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- Gene Symbol:
-
Alkbh4 - Gene Name:
- alkB, alkylation repair homolog 4 (E. coli)
- Gene Aliases:
- 2010004B12Rik, Abj4
- Chromosome Location:
- Chr.5: 136136145 - 136141802 on Build GRCm38
- Species:
- Mouse
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Alkbh4 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_028070.1 | NP_082346.1 | 2 - 3 | 278 | 80 | |
| GenBank mRNA | AK008083.1 | - | 2 - 3 | 340 | 80 | |
| AK189210.1 | - | 2 - 3 | 98 | 80 | ||
| BC022729.1 | - | 2 - 3 | 278 | 4505097 | 80 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0500001599.mm.1Set Membership: |
Amplicon length between 71 and 85
3' Most
Mammalian Gene Collection
Recommended Assay
Mus musculus
1700
Inventoried
Probe spans exons
|
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
transcription, DNA-templated
regulation of transcription, DNA-templated
protein demethylation
actomyosin structure organization
cleavage furrow ingression
oxidation-reduction process
sulfonate dioxygenase activity
actin binding
oxidoreductase activity
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity
procollagen-proline dioxygenase activity
hypophosphite dioxygenase activity
DNA-N1-methyladenine dioxygenase activity
metal ion binding
dioxygenase activity
C-19 gibberellin 2-beta-dioxygenase activity
C-20 gibberellin 2-beta-dioxygenase activity
transcription, DNA-templated
regulation of transcription, DNA-templated
protein demethylation
actomyosin structure organization
cleavage furrow ingression
oxidation-reduction process
sulfonate dioxygenase activity
actin binding
oxidoreductase activity
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity
procollagen-proline dioxygenase activity
hypophosphite dioxygenase activity
DNA-N1-methyladenine dioxygenase activity
metal ion binding
dioxygenase activity
C-19 gibberellin 2-beta-dioxygenase activity
C-20 gibberellin 2-beta-dioxygenase activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2042396 | BC022729.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2042396 | NM_028070.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2042396 | AK008083.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 406184 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 673186 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P153079 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2042396 | BC022729.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2042396 | NM_028070.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2042396 | AK008083.1 | mouse_transcriptome |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P153079 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P05757394 | - | - |
| Whole Mouse Genome G4122A | A_51_P209965 | AK008083.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P209965 | AK008083.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P209965 | AK008083.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P209965 | AK008083.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P209965 | AK008083.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P209965 | AK008083.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P209965 | AK008083.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P209965 | AK008083.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P209965 | AK008083.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P209965 | AK008083.1 | mouse_transcriptome |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P153079 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119643 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119599 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119589 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119637 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119630 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119635 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119655 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119594 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119664 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119634 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119616 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119596 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119608 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119628 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119663 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119613 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119603 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119622 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119656 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119672 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119606 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119645 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119607 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119660 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119641 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119618 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119665 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119667 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119674 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119650 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119587 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119617 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119620 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119621 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119647 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119657 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119626 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119632 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119669 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119597 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119653 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119604 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24119591 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04499442 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24119665 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24119643 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24119657 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24119650 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24119668 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04434584 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24119674 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24119647 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24119663 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04134935 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04643556 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04434585 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24119664 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24119670 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24119669 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24119644 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24119653 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10526489 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10526492 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10526491 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1429850_PM_x_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1453301_PM_a_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1451432_PM_x_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10526487 | - | - |
| Mouse Genome 430 2.0 Array | 1451432_x_at | - | - |
| Mouse Genome 430 2.0 Array | 1451432_PM_x_at | - | - |
| Mouse Genome 430 2.0 Array | 1453301_a_at | - | - |
| Mouse Genome 430 2.0 Array | 1429850_x_at | - | - |
| Mouse Genome 430 2.0 Array | 1453301_PM_a_at | - | - |
| Mouse Genome 430 2.0 Array | 1429850_PM_x_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 72041_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 72041_PM_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR0500014507.mm.1 | TC0500001599.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500014507.mm.1 | NM_028070.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500014507.mm.1 | NM_028070.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500014500.mm.1 | TC0500001599.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500014500.mm.1 | NM_028070.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500014500.mm.1 | NM_028070.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500014506.mm.1 | TC0500001599.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500014506.mm.1 | NM_028070.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500014506.mm.1 | NM_028070.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500014502.mm.1 | TC0500001599.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500014502.mm.1 | NM_028070.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500014502.mm.1 | NM_028070.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500014504.mm.1 | TC0500001599.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500014504.mm.1 | NM_028070.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500014504.mm.1 | NM_028070.1 | Refseq |
| Mouse Expression Set 430 | 1451432_PM_x_at | - | - |
| Mouse Expression Set 430 | 1453301_a_at | - | - |
| Mouse Expression Set 430 | 1451432_x_at | - | - |
| Mouse Expression Set 430 | 1429850_x_at | - | - |
| Mouse Expression Set 430 | 1453301_PM_a_at | - | - |
| Mouse Expression Set 430 | 1429850_PM_x_at | - | - |
| Mouse Genome 430A 2.0 Array | 1429850_x_at | - | - |
| Mouse Genome 430A 2.0 Array | 1453301_PM_a_at | - | - |
| Mouse Genome 430A 2.0 Array | 1453301_a_at | - | - |
| Mouse Genome 430A 2.0 Array | 1451432_PM_x_at | - | - |
| Mouse Genome 430A 2.0 Array | 1429850_PM_x_at | - | - |
| Mouse Genome 430A 2.0 Array | 1451432_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1429850_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1453301_PM_a_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1451432_PM_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1429850_PM_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1451432_x_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1453301_a_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 811888 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_1226152 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_1226152 | - | - |
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