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          • › Rn00581178_m1
          See other NR1H2 GE Assays ›
          Gene Symbol:
          Nr1h2
          Gene Name:
          nuclear receptor subfamily 1, group H, member 2
          Gene Aliases:
          OR-1
          Chromosome Location:
          Chr.1: 100554577 - 100559896 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00581178_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Nr1h2
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_031626.1 NP_113814.1 8 - 9 1232 75
          GenBank mRNA BC157812.1 - 8 - 9 1211 75
          U14533.1 - 8 - 9 1232 75
          U20389.1 - 8 - 9 1176 75

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0100005355.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 Nuclear Receptor Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Nr1h2

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          regulation of transcription from RNA polymerase II promoter
          transcription from RNA polymerase II promoter
          positive regulation of gene expression
          negative regulation of gene expression
          positive regulation of triglyceride biosynthetic process
          positive regulation of cholesterol efflux
          positive regulation of lipid storage
          negative regulation of cholesterol storage
          intracellular receptor signaling pathway
          positive regulation of cellular protein metabolic process
          negative regulation of lipid transport
          positive regulation of cholesterol transport
          cholesterol homeostasis
          steroid hormone mediated signaling pathway
          cellular lipid metabolic process
          positive regulation of fatty acid biosynthetic process
          negative regulation of proteolysis
          negative regulation of transcription, DNA-templated
          positive regulation of transcription from RNA polymerase II promoter
          retinoic acid receptor signaling pathway
          negative regulation of pinocytosis
          positive regulation of lipoprotein lipase activity
          lipid homeostasis
          positive regulation of high-density lipoprotein particle assembly
          positive regulation of pancreatic juice secretion
          positive regulation of secretion of lysosomal enzymes
          regulation of cholesterol homeostasis
          RNA polymerase II core promoter proximal region sequence-specific DNA binding
          transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
          RNA polymerase II transcription factor activity, sequence-specific transcription regulatory region DNA binding
          DNA binding
          transcription factor activity, sequence-specific DNA binding
          steroid hormone receptor activity
          RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
          protein binding
          zinc ion binding
          apolipoprotein A-I receptor binding
          sequence-specific DNA binding
          retinoid X receptor binding
          ATPase binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P474165 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 138744 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 618367 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 520565 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P474165 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P474165 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P474165 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P474165 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10721427 - -
          Affymetrix Rat Gene 1.0 ST Array 10721423 - -
          Affymetrix Rat Gene 1.0 ST Array 10721426 - -
          Affymetrix Rat Gene 1.0 ST Array 10721431 - -
          Affymetrix Rat Gene 1.0 ST Array 10721432 - -
          Affymetrix Rat Gene 1.0 ST Array 10721422 - -
          Affymetrix Rat Gene 1.0 ST Array 10721428 - -
          Affymetrix Rat Gene 1.0 ST Array 10721425 - -
          Affymetrix Rat Gene 1.0 ST Array 10721430 - -
          Affymetrix Rat Gene 1.0 ST Array 10721424 - -
          Affymetrix Rat Gene 1.0 ST Array 10721429 - -
          Affymetrix Rat Gene 1.1 ST Array 10721421 - -
          Rat Genome 230 2.0 Array 1389854_at - -
          Rat Genome 230 2.0 Array 1389854_PM_at - -
          Rat Genome 230 2.0 Array 1370208_at - -
          Rat Genome 230 2.0 Array 1370208_PM_at - -
          Affymetrix HT Rat Focus Array 1370208_PM_at - -
          Affymetrix HT Rat Focus Array 1370208_at - -
          Affymetrix HT Rat Focus Array 1389854_at - -
          Affymetrix HT Rat Focus Array 1389854_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0100043230.rn.1 TC0100005355.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0100043233.rn.1 TC0100005355.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0100043234.rn.1 TC0100005355.rn.1 RTA TC
          Rat Expression Set 230 1389854_at - -
          Rat Expression Set 230 1389854_PM_at - -
          Rat Expression Set 230 1370208_PM_at - -
          Rat Expression Set 230 1370208_at - -
          Affymetrix Rat Gene 1.0 ST Array 10721421 - -
          Rat Genome U34 Set rc_AA956855_at - -
          Rat Genome U34 Set U14533_at - -
          Rat Genome U34 Set U14533_at - -
          Rat Genome U34 Set rc_AA956855_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21758086 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1367664 - -
          RatRef-12 Expression BeadChip ILMN_64410 - -

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