Search
This product has been added to your favorites list. Go to
My Favorites
LOADING 
- Home
- › Search Tool › Search Results
- › Rn00441185_m1
- Gene Symbol:
-
Rxra - Gene Name:
- retinoid X receptor alpha
- Gene Aliases:
- -
- Chromosome Location:
- Chr.3: 6272560 - 6295354 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Rxra | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_012805.2 | NP_036937.2 | 797 | 75 | ||
| GenBank mRNA | AM295012.1 | - | 797 | 75 | ||
| AM295013.1 | - | 797 | 75 | |||
| AM392401.1 | - | 797 | 75 | |||
| L06482.1 | - | 964 | 75 | |||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0300000152.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Nuclear Receptor
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription from RNA polymerase II promoter
in utero embryonic development
liver development
placenta development
maternal placenta development
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
inflammatory response
midgut development
heart development
female pregnancy
embryo implantation
aging
response to nutrient
negative regulation of cell proliferation
response to selenium ion
response to organic cyclic compound
modulation by virus of host morphology or physiology
axon regeneration
regulation of myelination
response to retinoic acid
cellular response to insulin stimulus
response to vitamin A
response to vitamin D
peroxisome proliferator activated receptor signaling pathway
camera-type eye development
positive regulation of apoptotic process
steroid hormone mediated signaling pathway
response to ethanol
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of translational initiation by iron
retinoic acid receptor signaling pathway
protein homotetramerization
response to glucocorticoid
ventricular cardiac muscle tissue morphogenesis
ventricular cardiac muscle cell differentiation
cardiac muscle cell proliferation
secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development
regulation of branching involved in prostate gland morphogenesis
positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus
RNA polymerase II regulatory region sequence-specific DNA binding
DNA binding
double-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
9-cis retinoic acid receptor activity
protein binding
transcription factor binding
zinc ion binding
enzyme binding
protein domain specific binding
chromatin DNA binding
protein complex binding
vitamin D receptor binding
retinoic acid receptor binding
sequence-specific DNA binding
transcription regulatory region DNA binding
retinoic acid-responsive element binding
protein heterodimerization activity
vitamin D response element binding
negative regulation of transcription from RNA polymerase II promoter
in utero embryonic development
liver development
placenta development
maternal placenta development
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
inflammatory response
midgut development
heart development
female pregnancy
embryo implantation
aging
response to nutrient
negative regulation of cell proliferation
response to selenium ion
response to organic cyclic compound
modulation by virus of host morphology or physiology
axon regeneration
regulation of myelination
response to retinoic acid
cellular response to insulin stimulus
response to vitamin A
response to vitamin D
peroxisome proliferator activated receptor signaling pathway
camera-type eye development
positive regulation of apoptotic process
steroid hormone mediated signaling pathway
response to ethanol
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of translational initiation by iron
retinoic acid receptor signaling pathway
protein homotetramerization
response to glucocorticoid
ventricular cardiac muscle tissue morphogenesis
ventricular cardiac muscle cell differentiation
cardiac muscle cell proliferation
secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development
regulation of branching involved in prostate gland morphogenesis
positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus
RNA polymerase II regulatory region sequence-specific DNA binding
DNA binding
double-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
9-cis retinoic acid receptor activity
protein binding
transcription factor binding
zinc ion binding
enzyme binding
protein domain specific binding
chromatin DNA binding
protein complex binding
vitamin D receptor binding
retinoic acid receptor binding
sequence-specific DNA binding
transcription regulatory region DNA binding
retinoic acid-responsive element binding
protein heterodimerization activity
vitamin D response element binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P096841 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 157819 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 741883 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 814386 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 507780 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 4300 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 779457 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 900157 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 227678 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 115927 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 93480 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 464864 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 554160 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 473992 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 522739 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 948073 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 202142 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 866303 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 341285 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 185187 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 53088 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 756652 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 293780 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 728734 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 257560 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 349061 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 452852 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 193884 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 124371 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 287925 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 515366 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 31921 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 890152 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 88149 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 483285 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 668996 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 59506 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 253410 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 86548 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 408872 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 238410 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 560882 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 904690 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 715868 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 835423 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 927636 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 253094 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 816605 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 910701 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 716168 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 830940 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 341566 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 701252 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 168587 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 759655 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 713418 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 50290 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 74795 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 434 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 744282 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 320086 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 499725 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 53318 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 8618 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 28653 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 102624 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 5374 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 33383 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 43001 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 7060 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 152103 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 123091 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 117707 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P096841 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P096841 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P096841 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P172974 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 24860 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 76822 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 92149 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 18182 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 54422 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10834728 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10834730 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10834721 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10834727 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10834724 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10834726 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10834729 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10834725 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10834720 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10834723 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10834722 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10834719 | - | - |
| Rat Genome 230 2.0 Array | 1371668_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1371668_at | - | - |
| Rat Genome 230 2.0 Array | 1369101_at | - | - |
| Rat Genome 230 2.0 Array | 1369101_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1371668_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1369101_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1371668_at | - | - |
| Affymetrix HT Rat Focus Array | 1369101_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0300001381.rn.1 | TC0300000152.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0300001382.rn.1 | TC0300000152.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0300001379.rn.1 | TC0300000152.rn.1 | RTA TC |
| Rat Expression Set 230 | 1371668_PM_at | - | - |
| Rat Expression Set 230 | 1369101_PM_at | - | - |
| Rat Expression Set 230 | 1371668_at | - | - |
| Rat Expression Set 230 | 1369101_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10834719 | - | - |
| Rat Genome U34 Set | L06482_at | - | - |
| Rat Genome U34 Set | rc_AI112101_at | - | - |
| Rat Genome U34 Set | L06482_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 22051074 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1358732 | - | - |
| RatRef-12 Expression BeadChip | ILMN_68322 | - | - |
Back To Top