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          • › Search Tool
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          • › Rn00583952_m1
          See other CAST GE Assays ›
          Gene Symbol:
          Cast
          Gene Name:
          calpastatin
          Gene Aliases:
          -
          Chromosome Location:
          Chr.2: 1451933 - 1561666 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00583952_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 284.00
          Your Price
          Online offer: 266.65
          266.65
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Cast
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001033715.1 NP_001028887.1 4 - 5 384 91
          NM_001033716.1 NP_001028888.1 4 - 5 384 91
          NM_053295.2 NP_445747.2 4 - 5 384 91
          XM_006231698.2 XP_006231760.1 4 - 5 792 91
          XM_006231699.2 XP_006231761.1 4 - 5 586 91
          GenBank mRNA AF346597.1 - 2 - 3 65 91
          AF346598.1 - 2 - 3 65 91
          BC070882.1 - 4 - 5 283 91
          BC091239.1 - 4 - 5 384 7324026 91
          DQ186624.1 - 4 - 5 578 91
          DQ186625.1 - 4 - 5 578 91
          DQ186626.1 - 4 - 5 578 91
          DQ186627.1 - 4 - 5 578 91
          X62520.1 - 2 - 3 60 91
          Y13587.1 - 2 - 3 77 91
          Y13588.1 - 2 - 3 77 91
          Y13589.1 - 2 - 3 77 91
          Y13590.1 - 2 - 3 77 91
          Y13591.1 - 2 - 3 91

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0200002475.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Recommended Assay Rattus norvegicus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Cast

          Panther Classification:

          Molecular Function -

          protein-binding activity modulator protease inhibitor

          Gene Ontology Categories:

          Function(s) Process(es)

          liver development
          egg activation
          brain development
          myoblast fusion
          aging
          negative regulation of peptidase activity
          negative regulation of endopeptidase activity
          organ regeneration
          regulation of protein catabolic process
          negative regulation of catalytic activity
          myoblast differentiation
          negative regulation of cell cycle arrest
          negative regulation of type B pancreatic cell apoptotic process
          protease binding
          protein binding
          calcium-dependent cysteine-type endopeptidase inhibitor activity
          poly(A) RNA binding

          MicroArray Probes:

          Agilent Affymetrix Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P040361 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P421539 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 606398 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 325256 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 390678 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 458010 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 741253 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 868280 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 561561 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 713944 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 760598 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 255076 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 502337 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 340915 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 697208 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 631987 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 312519 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 308302 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 411382 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 653906 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 822308 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 304470 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 417118 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 503441 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 777047 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 5608 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 328272 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 371977 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 698470 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 360987 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 787949 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 391560 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 194836 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 502435 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 969944 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 255628 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 212339 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 963684 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 148923 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 409641 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 639293 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 236949 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 499544 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 146467 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 96217 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 165972 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 339390 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 113003 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 221737 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 110981 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 55135 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 885977 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 182704 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 526963 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 966890 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 636368 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 233135 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 916948 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 439244 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 929665 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 471857 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 964279 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 281629 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 154806 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 9362 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 755928 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 456857 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 862558 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 31663 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 740503 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 558781 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 111071 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 1659 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 26011 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 45539 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 20924 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 82597 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 61342 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 119900 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 180635 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 81016 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 118113 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 131528 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 95886 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P421539 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P040361 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P040361 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P421539 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P421539 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P040361 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P421547 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P421539 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P412159 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 33504 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 82979 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 104857 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 40950 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 6482 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 35844 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 57354 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10820016 - -
          Affymetrix Rat Gene 1.0 ST Array 10820034 - -
          Affymetrix Rat Gene 1.0 ST Array 10820029 - -
          Affymetrix Rat Gene 1.0 ST Array 10820041 - -
          Affymetrix Rat Gene 1.0 ST Array 10820030 - -
          Affymetrix Rat Gene 1.0 ST Array 10820015 - -
          Affymetrix Rat Gene 1.0 ST Array 10820026 - -
          Affymetrix Rat Gene 1.0 ST Array 10820039 - -
          Affymetrix Rat Gene 1.0 ST Array 10820032 - -
          Affymetrix Rat Gene 1.0 ST Array 10820025 - -
          Affymetrix Rat Gene 1.0 ST Array 10820023 - -
          Affymetrix Rat Gene 1.0 ST Array 10820019 - -
          Affymetrix Rat Gene 1.0 ST Array 10820040 - -
          Affymetrix Rat Gene 1.0 ST Array 10820038 - -
          Affymetrix Rat Gene 1.0 ST Array 10820024 - -
          Affymetrix Rat Gene 1.0 ST Array 10820020 - -
          Affymetrix Rat Gene 1.0 ST Array 10820028 - -
          Affymetrix Rat Gene 1.0 ST Array 10820036 - -
          Affymetrix Rat Gene 1.0 ST Array 10820042 - -
          Affymetrix Rat Gene 1.0 ST Array 10820017 - -
          Affymetrix Rat Gene 1.0 ST Array 10820037 - -
          Affymetrix Rat Gene 1.0 ST Array 10820022 - -
          Affymetrix Rat Gene 1.0 ST Array 10820033 - -
          Affymetrix Rat Gene 1.0 ST Array 10820045 - -
          Affymetrix Rat Gene 1.0 ST Array 10820018 - -
          Affymetrix Rat Gene 1.0 ST Array 10820035 - -
          Affymetrix Rat Gene 1.0 ST Array 10820046 - -
          Affymetrix Rat Gene 1.0 ST Array 10820044 - -
          Affymetrix Rat Gene 1.0 ST Array 10820021 - -
          Affymetrix Rat Gene 1.1 ST Array 10820014 - -
          Rat Genome 230 2.0 Array 1369754_a_at - -
          Rat Genome 230 2.0 Array 1371173_a_at - -
          Rat Genome 230 2.0 Array 1373466_at - -
          Rat Genome 230 2.0 Array 1373466_PM_at - -
          Rat Genome 230 2.0 Array 1369754_PM_a_at - -
          Rat Genome 230 2.0 Array 1371173_PM_a_at - -
          Affymetrix HT Rat Focus Array 1369754_PM_a_at - -
          Affymetrix HT Rat Focus Array 1373466_PM_at - -
          Affymetrix HT Rat Focus Array 1369754_a_at - -
          Affymetrix HT Rat Focus Array 1371173_PM_a_at - -
          Affymetrix HT Rat Focus Array 1373466_at - -
          Affymetrix HT Rat Focus Array 1371173_a_at - -
          Affymetrix Rat Clariom S Assay PSR0200017425.rn.1 TC0200002475.rn.1 RTA TC
          Rat Expression Set 230 1373466_PM_at - -
          Rat Expression Set 230 1369754_a_at - -
          Rat Expression Set 230 1371173_PM_a_at - -
          Rat Expression Set 230 1373466_at - -
          Rat Expression Set 230 1371173_a_at - -
          Rat Expression Set 230 1369754_PM_a_at - -
          Affymetrix Rat Gene 1.0 ST Array 10820014 - -
          Rat Genome U34 Set X56729mRNA_g_at - -
          Rat Genome U34 Set Y13590_at - -
          Rat Genome U34 Set X56729mRNA_at - -
          Rat Genome U34 Set rc_AA875089_at - -
          Rat Genome U34 Set Y13591_s_at - -
          Rat Genome U34 Set rc_AA946474_at - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1371155 - -
          RatRef-12 Expression BeadChip ILMN_62831 - -

          Back To Top

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