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- Gene Symbol:
-
Pcdhb5 - Gene Name:
- protocadherin beta 5
- Gene Aliases:
- Pcdhb4A, PcdhbE
- Chromosome Location:
- Chr.18: 37320381 - 37323913 on Build GRCm38
- Species:
- Mouse
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Pcdhb5 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_053130.3 | NP_444360.1 | 1 | 229 | 93 | |
| GenBank mRNA | AK028661.1 | - | 1 | 231 | 93 | |
| AK049825.1 | - | 1 | 219 | 93 | ||
| AY013787.1 | - | 1 | 41 | 93 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC1800000359.mm.1Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
Detect Genomic DNA
Recommended Assay
Mus musculus
1700
Inventoried
Both primers and probe map within a single exon
|
Matching Ambion siRNAs:
Panther Classification:
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P110741 | BC141147.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P110741 | AK049825.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P110741 | NM_053130.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P110741 | AK028661.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P110741 | BC141147.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P110741 | AK049825.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P110741 | NM_053130.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P110741 | AK028661.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 377135 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 833150 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P156541 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P110741 | BC141147.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P110741 | AK049825.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P110741 | NM_053130.3 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P110741 | AK028661.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P110741 | BC141147.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P110741 | AK049825.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P110741 | NM_053130.3 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P110741 | AK028661.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P110741 | BC141147.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P110741 | AK049825.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P110741 | NM_053130.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P110741 | AK028661.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P110741 | BC141147.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P110741 | AK049825.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P110741 | NM_053130.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P110741 | AK028661.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P257292 | AK049825.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P257292 | AY013787.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P257292 | NM_053130.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P257292 | AK028661.1 | mouse_transcriptome |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627802 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627807 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627792 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627806 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627798 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627810 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627796 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627808 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627801 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627803 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627789 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627794 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627791 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627818 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627800 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P31627804 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P156541 | - | - |
| Whole Mouse Genome G4122A | A_52_P110741 | BC141147.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P110741 | AK049825.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P110741 | NM_053130.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P110741 | AK028661.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P110741 | BC141147.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P110741 | AK049825.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P110741 | NM_053130.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P110741 | AK028661.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P257292 | AK049825.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P257292 | AY013787.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P257292 | NM_053130.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P257292 | AK028661.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P134921 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P156541 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P13766321 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P13766311 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P13766313 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P13766344 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P13766340 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627781 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627802 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627880 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627877 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627800 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627882 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627818 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627804 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627835 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627784 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627798 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627801 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627803 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627870 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627808 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627830 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627792 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627780 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627874 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627836 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P31627806 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627803 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627815 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627801 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627794 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627786 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627790 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627818 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627836 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627806 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P13766314 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627804 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627789 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627802 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627787 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627793 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627791 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627792 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627800 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627831 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627830 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627835 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627798 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P13892268 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627810 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627808 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31627796 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P13766310 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10455067 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10455066 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10455068 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1450263_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10455065 | - | - |
| Mouse Genome 430 2.0 Array | 1450263_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1450263_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 93876_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 93876_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR1800002823.mm.1 | NM_053130.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1800002823.mm.1 | NM_053130.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1800002823.mm.1 | TC1800000359.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1800002822.mm.1 | NM_053130.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1800002822.mm.1 | NM_053130.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1800002822.mm.1 | TC1800000359.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR1800002820.mm.1 | NM_053130.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1800002820.mm.1 | NM_053130.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1800002820.mm.1 | TC1800000359.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1450263_at | - | - |
| Mouse Expression Set 430 | 1450263_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1450263_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1450263_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1450263_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1450263_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 367521 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| MouseWG-6 v2 Expression BeadChip | 2060600 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 2060600 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0002060600 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2619321 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2619321 | - | - |
| mouse-6 v1.1 (Illumina) | scl52070.1.15_158-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 2060600 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl52070.1.15_158-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 2060600 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2619321 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2619321 | - | - |
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