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          • Home
          • › Search Tool
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          • › Mm00466679_m1
          See other JMJD6 GE Assays ›
          Gene Symbol:
          Jmjd6
          Gene Name:
          jumonji domain containing 6
          Gene Aliases:
          5730436I23Rik, D11Ertd195e, PSR, PtdSerR, Ptdsr, mKIAA0585
          Chromosome Location:
          Chr.11: 116837432 - 116843449 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm00466679_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Jmjd6
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_033398.2 NP_203971.2 2 - 3 776 99
          GenBank mRNA AF304118.1 - 2 - 3 709 99
          AK122317.1 - 2 - 3 617 99
          BC006067.1 - 2 - 3 585 99
          BC011503.1 - 2 - 3 608 99
          BC056629.1 - 2 - 3 776 5033487 99
          BC117737.1 - 1 - 2 417 99
          CX210791.1 - 2 - 3 482 99
          EF527404.1 - 2 - 3 776 99
          EF527405.1 - 2 - 3 562 99

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC1100004127.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Jmjd6

          Panther Classification:

          Molecular Function -

          protein modifying enzyme

          Gene Ontology Categories:

          Function(s) Process(es)

          blood vessel development
          kidney development
          sprouting angiogenesis
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          mRNA processing
          cell surface receptor signaling pathway
          multicellular organism development
          heart development
          RNA splicing
          chromatin modification
          peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
          cell differentiation
          lung development
          T cell differentiation in thymus
          macrophage activation
          apoptotic cell clearance
          recognition of apoptotic cell
          regulation of mRNA splicing, via spliceosome
          erythrocyte development
          oxidation-reduction process
          retina development in camera-type eye
          histone H3-R2 demethylation
          histone H4-R3 demethylation
          sulfonate dioxygenase activity
          RNA binding
          single-stranded RNA binding
          receptor activity
          iron ion binding
          protein binding
          oxidoreductase activity
          2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity
          procollagen-proline dioxygenase activity
          histone demethylase activity (H3-R2 specific)
          histone demethylase activity (H4-R3 specific)
          hypophosphite dioxygenase activity
          identical protein binding
          DNA-N1-methyladenine dioxygenase activity
          metal ion binding
          dioxygenase activity
          C-19 gibberellin 2-beta-dioxygenase activity
          C-20 gibberellin 2-beta-dioxygenase activity
          peptidyl-lysine 5-dioxygenase activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161572 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161573 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161568 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161570 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161566 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161571 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161567 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161569 - -
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_66_P114543 EF527405.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_66_P114543 BC056629.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_66_P114543 BC117737.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_66_P114543 CX210791.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_66_P114543 EF527404.1 mouse_transcriptome
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 371547 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 499524 M84742.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 499524 NM_007723.2 refseq_mrna_mouse_NM
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 499524 U19717.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 909403 AF203969.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 909403 AK004317.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 909403 AK010566.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 909403 AK045238.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 909403 AK149953.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 909403 AK157205.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 909403 AK158036.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 909403 AK170842.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 909403 AK171838.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 909403 AK215308.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 909403 BC006748.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 909403 BC023297.1 genbank_mrna_mouse
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 909403 NM_018813.2 refseq_mrna_mouse_NM
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 112631 - -
          Agilent SurePrint G3 Mouse CGH Microarray 4x180K 10243 - -
          Agilent Mouse Genome CGH Microarray 44K G4426B A_53_P158441 - -
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_66_P114543 EF527405.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_66_P114543 BC056629.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_66_P114543 BC117737.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_66_P114543 CX210791.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_66_P114543 EF527404.1 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_52_P428721 AK122317.1 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_52_P428721 BC051491.1 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_51_P332952 BC056629.1 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_51_P332952 BP769727.1 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_51_P332952 AF304118.1 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_51_P332952 BC006067.1 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_51_P332952 NM_033398.2 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_52_P162466 AK122317.1 mouse_transcriptome
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161549 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161542 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161564 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161566 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161538 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161547 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161559 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161562 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161565 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161543 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161540 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161550 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161572 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161537 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161554 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161552 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161546 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161567 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161557 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161545 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161558 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161570 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161536 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161535 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161541 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161573 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161569 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P28161555 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_67_P07506523 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_53_P158441 - -
          Whole Mouse Genome G4122A A_52_P428721 AK122317.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P428721 BC051491.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P332952 BC056629.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P332952 BP769727.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P332952 AF304118.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P332952 BC006067.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P332952 NM_033398.2 mouse_transcriptome
          Whole Mouse Genome G4122A A_52_P162466 AK122317.1 mouse_transcriptome
          Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P114543 EF527405.1 mouse_transcriptome
          Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P114543 BC056629.1 mouse_transcriptome
          Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P114543 BC117737.1 mouse_transcriptome
          Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P114543 CX210791.1 mouse_transcriptome
          Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P114543 EF527404.1 mouse_transcriptome
          Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P132073 - -
          Agilent Mouse Genome CGH Microarray 105A (G4416A) A_53_P158441 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P09565395 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P09565391 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161569 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161572 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161570 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161568 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161566 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161571 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161573 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P28161567 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161545 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161510 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161481 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161536 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161499 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161477 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161535 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161547 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161569 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161559 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161542 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161564 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161540 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161562 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161549 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161552 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161501 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161507 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161550 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161543 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161495 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161538 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161508 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161503 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161485 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161528 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161487 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161505 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161573 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161558 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161546 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161554 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161567 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161570 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P28161479 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161564 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161573 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161567 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161558 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161532 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161552 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161528 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161538 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161537 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P09319766 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161549 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161542 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P09319772 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161572 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161562 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161531 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161546 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161559 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P09494008 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161535 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161536 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P28161550 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P09494011 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Gene 1.0 ST Array 10393388 - -
          Affymetrix Mouse Gene 1.0 ST Array 10393390 - -
          Affymetrix Mouse Gene 1.0 ST Array 10393389 - -
          Affymetrix Mouse Gene 1.0 ST Array 10393394 - -
          Affymetrix Mouse Gene 1.0 ST Array 10393391 - -
          Affymetrix Mouse Gene 1.0 ST Array 10393393 - -
          Affymetrix Mouse Gene 1.0 ST Array 10393392 - -
          Affymetrix HT MG-430 PM Array Plate 1454109_PM_a_at - -
          Affymetrix HT MG-430 PM Array Plate 1420056_PM_s_at - -
          Affymetrix HT MG-430 PM Array Plate 1420057_PM_at - -
          Affymetrix Mouse Gene 1.1 ST Array 10393387 - -
          Mouse Genome 430 2.0 Array 1441602_PM_at - -
          Mouse Genome 430 2.0 Array 1454109_a_at - -
          Mouse Genome 430 2.0 Array 1420056_s_at - -
          Mouse Genome 430 2.0 Array 1441602_at - -
          Mouse Genome 430 2.0 Array 1420056_PM_s_at - -
          Mouse Genome 430 2.0 Array 1454109_PM_a_at - -
          Mouse Genome 430 2.0 Array 1420057_at - -
          Mouse Genome 430 2.0 Array 1420057_PM_at - -
          Affymetrix GeneChip Mouse Genome 430 2.0 Array 107817_at - -
          Affymetrix GeneChip Mouse Genome 430 2.0 Array 107817_PM_at - -
          Affymetrix Mouse Clariom S Array PSR1100039165.mm.1 NM_033398.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1100039165.mm.1 NM_033398.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1100039165.mm.1 TC1100004127.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1100039166.mm.1 NM_033398.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1100039166.mm.1 NM_033398.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1100039166.mm.1 TC1100004127.mm.1 MTA TC
          Murine Genome U74v2 Set 95486_at - -
          Murine Genome U74v2 Set 95486_PM_at - -
          Affymetrix HT Mouse Genome 430A Array 1420056_PM_s_at - -
          Affymetrix HT Mouse Genome 430A Array 1454109_PM_a_at - -
          Affymetrix HT Mouse Genome 430A Array 1420056_s_at - -
          Affymetrix HT Mouse Genome 430A Array 1454109_a_at - -
          Affymetrix HT Mouse Genome 430A Array 1420057_at - -
          Affymetrix HT Mouse Genome 430A Array 1420057_PM_at - -
          Array Name Probe IDs Targets Target Type
          ABI Mouse Genome Survey Microarray 907161 - -
          Array Name Probe IDs Targets Target Type
          MouseWG-6 v2 Expression BeadChip 4060100 - -
          Illumina mouse-6 v1.0 expression beadchip 4060100 - -
          Illumina mouseRef-8 v1.0 expression beadchip 0004060100 - -
          Illumina mouseRef-8 v1.1 expression beadchip ILMN_1242377 - -
          Illumina mouse-6 v1.1 expression beadchip ILMN_1242377 - -
          mouse-6 v1.1 (Illumina) scl39292.4_16-S - -
          Illumina Sentrix mouse-6.v1 bead array 4060100 - -
          Illumina Sentrix MouseRef-8 Expression BeadChip scl39292.4_16-S - -
          Illumina Sentrix Mouse-6 Expression BeadChip (2) 4060100 - -
          MouseRef-8 v2 Expression BeadChip ILMN_1242377 - -
          Illumina MouseWG-6 v2.0 expression beadchip ILMN_1242377 - -
          Illumina Sentrix Mouse-6 Expression BeadChip (3) scl39292.4_16-S - -

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