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- Gene Symbol:
-
Shank1 - Gene Name:
- SH3/ankyrin domain gene 1
- Gene Aliases:
- -
- Chromosome Location:
- Chr.7: 44307848 - 44358353 on Build GRCm38
- Species:
- Mouse
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Shank1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001034115.1 | NP_001029287.1 | 24 - 25 | 5867 | 96 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0700000800.mm.1Set Membership: |
Amplicon length between 86 and 100
3' Most
Recommended Assay
Mus musculus
Probe spans exons
|
Gene Ontology Categories:
Function(s)
Process(es)
protein complex assembly
nervous system development
long-term memory
associative learning
cell differentiation
adult behavior
negative regulation of actin filament bundle assembly
social behavior
protein localization to synapse
olfactory behavior
habituation
neuromuscular process controlling balance
determination of affect
righting reflex
synapse maturation
dendritic spine morphogenesis
positive regulation of dendritic spine development
vocalization behavior
regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity
positive regulation of excitatory postsynaptic potential
protein C-terminus binding
SH3 domain binding
receptor signaling complex scaffold activity
GKAP/Homer scaffold activity
somatostatin receptor binding
protein complex binding
ionotropic glutamate receptor binding
identical protein binding
ankyrin repeat binding
scaffold protein binding
protein complex assembly
nervous system development
long-term memory
associative learning
cell differentiation
adult behavior
negative regulation of actin filament bundle assembly
social behavior
protein localization to synapse
olfactory behavior
habituation
neuromuscular process controlling balance
determination of affect
righting reflex
synapse maturation
dendritic spine morphogenesis
positive regulation of dendritic spine development
vocalization behavior
regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity
positive regulation of excitatory postsynaptic potential
protein C-terminus binding
SH3 domain binding
receptor signaling complex scaffold activity
GKAP/Homer scaffold activity
somatostatin receptor binding
protein complex binding
ionotropic glutamate receptor binding
identical protein binding
ankyrin repeat binding
scaffold protein binding
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P1994550 | NM_001034115.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P1994554 | NM_001034115.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2062181 | - | - |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2062187 | NM_001034115.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P1994550 | NM_001034115.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2062187 | NM_001034115.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P1994554 | NM_001034115.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2062181 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P01505843 | - | - |
| Whole Mouse Genome G4122A | A_51_P172889 | AK082624.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P172889 | NM_001034115.1 | mouse_transcriptome |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086866 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06574232 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06013218 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086865 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086889 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086981 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086898 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086980 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06460316 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06450716 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086892 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086990 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086984 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086919 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086876 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086926 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086995 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086959 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086869 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25087001 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06572586 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086993 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086885 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086842 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086939 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086871 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086849 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086933 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086861 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086907 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086934 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06243605 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086970 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086975 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086963 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086878 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06456674 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086851 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086906 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086937 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086982 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086931 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086927 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086918 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086846 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086905 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086875 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086901 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086888 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086837 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086973 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086991 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086831 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086845 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086949 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086979 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086880 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086986 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06013217 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086948 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086903 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086904 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086951 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086941 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06048967 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086883 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086840 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25087000 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06208456 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086922 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06048960 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086844 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086942 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086977 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06046600 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086834 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086848 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086930 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086877 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086856 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086836 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086894 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086862 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086994 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06454894 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06523744 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06460314 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086968 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086957 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06071676 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086928 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06048972 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06252224 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086859 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086863 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086958 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06456668 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086881 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086902 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086965 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086838 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086832 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P25086943 | - | - |
| Agilent Six_ChIP_02_of_03_v2 | A_68_P06098065 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10552650 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10552651 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10552653 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10552649 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10552654 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10552652 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1444240_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10552632 | - | - |
| Mouse Genome 430 2.0 Array | 1444240_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1444240_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 243961_PM_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 243961_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR0700006568.mm.1 | NM_001034115.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700006568.mm.1 | NM_001034115.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700006568.mm.1 | TC0700000800.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0700006566.mm.1 | NM_001034115.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700006566.mm.1 | NM_001034115.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700006566.mm.1 | TC0700000800.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0700006567.mm.1 | NM_001034115.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700006567.mm.1 | NM_001034115.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0700006567.mm.1 | TC0700000800.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1444240_at | - | - |
| Mouse Expression Set 430 | 1444240_PM_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1444240_PM_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1444240_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| MouseWG-6 v2 Expression BeadChip | 103800717 | - | - |
| MouseWG-6 v2 Expression BeadChip | 102120519 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 103800717 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 102120519 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_1250059 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2584798 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2574380 | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 103800717 | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 102120519 | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 102120519 | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 103800717 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2574380 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2584798 | - | - |
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