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- Gene Symbol:
-
Cthrc1 - Gene Name:
- collagen triple helix repeat containing 1
- Gene Aliases:
- 1110014B07Rik
- Chromosome Location:
- Chr.15: 39076851 - 39087121 on Build GRCm38
- Species:
- Mouse
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Cthrc1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_026778.2 | NP_081054.1 | 2 - 3 | 449 | 75 | |
| GenBank mRNA | AK003674.1 | - | 2 - 3 | 445 | 75 | |
| AK076498.1 | - | 2 - 3 | 452 | 75 | ||
| AK151282.1 | - | 2 - 3 | 450 | 75 | ||
| BC131907.1 | - | 2 - 3 | 425 | 40130184 | 75 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC1500000300.mm.1Set Membership: |
Amplicon length between 71 and 85
Mammalian Gene Collection
Recommended Assay
Mus musculus
1700
Inventoried
Probe spans exons
|
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
cell migration
positive regulation of protein binding
positive regulation of osteoblast proliferation
ossification involved in bone remodeling
positive regulation of osteoblast differentiation
Wnt signaling pathway, planar cell polarity pathway
inner ear receptor stereocilium organization
negative regulation of canonical Wnt signaling pathway
cochlea morphogenesis
establishment of planar polarity involved in neural tube closure
frizzled binding
protein binding
Wnt-protein binding
cell migration
positive regulation of protein binding
positive regulation of osteoblast proliferation
ossification involved in bone remodeling
positive regulation of osteoblast differentiation
Wnt signaling pathway, planar cell polarity pathway
inner ear receptor stereocilium organization
negative regulation of canonical Wnt signaling pathway
cochlea morphogenesis
establishment of planar polarity involved in neural tube closure
frizzled binding
protein binding
Wnt-protein binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30151912 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30151915 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30151913 | - | - |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P453785 | AK151282.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P453785 | NM_026778.2 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P453785 | AK003674.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P453785 | AK076498.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P453785 | AK151282.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P453785 | NM_026778.2 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P453785 | AK003674.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P453785 | AK076498.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 376531 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 779467 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 234649 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 200667 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 737359 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 858145 | AK080681.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 858145 | AK168592.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 858145 | BC016216.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 858145 | BC025115.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 858145 | BC078460.1 | genbank_mrna_mouse |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 858145 | NM_001110254.1 | refseq_mrna_mouse_NM |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 858145 | NM_177358.4 | refseq_mrna_mouse_NM |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 144722 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P150796 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P158432 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P453785 | AK151282.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P453785 | NM_026778.2 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P453785 | AK003674.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P453785 | AK076498.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P453785 | AK151282.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P453785 | NM_026778.2 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P453785 | AK003674.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P453785 | AK076498.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P211702 | AK090258.1 | mouse_transcriptome |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P150796 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P158432 | - | - |
| Whole Mouse Genome G4122A | A_51_P211702 | AK090258.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P453785 | AK151282.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P453785 | NM_026778.2 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P453785 | AK003674.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P453785 | AK076498.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P453785 | AK151282.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P453785 | NM_026778.2 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P453785 | AK003674.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P453785 | AK076498.1 | mouse_transcriptome |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P150796 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P158432 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30151915 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30151912 | - | - |
| Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K | A_68_P30151913 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151978 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151960 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151932 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151944 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151967 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151964 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151939 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30152016 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151950 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151940 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151942 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151945 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151921 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151925 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151956 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30152015 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151936 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151968 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151955 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151914 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151934 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30152021 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151937 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151915 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151917 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151933 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151954 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151976 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151918 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30152014 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151965 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151959 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151935 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151957 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151927 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151910 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151920 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30152018 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151919 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151911 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151923 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P30151929 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151932 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151940 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151907 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12311678 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12311680 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12007162 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151925 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12315651 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151919 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151944 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151936 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12238702 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12465891 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151945 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151911 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12315650 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151939 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151918 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151934 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151950 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151920 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151927 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P12076900 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151937 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151947 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151921 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151923 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151935 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151949 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151910 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P30151928 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10423840 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10423837 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10423841 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10423839 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10423838 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1452968_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10423836 | - | - |
| Mouse Genome 430 2.0 Array | 1452968_at | - | - |
| Mouse Genome 430 2.0 Array | 1452968_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 68588_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 68588_PM_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR1500002155.mm.1 | NM_026778.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1500002155.mm.1 | NM_026778.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1500002155.mm.1 | TC1500000300.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1452968_PM_at | - | - |
| Mouse Expression Set 430 | 1452968_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1452968_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1452968_PM_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 864310 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2713401 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_1225073 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2713401 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2713401 | - | - |
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