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- Gene Symbol:
-
Trim9 - Gene Name:
- tripartite motif-containing 9
- Gene Aliases:
- -
- Chromosome Location:
- Chr.6: 92660026 - 92760059 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Trim9 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_130420.1 | NP_569104.1 | 3 - 4 | 1198 | 78 | |
| XM_008764691.1 | XP_008762913.1 | 3 - 4 | 1239 | 78 | ||
| XM_008764692.1 | XP_008762914.1 | 3 - 4 | 1239 | 78 | ||
| XM_008764693.1 | XP_008762915.1 | 3 - 4 | 1239 | 78 | ||
| XM_008764694.1 | XP_008762916.1 | 3 - 4 | 1239 | 78 | ||
| GenBank mRNA | AF350422.1 | - | 3 - 4 | 1198 | 78 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0600002615.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
synaptic vesicle exocytosis
protein ubiquitination
negative regulation of SNARE complex assembly
proteasome-mediated ubiquitin-dependent protein catabolic process
negative regulation of calcium ion-dependent exocytosis
SNARE binding
ubiquitin-protein transferase activity
zinc ion binding
ligase activity
protein homodimerization activity
synaptic vesicle exocytosis
protein ubiquitination
negative regulation of SNARE complex assembly
proteasome-mediated ubiquitin-dependent protein catabolic process
negative regulation of calcium ion-dependent exocytosis
SNARE binding
ubiquitin-protein transferase activity
zinc ion binding
ligase activity
protein homodimerization activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P135006 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 854091 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 392035 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 285152 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 159096 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 917422 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 733381 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 463406 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 181818 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 36255 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 854475 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 586668 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 88034 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 193967 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 93185 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 386832 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 768854 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 804768 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 756882 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 781368 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 831796 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 206030 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 748203 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 379014 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 92656 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 745806 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 35081 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 912885 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 459288 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 823360 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 333370 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 78080 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 563609 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 972892 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 910978 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 13947 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 973996 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 284441 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 766437 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 523552 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 919513 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 388935 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 448698 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 466622 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 413476 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 774047 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 925298 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 149167 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 525564 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 702636 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 924784 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 301207 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 115595 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 363928 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 534345 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 694181 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 898856 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 214096 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 967138 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 564586 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 229844 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 467793 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 186801 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 210986 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 793176 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 60503 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 178162 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 125283 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 413473 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 336879 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 35265 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 633540 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 325101 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 928700 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 125359 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 24667 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 31865 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 47430 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 119670 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 147997 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 86204 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 19792 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 108175 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 116050 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 91932 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 165269 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 8050 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P135006 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P135006 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P135006 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P135006 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 81447 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 38278 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 28995 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 57223 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 58129 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 44286 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 29457 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10890465 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10890464 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10890479 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10890472 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10890477 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10890478 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10890467 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10890474 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10890466 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10890473 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10890476 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10890475 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10890463 | - | - |
| Rat Genome 230 2.0 Array | 1383861_at | - | - |
| Rat Genome 230 2.0 Array | 1387486_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1383861_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1385140_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1387486_at | - | - |
| Rat Genome 230 2.0 Array | 1385140_at | - | - |
| Affymetrix HT Rat Focus Array | 1387486_at | - | - |
| Affymetrix HT Rat Focus Array | 1385140_at | - | - |
| Affymetrix HT Rat Focus Array | 1385140_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1387486_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0600018624.rn.1 | TC0600002615.rn.1 | RTA TC |
| Rat Expression Set 230 | 1387486_PM_at | - | - |
| Rat Expression Set 230 | 1387486_at | - | - |
| Rat Expression Set 230 | 1385140_PM_at | - | - |
| Rat Expression Set 230 | 1385140_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10890463 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21365766 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1358697 | - | - |
| RatRef-12 Expression BeadChip | ILMN_53522 | - | - |
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