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          • Home
          • › Search Tool
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          • › Rn00562200_m1
          See other CYP2A1 GE Assays ›
          Gene Symbol:
          Cyp2a1
          Gene Name:
          cytochrome P450, family 2, subfamily a, polypeptide 1
          Gene Aliases:
          RATCYP2A1, Shdl
          Chromosome Location:
          Chr.1: 83711223 - 83725222 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00562200_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Cyp2a1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_012692.1 NP_036824.1 3 - 4 358 63
          XM_008759105.1 XP_008757327.1 3 - 4 386 63
          XM_008759106.1 XP_008757328.1 3 - 4 386 63
          GenBank mRNA BC081848.1 - 3 - 4 348 7135880 63
          J02669.1 - 3 - 4 358 63

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0100001104.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection P450 Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Cyp2a1

          Panther Classification:

          Molecular Function -

          oxidoreductase oxygenase metabolite interconversion enzyme

          Gene Ontology Categories:

          Function(s) Process(es)

          xenobiotic metabolic process
          coumarin metabolic process
          epoxygenase P450 pathway
          heme metabolic process
          exogenous drug catabolic process
          oxidation-reduction process
          cellular response to cadmium ion
          iron ion binding
          arachidonic acid epoxygenase activity
          steroid hydroxylase activity
          oxidoreductase activity
          oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen
          oxygen binding
          heme binding
          aromatase activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P165713 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 408562 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 767426 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 456393 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 189089 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 164283 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 674827 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 64598 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 184084 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 278500 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 169227 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P165713 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P165713 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P165713 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P654578 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 701193166 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 3644 - -
          Agilent Rat cDNA Microarray (G4105A) 701193166 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10705287 - -
          Affymetrix Rat Gene 1.0 ST Array 10705288 - -
          Affymetrix Rat Gene 1.0 ST Array 10705290 - -
          Affymetrix Rat Gene 1.0 ST Array 10705294 - -
          Affymetrix Rat Gene 1.0 ST Array 10705293 - -
          Affymetrix Rat Gene 1.0 ST Array 10705292 - -
          Affymetrix Rat Gene 1.0 ST Array 10705291 - -
          Affymetrix Rat Gene 1.0 ST Array 10705289 - -
          Affymetrix Rat Gene 1.1 ST Array 10705286 - -
          Rat Genome 230 2.0 Array 1387511_PM_at - -
          Rat Genome 230 2.0 Array 1387511_at - -
          Rat Genome 230 2.0 Array 1369275_s_at - -
          Rat Genome 230 2.0 Array 1369275_PM_s_at - -
          Affymetrix HT Rat Focus Array 1387511_PM_at - -
          Affymetrix HT Rat Focus Array 1369275_PM_s_at - -
          Affymetrix HT Rat Focus Array 1369275_s_at - -
          Affymetrix HT Rat Focus Array 1387511_at - -
          Affymetrix Rat Clariom S Assay PSR0100008061.rn.1 TC0100001104.rn.1 RTA TC
          Rat Expression Set 230 1387511_PM_at - -
          Rat Expression Set 230 1387511_at - -
          Rat Expression Set 230 1369275_s_at - -
          Rat Expression Set 230 1369275_PM_s_at - -
          Affymetrix Rat Gene 1.0 ST Array 10705286 - -
          Rat Genome U34 Set M33312cds_s_at - -
          Rat Genome U34 Set J02669_s_at - -
          Rat Genome U34 Set M33312cds_s_at - -
          Rat Genome U34 Set J02669_s_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21631081 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1361745 - -
          RatRef-12 Expression BeadChip ILMN_56813 - -

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