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          • Home
          • › Search Tool
          • › Search Results
          • › Rn00564672_m1
          See other SHOX2 GE Assays ›
          Gene Symbol:
          Shox2
          Gene Name:
          short stature homeobox 2
          Gene Aliases:
          -
          Chromosome Location:
          Chr.2: 164118175 - 164126783 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00564672_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 284.00
          Your Price
          Online offer: 266.65
          266.65
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Shox2
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_013028.1 NP_037160.1 2 - 3 287 97
          GenBank mRNA AJ002258.1 - 2 - 3 308 97
          AJ002259.1 - 2 - 3 287 97
          AJ002260.1 - 1 - 2 260 97

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0200003829.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Shox2

          Panther Classification:

          Molecular Function -

          homeodomain transcription factor

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          osteoblast differentiation
          positive regulation of mesenchymal cell proliferation
          chondrocyte differentiation
          chondrocyte development
          heart valve development
          cardiac atrium morphogenesis
          regulation of transcription, DNA-templated
          multicellular organism development
          embryonic limb morphogenesis
          regulation of chondrocyte differentiation
          embryonic forelimb morphogenesis
          positive regulation of smoothened signaling pathway
          positive regulation of transcription from RNA polymerase II promoter
          embryonic digestive tract morphogenesis
          embryonic morphogenesis
          positive regulation of skeletal muscle fiber development
          positive regulation of axonogenesis
          embryonic skeletal joint morphogenesis
          cartilage development involved in endochondral bone morphogenesis
          muscle tissue morphogenesis
          regulation of branching morphogenesis of a nerve
          sequence-specific DNA binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P412265 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P418245 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 630844 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 727283 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 739058 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 716230 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 62275 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 52931 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 114839 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 162860 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P418245 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P412265 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P418245 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P412265 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P418245 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P412265 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P418245 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P412265 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 53145 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10823544 - -
          Affymetrix Rat Gene 1.0 ST Array 10823543 - -
          Affymetrix Rat Gene 1.0 ST Array 10823540 - -
          Affymetrix Rat Gene 1.0 ST Array 10823542 - -
          Affymetrix Rat Gene 1.0 ST Array 10823546 - -
          Affymetrix Rat Gene 1.0 ST Array 10823539 - -
          Affymetrix Rat Gene 1.0 ST Array 10823541 - -
          Affymetrix Rat Gene 1.1 ST Array 10823538 - -
          Rat Genome 230 2.0 Array 1387349_at - -
          Rat Genome 230 2.0 Array 1368825_at - -
          Rat Genome 230 2.0 Array 1375389_PM_at - -
          Rat Genome 230 2.0 Array 1375389_at - -
          Rat Genome 230 2.0 Array 1387349_PM_at - -
          Rat Genome 230 2.0 Array 1368825_PM_at - -
          Affymetrix HT Rat Focus Array 1375389_PM_at - -
          Affymetrix HT Rat Focus Array 1368825_PM_at - -
          Affymetrix HT Rat Focus Array 1387349_PM_at - -
          Affymetrix HT Rat Focus Array 1375389_at - -
          Affymetrix HT Rat Focus Array 1368825_at - -
          Affymetrix HT Rat Focus Array 1387349_at - -
          Affymetrix Rat Clariom S Assay PSR0200025674.rn.1 TC0200003829.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0200025675.rn.1 TC0200003829.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0200025676.rn.1 TC0200003829.rn.1 RTA TC
          Rat Expression Set 230 1368825_at - -
          Rat Expression Set 230 1387349_at - -
          Rat Expression Set 230 1387349_PM_at - -
          Rat Expression Set 230 1368825_PM_at - -
          Rat Expression Set 230 1375389_PM_at - -
          Rat Expression Set 230 1375389_at - -
          Affymetrix Rat Gene 1.0 ST Array 10823538 - -
          Rat Genome U34 Set AJ002259_at - -
          Rat Genome U34 Set AJ002259_g_at - -
          Rat Genome U34 Set rc_AI103639_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22398723 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1360521 - -
          RatRef-12 Expression BeadChip ILMN_59659 - -

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          Host server : magellan-search-blue-64dd947b88-fbg7s:80/100.66.79.246:80.
          git-commit: 0f46c0ba67a87c24f5ac662a3edafcaba07cd08c
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