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          • Home
          • › Search Tool
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          • › Rn00579590_m1
          See other CCL5 GE Assays ›
          Gene Symbol:
          Ccl5
          Gene Name:
          chemokine (C-C motif) ligand 5
          Gene Aliases:
          Rantes, Scya5
          Chromosome Location:
          Chr.10: 70739764 - 70744303 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00579590_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Ccl5
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_031116.3 NP_112378.2 2 - 3 228 80
          GenBank mRNA BC058138.1 - 2 - 3 244 6921268 80
          EF121972.1 - 186 80
          EF122007.1 - 2 - 3 186 80
          U06436.1 - 2 - 3 186 80

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1000003426.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Rattus norvegicus Rat Chemokine Panel 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Ccl5

          Panther Classification:

          Molecular Function -

          cytokine intercellular signal molecule

          Gene Ontology Categories:

          Function(s) Process(es)

          MAPK cascade
          chronic inflammatory response
          protein phosphorylation
          calcium ion transport
          cellular calcium ion homeostasis
          exocytosis
          inflammatory response
          leukocyte cell-cell adhesion
          G-protein coupled receptor signaling pathway
          cell-cell signaling
          aging
          response to virus
          response to bacterium
          response to toxic substance
          response to salt stress
          positive regulation of gene expression
          positive regulation of macrophage chemotaxis
          positive regulation of T cell chemotaxis
          positive regulation of phosphatidylinositol 3-kinase signaling
          response to organic cyclic compound
          response to activity
          positive regulation of smooth muscle cell migration
          dibenzo-p-dioxin metabolic process
          positive regulation of cell migration
          pseudopodium assembly
          positive regulation of cellular biosynthetic process
          activation of phospholipase D activity
          positive regulation of fever generation
          lipopolysaccharide-mediated signaling pathway
          response to nutrient levels
          response to lipopolysaccharide
          response to insulin
          positive regulation of cell-cell adhesion mediated by integrin
          response to cytokine
          positive regulation of homotypic cell-cell adhesion
          response to interferon-gamma
          response to tumor necrosis factor
          T-helper 1 cell diapedesis
          positive regulation of T cell proliferation
          neutrophil activation
          positive regulation of phosphorylation
          response to drug
          positive regulation of tyrosine phosphorylation of STAT protein
          protein kinase B signaling
          cellular protein complex assembly
          response to estrogen
          negative regulation by host of viral transcription
          cellular response to fibroblast growth factor stimulus
          negative regulation of viral genome replication
          positive regulation of neuron differentiation
          positive regulation of osteoclast differentiation
          negative regulation of G-protein coupled receptor protein signaling pathway
          positive regulation of angiogenesis
          positive regulation of cell adhesion
          eosinophil chemotaxis
          lymphocyte chemotaxis
          positive regulation of smooth muscle cell proliferation
          positive regulation of epithelial cell proliferation
          regulation of insulin secretion
          regulation of T cell activation
          positive chemotaxis
          protein tetramerization
          response to glucocorticoid
          positive regulation of calcium ion transport
          negative regulation of cell death
          positive regulation of mast cell chemotaxis
          positive regulation of protein tyrosine kinase activity
          chemokine-mediated signaling pathway
          negative regulation of chemokine-mediated signaling pathway
          negative regulation of T cell apoptotic process
          positive regulation of T cell apoptotic process
          response to cholesterol
          cellular response to lipopolysaccharide
          cellular response to amino acid stimulus
          cellular response to vitamin K
          cellular response to morphine
          cellular response to cytokine stimulus
          cellular response to interferon-gamma
          cellular response to interleukin-1
          cellular response to tumor necrosis factor
          cellular response to ethanol
          cellular response to lipid
          cellular response to high density lipoprotein particle stimulus
          cellular response to organic cyclic compound
          cellular response to alkyl hydroperoxide
          cellular response to transforming growth factor beta stimulus
          positive regulation of monocyte chemotaxis
          regulation of neuron death
          negative regulation of neuron death
          negative regulation of macrophage apoptotic process
          positive regulation of T cell migration
          positive regulation of natural killer cell chemotaxis
          phosphatidylinositol phospholipase C activity
          protein kinase activity
          chemokine activity
          heparin binding
          phospholipase activator activity
          receptor signaling protein tyrosine kinase activator activity
          CCR1 chemokine receptor binding
          CCR5 chemokine receptor binding
          chemoattractant activity
          chemokine receptor binding
          protein homodimerization activity
          protein self-association
          chemokine receptor antagonist activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P115060 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 911223 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 906592 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 339497 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 531204 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 335139 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 683941 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 803330 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 234072 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 243966 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 210644 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 374996 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 629269 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 274133 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 278510 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 330482 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 120493 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 571288 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 465889 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 107559 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P115060 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P115060 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P115060 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P304323 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 700531281 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 16519 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 95838 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 54284 - -
          Agilent Rat cDNA Microarray (G4105A) 700531281 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10745635 - -
          Affymetrix Rat Gene 1.0 ST Array 10745632 - -
          Affymetrix Rat Gene 1.0 ST Array 10745636 - -
          Affymetrix Rat Gene 1.0 ST Array 10745633 - -
          Affymetrix Rat Gene 1.0 ST Array 10745634 - -
          Affymetrix Rat Gene 1.1 ST Array 10745631 - -
          Rat Genome 230 2.0 Array 1369983_PM_at - -
          Rat Genome 230 2.0 Array 1369983_at - -
          Affymetrix HT Rat Focus Array 1369983_PM_at - -
          Affymetrix HT Rat Focus Array 1369983_at - -
          Affymetrix Rat Clariom S Assay PSR1000030576.rn.1 TC1000003426.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1000030575.rn.1 TC1000003426.rn.1 RTA TC
          Rat Expression Set 230 1369983_at - -
          Rat Expression Set 230 1369983_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10745631 - -
          Rat Genome U34 Set rc_AI009658_at - -
          Rat Genome U34 Set rc_AI009658_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 20896278 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1355610 - -
          RatRef-12 Expression BeadChip ILMN_53812 - -

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