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- Gene Symbol:
-
Opn1sw - Gene Name:
- opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)
- Gene Aliases:
- AW551857, Bcp
- Chromosome Location:
- Chr.6: 29376671 - 29388729 on Build GRCm38
- Species:
- Mouse
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Opn1sw | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_007538.3 | NP_031564.1 | 4 - 5 | 1017 | 64 | |
| GenBank mRNA | AF190670.1 | - | 4 - 5 | 979 | 64 | |
| BC026021.1 | - | 4 - 5 | 984 | 4511808 | 64 | |
| BC058267.1 | - | 4 - 5 | 965 | 6489727 | 64 | |
| U49720.1 | - | 4 - 5 | 919 | 64 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0600001980.mm.1Set Membership: |
Ambion siRNA available
Amplicon length less than or equal to 70
G-protein coupled receptor
3' Most
Mammalian Gene Collection
Recommended Assay
Mus musculus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P1965886 | BC026021.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P1965886 | NM_007538.3 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 942089 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 241688 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P163768 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P1965886 | BC026021.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P1965886 | NM_007538.3 | mouse_transcriptome |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326101 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326094 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326093 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326114 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326102 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326078 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326079 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326116 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326106 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326110 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326092 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326084 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326096 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326073 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326076 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326105 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326083 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326098 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326112 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326087 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326107 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326111 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326091 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326080 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326075 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326085 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326082 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24326089 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P163768 | - | - |
| Whole Mouse Genome G4122A | A_52_P34185 | BC026021.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P34185 | NM_007538.3 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P121476 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P163768 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P05643615 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P05643617 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P05643623 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P05643616 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P05643609 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326101 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326071 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326068 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326106 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326112 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326084 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326144 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326070 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326110 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326096 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326078 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326130 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326134 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326139 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326114 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326089 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326131 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326123 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326118 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326079 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326087 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326080 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326127 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326076 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326125 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326138 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326111 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326073 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326105 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326069 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326093 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326136 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326146 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326064 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326120 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326075 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326082 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326128 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24326133 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05292725 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05786687 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326080 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05643623 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05825168 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05643609 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05643613 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05786685 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05643616 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05643615 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326064 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05275350 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326079 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05292716 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05643621 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326111 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326063 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05643611 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05292726 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326112 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326116 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326076 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326108 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326068 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326120 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326136 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05643617 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326107 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05738228 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05292718 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05833790 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326078 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05643626 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05381327 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326138 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326118 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05323660 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05323657 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326114 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05290634 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05323656 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05833787 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P24326102 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05643612 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05786688 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05275349 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P05290631 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10543596 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10543593 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10543592 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10543598 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10543597 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10543599 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10543594 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10543595 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1449132_PM_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1418552_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10543591 | - | - |
| Mouse Genome 430 2.0 Array | 1418552_at | - | - |
| Mouse Genome 430 2.0 Array | 1418552_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1449132_at | - | - |
| Mouse Genome 430 2.0 Array | 1449132_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 12057_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 12057_PM_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR0600015535.mm.1 | TC0600001980.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0600015535.mm.1 | NM_007538.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0600015535.mm.1 | NM_007538.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0600015536.mm.1 | TC0600001980.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0600015536.mm.1 | NM_007538.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0600015536.mm.1 | NM_007538.3 | Refseq |
| Mouse Expression Set 430 | 1449132_at | - | - |
| Mouse Expression Set 430 | 1418552_PM_at | - | - |
| Mouse Expression Set 430 | 1418552_at | - | - |
| Mouse Expression Set 430 | 1449132_PM_at | - | - |
| Murine Genome U74v2 Set | 99395_PM_at | - | - |
| Murine Genome U74v2 Set | 99395_at | - | - |
| Mouse Genome 430A 2.0 Array | 1449132_at | - | - |
| Mouse Genome 430A 2.0 Array | 1449132_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1418552_at | - | - |
| Mouse Genome 430A 2.0 Array | 1418552_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1418552_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1449132_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1418552_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1449132_PM_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 360138 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| MouseWG-6 v2 Expression BeadChip | 6420377 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 6420377 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0006420377 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2593541 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2593541 | - | - |
| mouse-6 v1.1 (Illumina) | scl29212.6_52-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 6420377 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl29212.6_52-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 6420377 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2593541 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2893131 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2893131 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2593541 | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (3) | scl29212.6_52-S | - | - |
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