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- Gene Symbol:
-
Sp1 - Gene Name:
- Sp1 transcription factor
- Gene Aliases:
- -
- Chromosome Location:
- Chr.7: 144014173 - 144044635 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Sp1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_012655.2 | NP_036787.2 | 4 - 5 | 1890 | 87 | |
| GenBank mRNA | D12768.1 | - | 4 - 5 | 1906 | 87 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0700001901.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
Recommended Assay
Rattus norvegicus
Rat Hypoxia Panel
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
ossification
in utero embryonic development
trophectodermal cell differentiation
liver development
embryonic placenta development
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
megakaryocyte differentiation
lung development
enucleate erythrocyte differentiation
positive regulation by host of viral transcription
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
rhythmic process
embryonic camera-type eye morphogenesis
embryonic skeletal system development
embryonic process involved in female pregnancy
definitive hemopoiesis
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II core promoter sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
core promoter proximal region sequence-specific DNA binding
core promoter sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
RNA polymerase II repressing transcription factor binding
DNA binding
double-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
protein C-terminus binding
transcription factor binding
histone acetyltransferase binding
enhancer binding
protein homodimerization activity
histone deacetylase binding
bHLH transcription factor binding
sequence-specific DNA binding
transcription regulatory region DNA binding
metal ion binding
HMG box domain binding
ossification
in utero embryonic development
trophectodermal cell differentiation
liver development
embryonic placenta development
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
megakaryocyte differentiation
lung development
enucleate erythrocyte differentiation
positive regulation by host of viral transcription
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
rhythmic process
embryonic camera-type eye morphogenesis
embryonic skeletal system development
embryonic process involved in female pregnancy
definitive hemopoiesis
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II core promoter sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
core promoter proximal region sequence-specific DNA binding
core promoter sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
RNA polymerase II repressing transcription factor binding
DNA binding
double-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
protein C-terminus binding
transcription factor binding
histone acetyltransferase binding
enhancer binding
protein homodimerization activity
histone deacetylase binding
bHLH transcription factor binding
sequence-specific DNA binding
transcription regulatory region DNA binding
metal ion binding
HMG box domain binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P045413 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P045418 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 251894 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 320378 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 477906 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 908006 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 743585 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 106241 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 823527 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 454051 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 211254 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 193986 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 920378 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 410341 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 219907 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 898772 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 328063 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 563764 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 520284 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 151924 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 85456 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 732064 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 574838 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 904218 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 4957 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 128480 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 115393 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P045413 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P045418 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P045413 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P045418 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P045413 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P045418 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P454192 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 65492 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 94287 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 85501 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 28907 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10899548 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10899550 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10899551 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10899549 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10899553 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10899547 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10899546 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10899545 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10899552 | - | - |
| Rat Genome 230 2.0 Array | 1371880_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1392631_at | - | - |
| Rat Genome 230 2.0 Array | 1379384_at | - | - |
| Rat Genome 230 2.0 Array | 1379384_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1392180_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1392631_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1371880_at | - | - |
| Rat Genome 230 2.0 Array | 1392180_at | - | - |
| Rat Genome 230 2.0 Array | 1369247_at | - | - |
| Rat Genome 230 2.0 Array | 1369247_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1392180_at | - | - |
| Affymetrix HT Rat Focus Array | 1379384_at | - | - |
| Affymetrix HT Rat Focus Array | 1371880_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1369247_at | - | - |
| Affymetrix HT Rat Focus Array | 1371880_at | - | - |
| Affymetrix HT Rat Focus Array | 1369247_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1379384_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1392180_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0700014900.rn.1 | TC0700001901.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0700014902.rn.1 | TC0700001901.rn.1 | RTA TC |
| Rat Expression Set 230 | 1371880_PM_at | - | - |
| Rat Expression Set 230 | 1371880_at | - | - |
| Rat Expression Set 230 | 1369247_at | - | - |
| Rat Expression Set 230 | 1369247_PM_at | - | - |
| Rat Expression Set 230 | 1392180_at | - | - |
| Rat Expression Set 230 | 1392631_at | - | - |
| Rat Expression Set 230 | 1392631_PM_at | - | - |
| Rat Expression Set 230 | 1392180_PM_at | - | - |
| Rat Expression Set 230 | 1379384_at | - | - |
| Rat Expression Set 230 | 1379384_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10899552 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10899545 | - | - |
| Rat Genome U34 Set | D12768_at | - | - |
| Rat Genome U34 Set | rc_AA900254_at | - | - |
| Rat Genome U34 Set | rc_AI045226_at | - | - |
| Rat Genome U34 Set | rc_AI145910_at | - | - |
| Rat Genome U34 Set | rc_AI137591_s_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 22091746 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1373417 | - | - |
| RatRef-12 Expression BeadChip | ILMN_52507 | - | - |
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