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          • Home
          • › Search Tool
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          • › Rn00584155_m1
          See other BHLHE40 GE Assays ›
          Gene Symbol:
          Bhlhe40
          Gene Name:
          basic helix-loop-helix family, member e40
          Gene Aliases:
          Bhlhb2, Dec1, SHARP-2, Sharp2, Stra13, Stra14
          Chromosome Location:
          Chr.4: 140703619 - 140709319 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00584155_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 284.00
          Your Price
          Online offer: 266.65
          266.65
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Bhlhe40
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_053328.1 NP_445780.1 4 - 5 702 107
          GenBank mRNA AF009330.1 - 4 - 5 702 107

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0400001537.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 3' Most Recommended Assay Rattus norvegicus Rat Hypoxia Panel 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Bhlhe40

          Panther Classification:

          Molecular Function -

          basic helix-loop-helix transcription factor

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          transcription, DNA-templated
          transcription from RNA polymerase II promoter
          nervous system development
          circadian rhythm
          response to light stimulus
          entrainment of circadian clock
          circadian regulation of gene expression
          entrainment of circadian clock by photoperiod
          negative regulation of sequence-specific DNA binding transcription factor activity
          negative regulation of transcription, DNA-templated
          regulation of neuronal synaptic plasticity
          RNA polymerase II transcription factor activity, sequence-specific DNA binding
          transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
          RNA polymerase II activating transcription factor binding
          transcriptional repressor activity, RNA polymerase II transcription factor binding
          DNA binding
          transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
          transcription corepressor activity
          protein domain specific binding
          protein homodimerization activity
          bHLH transcription factor binding
          MRF binding
          protein heterodimerization activity
          protein dimerization activity
          E-box binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P12768 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 413143 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 637999 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 20816 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 498653 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 111720 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P12768 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P12768 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P12768 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P12768 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 87150 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10857614 - -
          Affymetrix Rat Gene 1.0 ST Array 10857615 - -
          Affymetrix Rat Gene 1.0 ST Array 10857613 - -
          Affymetrix Rat Gene 1.0 ST Array 10857612 - -
          Affymetrix Rat Gene 1.0 ST Array 10857611 - -
          Affymetrix Rat Gene 1.1 ST Array 10857610 - -
          Rat Genome 230 2.0 Array 1379483_at - -
          Rat Genome 230 2.0 Array 1369415_PM_at - -
          Rat Genome 230 2.0 Array 1379483_PM_at - -
          Rat Genome 230 2.0 Array 1369415_at - -
          Affymetrix HT Rat Focus Array 1369415_at - -
          Affymetrix HT Rat Focus Array 1369415_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0400010750.rn.1 TC0400001537.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400010751.rn.1 TC0400001537.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400010752.rn.1 TC0400001537.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400010747.rn.1 TC0400001537.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400010748.rn.1 TC0400001537.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400010746.rn.1 TC0400001537.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400010745.rn.1 TC0400001537.rn.1 RTA TC
          Rat Expression Set 230 1369415_PM_at - -
          Rat Expression Set 230 1369415_at - -
          Rat Expression Set 230 1379483_at - -
          Rat Expression Set 230 1379483_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10857610 - -
          Rat Genome U34 Set AF009330_at - -
          Rat Genome U34 Set rc_AI235991_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22013413 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1374180 - -
          RatRef-12 Expression BeadChip ILMN_63976 - -

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