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          • Home
          • › Search Tool
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          • › Rn00575030_m1
          See other CTSB GE Assays ›
          Gene Symbol:
          Ctsb
          Gene Name:
          cathepsin B
          Gene Aliases:
          -
          Chromosome Location:
          Chr.15: 46316741 - 46337613 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00575030_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Ctsb
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_022597.2 NP_072119.2 5 - 6 582 59
          GenBank mRNA BC072490.1 - 5 - 6 545 7097817 59
          FQ212977.1 - 1 - 2 93 59
          M11305.1 - 2 - 3 246 59
          X82396.1 - 5 - 6 511 59

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1500000689.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Protease Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Ctsb

          Panther Classification:

          Molecular Function -

          cysteine protease

          Gene Ontology Categories:

          Function(s) Process(es)

          proteolysis
          autophagy
          spermatogenesis
          skeletal muscle tissue development
          response to wounding
          response to mechanical stimulus
          response to glucose
          response to organic cyclic compound
          response to amine
          collagen catabolic process
          epithelial cell differentiation
          response to cytokine
          response to peptide hormone
          response to ethanol
          decidualization
          regulation of catalytic activity
          proteolysis involved in cellular protein catabolic process
          negative regulation of cell death
          response to interleukin-4
          cellular response to mechanical stimulus
          cellular response to thyroid hormone stimulus
          endopeptidase activity
          cysteine-type endopeptidase activity
          protein binding
          collagen binding
          peptidase activity
          cysteine-type peptidase activity
          kininogen binding
          protein complex binding
          peptide binding
          proteoglycan binding
          protein self-association

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P15292 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 692897 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 466822 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 616658 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 555100 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 13648 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 839807 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 646047 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 45276 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 316853 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 400001 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 337052 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 385095 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 506536 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 236941 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 249849 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 754621 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 48811 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 167703 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 139095 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P15292 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P15292 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P15292 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P15292 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 700304522 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 6124 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 102218 - -
          Agilent Rat cDNA Microarray (G4105A) 700304522 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10780995 - -
          Affymetrix Rat Gene 1.0 ST Array 10780991 - -
          Affymetrix Rat Gene 1.0 ST Array 10781000 - -
          Affymetrix Rat Gene 1.0 ST Array 10780999 - -
          Affymetrix Rat Gene 1.0 ST Array 10780992 - -
          Affymetrix Rat Gene 1.0 ST Array 10780998 - -
          Affymetrix Rat Gene 1.0 ST Array 10780993 - -
          Affymetrix Rat Gene 1.0 ST Array 10780997 - -
          Affymetrix Rat Gene 1.0 ST Array 10780996 - -
          Affymetrix Rat Gene 1.0 ST Array 10780994 - -
          Affymetrix Rat Gene 1.1 ST Array 10780990 - -
          Rat Genome 230 2.0 Array 1395950_at - -
          Rat Genome 230 2.0 Array 1367646_at - -
          Rat Genome 230 2.0 Array 1367646_PM_at - -
          Rat Genome 230 2.0 Array 1395950_PM_at - -
          Affymetrix HT Rat Focus Array 1367646_PM_at - -
          Affymetrix HT Rat Focus Array 1367646_at - -
          Affymetrix Rat Clariom S Assay PSR1500004824.rn.1 TC1500000689.rn.1 RTA TC
          Rat Expression Set 230 1367646_PM_at - -
          Rat Expression Set 230 1367646_at - -
          Affymetrix Rat Gene 1.0 ST Array 10780990 - -
          Rat Genome U34 Set X82396_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22415929 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1376513 - -

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