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          • Home
          • › Search Tool
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          • › Mm01151944_m1
          See other SMARCA4 GE Assays ›
          Gene Symbol:
          Smarca4
          Gene Name:
          SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
          Gene Aliases:
          Brg1, HP1-BP72, SNF2beta, SW1/SNF, b2b508.1Clo, b2b692Clo
          Chromosome Location:
          Chr.9: 21616106 - 21704230 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm01151944_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 284.00
          Your Price
          Online offer: 266.65
          266.65
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Smarca4
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001174078.1 NP_001167549.1 2 - 3 480 113
          NM_001174079.1 NP_001167550.1 2 - 3 480 113
          NM_011417.3 NP_035547.2 2 - 3 480 113
          GenBank mRNA AK051530.1 - 2 - 3 269 113
          AK135308.1 - 2 - 3 376 113
          AK142137.1 - 2 - 3 376 113
          AK147285.1 - 2 - 3 434 113
          AK160825.1 - 2 - 3 384 113
          AK166837.1 - 2 - 3 385 113
          BC014760.1 - 2 - 3 291 113
          BC023830.1 - 2 - 3 338 113
          BC032162.1 - 2 - 3 338 113
          BC054056.1 - 2 - 3 322 113
          BC060229.1 - 2 - 3 374 113
          BC061214.1 - 2 - 3 375 113
          BC079560.1 - 2 - 3 480 30533489 113

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC0900000203.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Smarca4

          Panther Classification:

          Molecular Function -

          DNA helicase

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          cell morphogenesis
          blood vessel development
          vasculogenesis
          in utero embryonic development
          blastocyst growth
          blastocyst hatching
          liver development
          outflow tract morphogenesis
          nucleosome assembly
          nucleosome disassembly
          chromatin remodeling
          methylation-dependent chromatin silencing
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          transcription from RNA polymerase II promoter
          nervous system development
          glial cell fate determination
          heart development
          positive regulation of cell proliferation
          DNA methylation on cytosine within a CG sequence
          chromatin modification
          stem cell population maintenance
          neurogenesis
          positive regulation of Wnt signaling pathway
          extracellular matrix organization
          keratinocyte differentiation
          negative regulation of cell growth
          regulation of cell migration
          forebrain development
          hindbrain development
          embryonic hindlimb morphogenesis
          aortic smooth muscle cell differentiation
          ATP-dependent chromatin remodeling
          negative regulation of apoptotic process
          positive regulation of DNA binding
          positive regulation by host of viral transcription
          histone H3 acetylation
          positive regulation of cell differentiation
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription from RNA polymerase II promoter
          embryonic organ morphogenesis
          epidermis morphogenesis
          positive regulation of sequence-specific DNA binding transcription factor activity
          definitive erythrocyte differentiation
          heart trabecula formation
          negative regulation of androgen receptor signaling pathway
          pharyngeal arch artery morphogenesis
          lens fiber cell development
          positive regulation of pri-miRNA transcription from RNA polymerase II promoter
          nucleotide binding
          RNA polymerase II regulatory region sequence-specific DNA binding
          RNA polymerase II core promoter proximal region sequence-specific DNA binding
          RNA polymerase II distal enhancer sequence-specific DNA binding
          RNA polymerase II transcription coactivator activity
          p53 binding
          DNA binding
          chromatin binding
          transcription coactivator activity
          transcription corepressor activity
          helicase activity
          protein binding
          ATP binding
          DNA-dependent ATPase activity
          transcription factor binding
          hydrolase activity
          hydrolase activity, acting on acid anhydrides
          hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
          ATPase activity
          Tat protein binding
          nucleosomal DNA binding
          protein complex binding
          histone binding
          protein N-terminus binding
          androgen receptor binding
          DNA polymerase binding
          lysine-acetylated histone binding

          MicroArray Probes:

          Affymetrix ABI

          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Clariom S Array PSR0900001480.mm.1 NM_001174078.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0900001480.mm.1 NM_001174078.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0900001480.mm.1 NM_001174079.1.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0900001480.mm.1 NM_001174079.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0900001480.mm.1 NM_011417.3.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0900001480.mm.1 NM_011417.3 Refseq
          Affymetrix Mouse Clariom S Array PSR0900001480.mm.1 TC0900000203.mm.1 MTA TC
          Array Name Probe IDs Targets Target Type
          ABI Mouse Genome Survey Microarray 603206 - -

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