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- Gene Symbol:
-
Sema3a - Gene Name:
- sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
- Gene Aliases:
- -
- Chromosome Location:
- Chr.4: 18170375 - 18545190 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Sema3a | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_017310.1 | NP_059006.1 | 14 - 15 | 1653 | 75 | |
| XM_006235989.2 | XP_006236051.1 | 16 - 17 | 2040 | 75 | ||
| XM_006235990.2 | XP_006236052.1 | 15 - 16 | 1893 | 75 | ||
| XM_008762702.1 | XP_008760924.1 | 16 - 17 | 1902 | 75 | ||
| GenBank mRNA | X95286.1 | - | 14 - 15 | 1653 | 75 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0400002298.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
neuron migration
regulation of heart rate
apoptotic process
axon guidance
axonal fasciculation
negative regulation of epithelial cell migration
facial nerve structural organization
trigeminal nerve structural organization
nerve development
olfactory bulb development
branchiomotor neuron axon guidance
gonadotrophin-releasing hormone neuronal migration to the hypothalamus
negative regulation of axon extension
ventral trunk neural crest cell migration
dendrite morphogenesis
regulation of axon extension involved in axon guidance
negative regulation of axon extension involved in axon guidance
axon extension involved in axon guidance
negative chemotaxis
axonogenesis involved in innervation
dichotomous subdivision of terminal units involved in salivary gland branching
sympathetic ganglion development
trigeminal ganglion development
semaphorin-plexin signaling pathway
sympathetic neuron projection extension
sympathetic neuron projection guidance
neural crest cell migration involved in autonomic nervous system development
semaphorin-plexin signaling pathway involved in neuron projection guidance
semaphorin-plexin signaling pathway involved in axon guidance
neural crest cell migration involved in sympathetic nervous system development
facioacoustic ganglion development
positive regulation of male gonad development
positive regulation of neuron migration
receptor activity
semaphorin receptor binding
neuropilin binding
chemorepellent activity
neuron migration
regulation of heart rate
apoptotic process
axon guidance
axonal fasciculation
negative regulation of epithelial cell migration
facial nerve structural organization
trigeminal nerve structural organization
nerve development
olfactory bulb development
branchiomotor neuron axon guidance
gonadotrophin-releasing hormone neuronal migration to the hypothalamus
negative regulation of axon extension
ventral trunk neural crest cell migration
dendrite morphogenesis
regulation of axon extension involved in axon guidance
negative regulation of axon extension involved in axon guidance
axon extension involved in axon guidance
negative chemotaxis
axonogenesis involved in innervation
dichotomous subdivision of terminal units involved in salivary gland branching
sympathetic ganglion development
trigeminal ganglion development
semaphorin-plexin signaling pathway
sympathetic neuron projection extension
sympathetic neuron projection guidance
neural crest cell migration involved in autonomic nervous system development
semaphorin-plexin signaling pathway involved in neuron projection guidance
semaphorin-plexin signaling pathway involved in axon guidance
neural crest cell migration involved in sympathetic nervous system development
facioacoustic ganglion development
positive regulation of male gonad development
positive regulation of neuron migration
receptor activity
semaphorin receptor binding
neuropilin binding
chemorepellent activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_43_P11908 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 888056 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 402589 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 848078 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 431073 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 895429 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 206074 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 161157 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 248028 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 794270 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 960672 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 92637 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 131400 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 235957 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 912025 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 866201 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 169820 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 370948 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 750563 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 567717 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 749917 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 66232 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 18324 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 746940 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 433868 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 832422 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 120276 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 945740 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 716410 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 686258 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 835711 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 244217 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 58954 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 807624 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 47706 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 817613 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 594788 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 385963 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 273668 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 725223 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 613481 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 295962 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 495531 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 909814 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 328204 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 439488 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 843798 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 70648 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 576475 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 475759 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 144960 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 952496 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 462597 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 39096 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 343665 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 589066 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 241352 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 826840 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 373135 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 962384 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 846312 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 233311 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 173289 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 109290 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 645677 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 22366 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 658831 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 176737 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 74320 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 709774 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 831972 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 908669 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 305330 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 854430 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 364544 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 700175 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 466419 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 696553 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 330473 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 631081 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 960718 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 850942 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 498596 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 162907 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 917842 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 276915 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 495345 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 558841 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 242764 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 167265 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 36715 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 858666 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 430109 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 814012 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 508585 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 707114 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 515070 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 823965 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 60258 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 699474 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 761029 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 811417 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 285015 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 519759 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 911631 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 278415 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 381217 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 126090 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 363117 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 795019 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 738347 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 38715 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 511539 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 267999 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 789211 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 512357 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 274131 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 965926 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 373387 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 109074 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 299053 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 141038 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 579029 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 202050 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 573201 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 94828 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 22529 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 872309 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 686264 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 564956 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 55605 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 740782 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 659840 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 630808 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 73264 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 344028 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 358202 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 10666 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 402017 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 265145 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 720399 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 583231 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 917030 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 115712 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 169991 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 115733 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 57686 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 145372 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 69358 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 111476 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 119156 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 88566 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 55032 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 56100 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 130315 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 6898 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 141393 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 150550 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 21823 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 176766 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 26479 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 44637 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 137071 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 77113 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 96564 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 61762 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 57880 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P11908 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P11908 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_43_P11908 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P11908 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 60315 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 85511 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 85261 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 62151 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 62328 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 13286 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 96230 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 61750 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 13498 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 70534 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 13474 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 15701 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 23581 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 8873 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 14437 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 28168 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10860490 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860495 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860497 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860489 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860485 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860486 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860484 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860483 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860494 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860492 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860487 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860488 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860496 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860491 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860482 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860498 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860493 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10860481 | - | - |
| Rat Genome 230 2.0 Array | 1387723_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1387723_at | - | - |
| Affymetrix HT Rat Focus Array | 1387723_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1387723_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0400016338.rn.1 | TC0400002298.rn.1 | RTA TC |
| Rat Expression Set 230 | 1387723_at | - | - |
| Rat Expression Set 230 | 1387723_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10860481 | - | - |
| Rat Genome U34 Set | X95286cds_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21274306 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1375188 | - | - |
| RatRef-12 Expression BeadChip | ILMN_64332 | - | - |
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