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          • Home
          • › Search Tool
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          • › Mm00468869_m1
          See other HIF1A GE Assays ›
          Gene Symbol:
          Hif1a
          Gene Name:
          hypoxia inducible factor 1, alpha subunit
          Gene Aliases:
          AA959795, HIF1alpha, MOP1, bHLHe78
          Chromosome Location:
          Chr.12: 73901329 - 73947530 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm00468869_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 284.00
          Your Price
          Online offer: 266.65
          266.65
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Hif1a
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_010431.2 NP_034561.2 4 - 5 879 75
          GenBank mRNA AF003695.1 - 4 - 5 713 75
          AK017853.1 - 4 - 5 740 75
          AK034087.1 - 4 - 5 845 75
          AK076395.1 - 2 - 3 167 75
          AK138944.1 - 4 - 5 746 75
          AK150367.1 - 4 - 5 746 75
          BC026139.1 - 4 - 5 731 4019056 75
          X95580.1 - 4 - 5 545 75

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC1200000652.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Mus musculus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Hif1a

          Panther Classification:

          Molecular Function -

          basic helix-loop-helix transcription factor

          Gene Ontology Categories:

          Function(s) Process(es)

          angiogenesis
          blood vessel development
          response to hypoxia
          neural crest cell migration
          epithelial to mesenchymal transition
          embryonic placenta development
          B-1 B cell homeostasis
          vasculature development
          heart looping
          positive regulation of neuroblast proliferation
          connective tissue replacement involved in inflammatory response wound healing
          outflow tract morphogenesis
          cardiac ventricle morphogenesis
          lactate metabolic process
          regulation of glycolytic process
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          regulation of transcription from RNA polymerase II promoter
          transcription from RNA polymerase II promoter
          cellular iron ion homeostasis
          signal transduction
          lactation
          positive regulation of cell proliferation
          visual learning
          regulation of gene expression
          positive regulation of autophagy
          vascular endothelial growth factor production
          positive regulation of vascular endothelial growth factor production
          positive regulation of gene expression
          positive regulation of epithelial cell migration
          positive regulation of receptor biosynthetic process
          response to muscle activity
          axonal transport of mitochondrion
          neural fold elevation formation
          cerebral cortex development
          cell differentiation
          negative regulation of bone mineralization
          positive regulation of vascular endothelial growth factor receptor signaling pathway
          negative regulation of TOR signaling
          oxygen homeostasis
          regulation of transforming growth factor beta2 production
          collagen metabolic process
          negative regulation of transcription elongation from RNA polymerase II promoter
          embryonic hemopoiesis
          positive regulation of insulin secretion involved in cellular response to glucose stimulus
          regulation of cell proliferation
          hemoglobin biosynthetic process
          glucose homeostasis
          positive regulation of apoptotic process
          negative regulation of apoptotic process
          negative regulation of neuron apoptotic process
          regulation of transcription from RNA polymerase II promoter in response to oxidative stress
          positive regulation of erythrocyte differentiation
          positive regulation of transcription, DNA-templated
          negative regulation of vasoconstriction
          negative regulation of growth
          positive regulation of transcription from RNA polymerase II promoter
          muscle cell cellular homeostasis
          positive regulation of hormone biosynthetic process
          blood vessel morphogenesis
          digestive tract morphogenesis
          positive regulation of smooth muscle cell proliferation
          regulation of catalytic activity
          cartilage development
          elastin metabolic process
          intestinal epithelial cell maturation
          response to fungicide
          epithelial cell differentiation involved in mammary gland alveolus development
          retina vasculature development in camera-type eye
          positive regulation of transcription from RNA polymerase II promoter in response to hypoxia
          regulation of thymocyte apoptotic process
          negative regulation of thymocyte apoptotic process
          cellular response to hypoxia
          dopaminergic neuron differentiation
          hypoxia-inducible factor-1alpha signaling pathway
          negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway
          positive regulation of mitophagy
          regulation of aerobic respiration
          negative regulation of reactive oxygen species metabolic process
          negative regulation of mesenchymal cell apoptotic process
          RNA polymerase II transcription factor activity, sequence-specific DNA binding
          transcription factor activity, transcription factor binding
          transcription factor activity, RNA polymerase II transcription factor binding
          transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
          DNA binding
          transcription factor activity, sequence-specific DNA binding
          transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
          signal transducer activity
          protein binding
          transcription factor binding
          enzyme binding
          protein kinase binding
          ubiquitin protein ligase binding
          protein complex binding
          histone acetyltransferase binding
          nuclear hormone receptor binding
          histone deacetylase binding
          sequence-specific DNA binding
          protein heterodimerization activity
          protein dimerization activity
          Hsp90 protein binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Clariom S Array PSR1200004493.mm.1 NM_010431.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1200004493.mm.1 NM_010431.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1200004493.mm.1 TC1200000652.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR1200004494.mm.1 NM_010431.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR1200004494.mm.1 NM_010431.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1200004494.mm.1 TC1200000652.mm.1 MTA TC

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