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- Gene Symbol:
-
Stxbp1 - Gene Name:
- syntaxin binding protein 1
- Gene Aliases:
- ANC18HA, Munc18-1, NSEC1A, Sec1, Unc18-1, n-sec1, nSec1, rbSec1, rbSec1A, rbSec1B
- Chromosome Location:
- Chr.3: 11823779 - 11885487 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Stxbp1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_013038.3 | NP_037170.1 | 6 - 7 | 541 | 75 | |
| XM_006233939.2 | XP_006234001.1 | 6 - 7 | 611 | 75 | ||
| GenBank mRNA | BC088850.1 | - | 6 - 7 | 541 | 7315868 | 75 |
| L26264.1 | - | 6 - 7 | 520 | 75 | ||
| U06069.1 | - | 6 - 7 | 452 | 75 | ||
| U21116.1 | - | 6 - 7 | 435 | 75 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0300002882.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
platelet degranulation
exocytosis
vesicle docking involved in exocytosis
neurotransmitter secretion
neuromuscular synaptic transmission
axon target recognition
regulation of synaptic vesicle priming
protein transport
synaptic vesicle maturation
negative regulation of synaptic transmission, GABAergic
negative regulation of neuron apoptotic process
positive regulation of exocytosis
positive regulation of calcium ion-dependent exocytosis
protein stabilization
long term synaptic depression
platelet aggregation
protein localization to plasma membrane
SNARE binding
protein binding
syntaxin-1 binding
protein kinase binding
protein domain specific binding
syntaxin binding
identical protein binding
poly(A) RNA binding
protein N-terminus binding
platelet degranulation
exocytosis
vesicle docking involved in exocytosis
neurotransmitter secretion
neuromuscular synaptic transmission
axon target recognition
regulation of synaptic vesicle priming
protein transport
synaptic vesicle maturation
negative regulation of synaptic transmission, GABAergic
negative regulation of neuron apoptotic process
positive regulation of exocytosis
positive regulation of calcium ion-dependent exocytosis
protein stabilization
long term synaptic depression
platelet aggregation
protein localization to plasma membrane
SNARE binding
protein binding
syntaxin-1 binding
protein kinase binding
protein domain specific binding
syntaxin binding
identical protein binding
poly(A) RNA binding
protein N-terminus binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P472942 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P079875 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 772587 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 37493 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 382916 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 804113 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 160711 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 579665 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 211339 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 345836 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 568152 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 964147 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 94884 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 652360 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 432069 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 174493 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 105435 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 647673 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 349780 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 414746 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 685066 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 116431 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 59190 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 611119 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 369843 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 304929 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 167812 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 901070 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 453128 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 44691 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 813966 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 273633 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 25028 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 772872 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 54599 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 484474 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 71627 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 96052 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 371647 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 309006 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 680041 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 315036 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 148379 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 67741 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 166447 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 129512 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 3437 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 81458 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 31237 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P472942 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P079875 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P472942 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P079875 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P472942 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P079875 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P472942 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 6999 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 97395 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 79041 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 64747 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 3812 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 86992 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 8261 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10844408 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844397 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844410 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844404 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844393 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844409 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844400 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844412 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844411 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844407 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844406 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844405 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844402 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844398 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844391 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844403 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844396 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844392 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844399 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844395 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844401 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10844390 | - | - |
| Rat Genome 230 2.0 Array | 1370518_PM_a_at | - | - |
| Rat Genome 230 2.0 Array | 1370519_at | - | - |
| Rat Genome 230 2.0 Array | 1370518_a_at | - | - |
| Rat Genome 230 2.0 Array | 1370840_at | - | - |
| Rat Genome 230 2.0 Array | 1370519_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1398330_at | - | - |
| Rat Genome 230 2.0 Array | 1370840_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1398330_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1370519_at | - | - |
| Affymetrix HT Rat Focus Array | 1370518_a_at | - | - |
| Affymetrix HT Rat Focus Array | 1398330_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1370519_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1398330_at | - | - |
| Affymetrix HT Rat Focus Array | 1370840_at | - | - |
| Affymetrix HT Rat Focus Array | 1370518_PM_a_at | - | - |
| Affymetrix HT Rat Focus Array | 1370840_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0300022316.rn.1 | TC0300002882.rn.1 | RTA TC |
| Rat Expression Set 230 | 1370519_PM_at | - | - |
| Rat Expression Set 230 | 1398330_at | - | - |
| Rat Expression Set 230 | 1370840_PM_at | - | - |
| Rat Expression Set 230 | 1398330_PM_at | - | - |
| Rat Expression Set 230 | 1370518_PM_a_at | - | - |
| Rat Expression Set 230 | 1370519_at | - | - |
| Rat Expression Set 230 | 1370840_at | - | - |
| Rat Expression Set 230 | 1370518_a_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10844390 | - | - |
| Rat Genome U34 Set | rc_AI102079_at | - | - |
| Rat Genome U34 Set | rc_AI102079_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21471075 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1359184 | - | - |
| RatRef-12 Expression BeadChip | ILMN_51698 | - | - |
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