164829.hg.1 | ENST00000364329.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100164829.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100164829.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100164829.hg.1 | TC1100008788.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1100164832.hg.1 | ENST00000362805.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100164832.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100164832.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100164832.hg.1 | ENST00000362805.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100164832.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100164832.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100164832.hg.1 | TC1100008788.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC0X00009217.hg.1 | ENST00000364722.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00009217.hg.1 | ENST00000365012.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0X00009217.hg.1 | NR_023358.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00009217.hg.1 | NR_023358.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00009217.hg.1 | NR_023358.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0X00009217.hg.1 | NR_023358.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100164828.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100164828.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100164828.hg.1 | ENST00000530422.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100164828.hg.1 | NR_002569.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100164828.hg.1 | TC1100008788.hg.1 | Clariom D TC |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A046863 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A046863 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_1805064 | NR_002569.2 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1805064 | NR_002569.2 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_1805064 | NR_002569.2 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1805064 | NR_002569.2 | human_transcriptome |
| Illumina Sentrix Human-6 v2 Expression BeadChip | 840639 | - | - |
| Illumina HumanRef-6 v2.0 expression beadchip | ILMN_25861 | - | - |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1805064 | NR_002569.2 | human_transcriptome |
| Illumina HumanHT-12 V3.0 expression beadchip | ILMN_1805064 | NR_002569.2 | human_transcriptome |
| Illumina HumanWG-6_V2_0_R2 | ILMN_1805064 | NR_002569.2 | human_transcriptome |
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