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- Gene Symbol:
-
Hmga2 - Gene Name:
- high mobility group AT-hook 2
- Gene Aliases:
- Hmgic
- Chromosome Location:
- Chr.7: 65159944 - 65275408 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Hmga2 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_032070.1 | NP_114459.1 | 1 - 2 | 520 | 82 | |
| GenBank mRNA | U89695.1 | - | 1 - 2 | 520 | 82 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0700002843.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription from RNA polymerase II promoter
DNA catabolic process, endonucleolytic
epithelial to mesenchymal transition
chondrocyte differentiation
mesodermal-endodermal cell signaling
base-excision repair
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
mitotic G2 DNA damage checkpoint
signal transduction
spermatogenesis
cell proliferation
positive regulation of cell proliferation
male gonad development
response to virus
regulation of cell cycle process
positive regulation of gene expression
cell proliferation in forebrain
pituitary gland development
adrenal gland development
chromosome breakage
heterochromatin assembly
negative regulation of intracellular steroid hormone receptor signaling pathway
somatic stem cell population maintenance
histone H2A-S139 phosphorylation
senescence-associated heterochromatin focus assembly
endodermal cell differentiation
chondrocyte proliferation
positive regulation of multicellular organism growth
DNA damage response, detection of DNA damage
positive regulation of apoptotic process
negative regulation of apoptotic process
negative regulation of DNA binding
negative regulation by host of viral transcription
fat cell differentiation
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
negative regulation of JAK-STAT cascade
mesodermal cell differentiation
negative regulation of astrocyte differentiation
mesenchymal cell differentiation
stem cell differentiation
positive regulation of sequence-specific DNA binding transcription factor activity
regulation of growth hormone secretion
adipose tissue development
fat pad development
positive regulation of cell cycle arrest
regulation of peptide hormone secretion
oncogene-induced cell senescence
regulation of stem cell population maintenance
positive regulation of stem cell proliferation
positive regulation of transcription regulatory region DNA binding
positive regulation of cellular response to X-ray
positive regulation of cellular senescence
positive regulation of response to DNA damage stimulus
negative regulation of double-strand break repair via nonhomologous end joining
regulation of cellular response to drug
regulatory region DNA binding
transcription factor activity, transcription factor binding
core promoter binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
AT DNA binding
transcription factor activity, sequence-specific DNA binding
DNA-(apurinic or apyrimidinic site) lyase activity
DNA-dependent protein kinase activity
transcription factor binding
DNA binding, bending
enzyme binding
nucleosomal DNA binding
cAMP response element binding
MH2 domain binding
MH1 domain binding
SMAD binding
5'-deoxyribose-5-phosphate lyase activity
C2H2 zinc finger domain binding
negative regulation of transcription from RNA polymerase II promoter
DNA catabolic process, endonucleolytic
epithelial to mesenchymal transition
chondrocyte differentiation
mesodermal-endodermal cell signaling
base-excision repair
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
mitotic G2 DNA damage checkpoint
signal transduction
spermatogenesis
cell proliferation
positive regulation of cell proliferation
male gonad development
response to virus
regulation of cell cycle process
positive regulation of gene expression
cell proliferation in forebrain
pituitary gland development
adrenal gland development
chromosome breakage
heterochromatin assembly
negative regulation of intracellular steroid hormone receptor signaling pathway
somatic stem cell population maintenance
histone H2A-S139 phosphorylation
senescence-associated heterochromatin focus assembly
endodermal cell differentiation
chondrocyte proliferation
positive regulation of multicellular organism growth
DNA damage response, detection of DNA damage
positive regulation of apoptotic process
negative regulation of apoptotic process
negative regulation of DNA binding
negative regulation by host of viral transcription
fat cell differentiation
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
negative regulation of JAK-STAT cascade
mesodermal cell differentiation
negative regulation of astrocyte differentiation
mesenchymal cell differentiation
stem cell differentiation
positive regulation of sequence-specific DNA binding transcription factor activity
regulation of growth hormone secretion
adipose tissue development
fat pad development
positive regulation of cell cycle arrest
regulation of peptide hormone secretion
oncogene-induced cell senescence
regulation of stem cell population maintenance
positive regulation of stem cell proliferation
positive regulation of transcription regulatory region DNA binding
positive regulation of cellular response to X-ray
positive regulation of cellular senescence
positive regulation of response to DNA damage stimulus
negative regulation of double-strand break repair via nonhomologous end joining
regulation of cellular response to drug
regulatory region DNA binding
transcription factor activity, transcription factor binding
core promoter binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
AT DNA binding
transcription factor activity, sequence-specific DNA binding
DNA-(apurinic or apyrimidinic site) lyase activity
DNA-dependent protein kinase activity
transcription factor binding
DNA binding, bending
enzyme binding
nucleosomal DNA binding
cAMP response element binding
MH2 domain binding
MH1 domain binding
SMAD binding
5'-deoxyribose-5-phosphate lyase activity
C2H2 zinc finger domain binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P101361 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 877352 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 263793 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 557583 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 564023 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 11650 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 237091 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 480140 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 415693 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 748293 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 787701 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 714622 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 10049 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 464646 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 499399 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 437503 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 135012 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 867504 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 226650 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 428993 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 947182 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 350475 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 243559 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 116860 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 740521 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 606795 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 118082 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 333742 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 582510 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 431193 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 468111 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 12812 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 777042 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 937760 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 696114 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 768597 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 132788 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 265484 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 458718 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 621276 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 773873 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 918556 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 227462 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 264191 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 663856 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 813644 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 97208 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 942551 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 960346 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 650645 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 89213 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 165630 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 241682 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 78720 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 287505 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 697944 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 939075 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 768874 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 509961 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 250152 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 464945 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 144138 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 44989 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 475366 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 766512 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 491239 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 512066 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 937113 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 42291 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 921135 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 550466 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 135301 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 359373 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 104265 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 779214 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 206835 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 559121 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 445127 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 308619 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 487712 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 8452 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 663341 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 620042 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 749080 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 168127 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 601124 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 490709 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 944257 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 179836 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 478172 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 146580 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 84131 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 143426 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 68212 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 13501 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 130688 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 39439 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 169860 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 57603 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 1665 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 128099 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 35282 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 34443 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 127699 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 36009 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 136355 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 102320 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 105320 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P101361 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P101361 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P101361 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P101361 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 59346 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 73761 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 91659 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 97439 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 97784 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 60749 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 46994 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 63384 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 75540 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 33584 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 62292 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10940546 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10940546 | - | - |
| Rat Genome 230 2.0 Array | 1387635_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1387635_at | - | - |
| Affymetrix HT Rat Focus Array | 1387635_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1387635_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0700022071.rn.1 | TC0700002843.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0700022072.rn.1 | TC0700002843.rn.1 | RTA TC |
| Rat Expression Set 230 | 1387635_PM_at | - | - |
| Rat Expression Set 230 | 1387635_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10940546 | - | - |
| Rat Genome U34 Set | U89695_at | - | - |
| Rat Genome U34 Set | U89695_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21275612 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1349839 | - | - |
| RatRef-12 Expression BeadChip | ILMN_68775 | - | - |
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