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          • Home
          • › Search Tool
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          • › Rn00565598_m1
          See other HMGCR GE Assays ›
          Gene Symbol:
          Hmgcr
          Gene Name:
          3-hydroxy-3-methylglutaryl-CoA reductase
          Gene Aliases:
          3H3M
          Chromosome Location:
          Chr.2: 27480224 - 27500654 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00565598_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Hmgcr
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_013134.2 NP_037266.2 6 - 7 609 71
          XM_006231826.2 XP_006231888.1 6 - 7 1017 71
          GenBank mRNA BC064654.1 - 6 - 7 609 5600023 71

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0200002686.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Hmgcr

          Panther Classification:

          Molecular Function -

          oxidoreductase reductase metabolite interconversion enzyme

          Gene Ontology Categories:

          Function(s) Process(es)

          cholesterol biosynthetic process
          ubiquinone metabolic process
          aging
          response to nutrient
          positive regulation of cell proliferation
          isoprenoid biosynthetic process
          visual learning
          farnesyl diphosphate biosynthetic process, mevalonate pathway
          negative regulation of striated muscle cell apoptotic process
          positive regulation of cardiac muscle cell apoptotic process
          coenzyme A metabolic process
          positive regulation of stress-activated MAPK cascade
          negative regulation of apoptotic process
          negative regulation of MAP kinase activity
          myoblast differentiation
          response to ethanol
          negative regulation of vasodilation
          positive regulation of skeletal muscle tissue development
          positive regulation of smooth muscle cell proliferation
          protein tetramerization
          oxidation-reduction process
          negative regulation of wound healing
          negative regulation of insulin secretion involved in cellular response to glucose stimulus
          positive regulation of ERK1 and ERK2 cascade
          hydroxymethylglutaryl-CoA reductase (NADPH) activity
          hydroxymethylglutaryl-CoA reductase activity
          protein homodimerization activity
          coenzyme binding
          protein phosphatase 2A binding
          NADPH binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P315661 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 816631 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 887206 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 584475 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 859861 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 822803 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 347946 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 796781 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 966200 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 148485 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 149093 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 783798 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 168099 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 489903 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 490760 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 755913 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 319322 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 555793 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 402353 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 36929 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 98711 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 175969 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P315661 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P315661 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P315661 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P315661 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P11729 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 30783 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 80240 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 84970 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10820681 - -
          Affymetrix Rat Gene 1.0 ST Array 10820685 - -
          Affymetrix Rat Gene 1.0 ST Array 10820671 - -
          Affymetrix Rat Gene 1.0 ST Array 10820678 - -
          Affymetrix Rat Gene 1.0 ST Array 10820675 - -
          Affymetrix Rat Gene 1.0 ST Array 10820669 - -
          Affymetrix Rat Gene 1.0 ST Array 10820667 - -
          Affymetrix Rat Gene 1.0 ST Array 10820679 - -
          Affymetrix Rat Gene 1.0 ST Array 10820668 - -
          Affymetrix Rat Gene 1.0 ST Array 10820684 - -
          Affymetrix Rat Gene 1.0 ST Array 10820676 - -
          Affymetrix Rat Gene 1.0 ST Array 10820670 - -
          Affymetrix Rat Gene 1.0 ST Array 10820674 - -
          Affymetrix Rat Gene 1.0 ST Array 10820673 - -
          Affymetrix Rat Gene 1.0 ST Array 10820680 - -
          Affymetrix Rat Gene 1.0 ST Array 10820672 - -
          Affymetrix Rat Gene 1.0 ST Array 10820683 - -
          Affymetrix Rat Gene 1.0 ST Array 10820677 - -
          Affymetrix Rat Gene 1.0 ST Array 10820682 - -
          Affymetrix Rat Gene 1.1 ST Array 10820666 - -
          Rat Genome 230 2.0 Array 1387848_PM_at - -
          Rat Genome 230 2.0 Array 1375852_at - -
          Rat Genome 230 2.0 Array 1375852_PM_at - -
          Rat Genome 230 2.0 Array 1387848_at - -
          Affymetrix HT Rat Focus Array 1375852_PM_at - -
          Affymetrix HT Rat Focus Array 1387848_PM_at - -
          Affymetrix HT Rat Focus Array 1387848_at - -
          Affymetrix HT Rat Focus Array 1375852_at - -
          Affymetrix Rat Clariom S Assay PSR0200018788.rn.1 TC0200002686.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0200018789.rn.1 TC0200002686.rn.1 RTA TC
          Rat Expression Set 230 1387848_PM_at - -
          Rat Expression Set 230 1387848_at - -
          Rat Expression Set 230 1375852_PM_at - -
          Rat Expression Set 230 1375852_at - -
          Affymetrix Rat Gene 1.0 ST Array 10820666 - -
          Rat Genome U34 Set X55286_g_at - -
          Rat Genome U34 Set M29249cds_at - -
          Rat Genome U34 Set X55286_at - -
          Rat Genome U34 Set rc_AA924210_at - -
          Rat Genome U34 Set X55286_g_at - -
          Rat Genome U34 Set X55286_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21771883 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1351282 - -
          RatRef-12 Expression BeadChip ILMN_58724 - -

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