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          • Home
          • › Search Tool
          • › Search Results
          • › Mm01195598_m1
          See other CUX1 GE Assays ›
          Gene Symbol:
          Cux1
          Gene Name:
          cut-like homeobox 1
          Gene Aliases:
          CDP, Cutl1, Cux, Cux-1
          Chromosome Location:
          Chr.5: 136248135 - 136567490 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm01195598_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Cux1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001291233.1 NP_001278162.1 4 - 5 842 101
          NM_001291234.1 NP_001278163.1 4 - 5 553 101
          NM_001291238.1 NP_001278167.1 4 - 5 553 101
          NM_001291239.1 NP_001278168.1 4 - 5 842 101
          NM_001291240.1 NP_001278169.1 4 - 5 842 101
          NM_009986.4 NP_034116.3 4 - 5 553 101
          NM_198602.3 NP_941004.2 4 - 5 553 101
          GenBank mRNA AB041595.1 - 4 - 5 689 101
          AK098096.1 - 4 - 5 316 101
          AK133543.1 - 4 - 5 316 101
          AK144932.1 - 4 - 5 1213 101
          AK220173.1 - 4 - 5 309 101
          AY037807.1 - 4 - 5 283 101
          BC014289.1 - 4 - 5 322 101
          BC054370.1 - 4 - 5 276 101
          BC079570.1 - 5 - 6 740 101
          BC090847.1 - 4 - 5 325 30547458 101
          CA317682.1 - 4 - 5 508 101
          U68542.1 - 5 - 6 327 101

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC0500003418.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Recommended Assay Mus musculus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Cux1

          Panther Classification:

          Molecular Function -

          homeodomain transcription factor

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          kidney development
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          transcription from RNA polymerase II promoter
          transport
          intra-Golgi vesicle-mediated transport
          multicellular organism development
          lung development
          auditory receptor cell differentiation
          positive regulation of transcription from RNA polymerase II promoter
          positive regulation of dendrite morphogenesis
          RNA polymerase II regulatory region sequence-specific DNA binding
          transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding
          DNA binding
          chromatin binding
          sequence-specific DNA binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Clariom S Array PSR0500030980.mm.1 TC0500003418.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0500030980.mm.1 NM_009986.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030980.mm.1 NM_198602.3 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030973.mm.1 TC0500003418.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0500030973.mm.1 NM_009986.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030973.mm.1 NM_198602.3 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030974.mm.1 TC0500003418.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0500030974.mm.1 NM_009986.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030974.mm.1 NM_198602.3 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030977.mm.1 TC0500003418.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0500030977.mm.1 NM_009986.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030977.mm.1 NM_198602.3 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030979.mm.1 TC0500003418.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0500030979.mm.1 NM_009986.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030979.mm.1 NM_198602.3 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030981.mm.1 TC0500003418.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0500030981.mm.1 NM_009986.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030981.mm.1 NM_198602.3 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030983.mm.1 TC0500003418.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0500030983.mm.1 NM_009986.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030983.mm.1 NM_198602.3 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030982.mm.1 TC0500003418.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0500030982.mm.1 NM_009986.4 Refseq
          Affymetrix Mouse Clariom S Array PSR0500030982.mm.1 NM_198602.3 Refseq

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