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          • Home
          • › Search Tool
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          • › Mm00515945_m1
          See other HDAC6 GE Assays ›
          Gene Symbol:
          Hdac6
          Gene Name:
          histone deacetylase 6
          Gene Aliases:
          Hd6, Hdac5, Sfc6, mHDA2
          Chromosome Location:
          Chr.X: 7930120 - 7947889 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm00515945_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Hdac6
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001130416.1 NP_001123888.1 8 - 9 901 95
          NM_010413.3 NP_034543.3 8 - 9 976 95
          GenBank mRNA AF006603.2 - 7 - 8 661 95
          AK148092.1 - 8 - 9 822 95
          AK148144.1 - 8 - 9 792 95
          AK154099.1 - 8 - 9 840 95
          AK155545.1 - 8 - 9 851 95
          AK155546.1 - 8 - 9 840 95
          BC041105.1 - 8 - 9 824 5352032 95

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC0X00001787.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Hdac6

          Gene Ontology Categories:

          Function(s) Process(es)

          protein polyubiquitination
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          protein deacetylation
          ubiquitin-dependent protein catabolic process
          misfolded or incompletely synthesized protein catabolic process
          intracellular protein transport
          negative regulation of microtubule depolymerization
          response to toxic substance
          positive regulation of signal transduction
          response to organic substance
          regulation of receptor activity
          positive regulation of epithelial cell migration
          positive regulation of receptor biosynthetic process
          macroautophagy
          chromatin modification
          histone deacetylation
          lysosome localization
          peptidyl-lysine deacetylation
          cellular response to topologically incorrect protein
          regulation of gene expression, epigenetic
          ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
          protein complex disassembly
          negative regulation of protein complex disassembly
          regulation of fat cell differentiation
          negative regulation of proteolysis
          mitochondrion localization
          response to misfolded protein
          regulation of establishment of protein localization
          cellular response to hydrogen peroxide
          aggresome assembly
          polyubiquitinated misfolded protein transport
          Hsp90 deacetylation
          response to growth factor
          cellular response to misfolded protein
          positive regulation of chaperone-mediated protein complex assembly
          tubulin deacetylation
          mitophagy in response to mitochondrial depolarization
          positive regulation of hydrogen peroxide-mediated programmed cell death
          core promoter binding
          actin binding
          histone deacetylase activity
          protein binding
          beta-catenin binding
          microtubule binding
          zinc ion binding
          hydrolase activity
          histone deacetylase activity (H3-K14 specific)
          polyubiquitin binding
          ubiquitin protein ligase binding
          NAD-dependent histone deacetylase activity (H3-K14 specific)
          histone deacetylase activity (H3-K9 specific)
          histone deacetylase activity (H4-K16 specific)
          histone deacetylase binding
          tubulin deacetylase activity
          alpha-tubulin binding
          ubiquitin binding
          metal ion binding
          NAD-dependent histone deacetylase activity (H3-K9 specific)
          NAD-dependent histone deacetylase activity (H4-K16 specific)
          tau protein binding
          beta-tubulin binding
          misfolded protein binding
          Hsp90 protein binding
          dynein complex binding
          NAD-dependent histone deacetylase activity (H3-K18 specific)

          MicroArray Probes:

          ABI

          Array Name Probe IDs Targets Target Type
          ABI Mouse Genome Survey Microarray 643415 - -

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