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- Gene Symbol:
-
Acan - Gene Name:
- aggrecan
- Gene Aliases:
- Agc, Agc1
- Chromosome Location:
- Chr.1: 140762758 - 140824441 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic MapAssay Details
| Gene Symbol: Acan | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_022190.1 | NP_071526.1 | 2 - 3 | 454 | 74 | |
| GenBank mRNA | J03485.1 | - | 2 - 3 | 454 | 74 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0100001823.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
cartilage condensation
ossification
chondrocyte development
cell adhesion
central nervous system development
response to radiation
response to mechanical stimulus
response to gravity
response to glucose
multicellular organism aging
response to acidic pH
response to organic cyclic compound
spinal cord development
proteoglycan biosynthetic process
collagen fibril organization
negative regulation of cell migration
response to drug
chondroblast differentiation
cellular response to growth factor stimulus
calcium ion binding
hyaluronic acid binding
carbohydrate binding
cartilage condensation
ossification
chondrocyte development
cell adhesion
central nervous system development
response to radiation
response to mechanical stimulus
response to gravity
response to glucose
multicellular organism aging
response to acidic pH
response to organic cyclic compound
spinal cord development
proteoglycan biosynthetic process
collagen fibril organization
negative regulation of cell migration
response to drug
chondroblast differentiation
cellular response to growth factor stimulus
calcium ion binding
hyaluronic acid binding
carbohydrate binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_43_P12154 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 908452 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 781287 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 450005 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 672955 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 50382 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 307778 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 320530 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 117189 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 306185 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 56618 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 613051 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 470910 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 870767 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 247744 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 119677 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 896115 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 795910 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 466398 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 871328 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 46046 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 368432 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 768599 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 843984 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 189721 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 464074 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 941012 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 123827 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 312873 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 688814 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 266397 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 622101 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 337817 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 908837 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 566993 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 800091 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 784646 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 164233 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 577196 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 520846 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 125642 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 472733 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 758512 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 489904 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 271459 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 774512 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 147680 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 55941 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 164072 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 75058 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 29949 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 52233 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 81957 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 9218 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P12154 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P12154 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_43_P12154 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P12154 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 43204 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 49678 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 74604 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10708044 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708036 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708028 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708043 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708040 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708026 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708025 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708035 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708049 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708038 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708050 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708027 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708030 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708022 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708048 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708046 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708042 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708031 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708023 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708034 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708039 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708041 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708047 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708029 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708024 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708032 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708033 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708045 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708052 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10708021 | - | - |
| Rat Genome 230 2.0 Array | 1387355_at | - | - |
| Rat Genome 230 2.0 Array | 1368836_a_at | - | - |
| Rat Genome 230 2.0 Array | 1387355_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1368836_PM_a_at | - | - |
| Affymetrix HT Rat Focus Array | 1387355_at | - | - |
| Affymetrix HT Rat Focus Array | 1368836_PM_a_at | - | - |
| Affymetrix HT Rat Focus Array | 1387355_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1368836_a_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0100014286.rn.1 | TC0100001823.rn.1 | RTA TC |
| Rat Expression Set 230 | 1387355_at | - | - |
| Rat Expression Set 230 | 1387355_PM_at | - | - |
| Rat Expression Set 230 | 1368836_PM_a_at | - | - |
| Rat Expression Set 230 | 1368836_a_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10708021 | - | - |
| Rat Genome U34 Set | rc_AA899552_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21332021 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1367163 | - | - |
| RatRef-12 Expression BeadChip | ILMN_57514 | - | - |
Back To TopCitations (1)
Regulation of Sox9 activity by crosstalk with nuclear factor-kappaB and retinoic acid receptors.
- Authors
- Rockel JS, Kudirka JC, Guzi AJ, Bernier SM
- Journal
- Arthritis Res Ther - Page No R3 (Tue Jan 01 00:00:00 EST 2008)
- Volume (Year)
- 10 (2008)
- Product Usage
- -
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