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          • › Search Tool
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          • › Rn00595845_m1
          See other LHX1 GE Assays ›
          Gene Symbol:
          Lhx1
          Gene Name:
          LIM homeobox 1
          Gene Aliases:
          -
          Chromosome Location:
          Chr.10: 71843991 - 71849293 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00595845_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 2,694.00
          Your Price
          Online offer:
          2694.0
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Lhx1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_145880.3 NP_665887.3 1 - 2 770 64
          GenBank mRNA S71523.1 - 1 - 2 770 64

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1000003444.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Lhx1

          Panther Classification:

          Molecular Function -

          helix-turn-helix transcription factor homeodomain transcription factor DNA-binding transcription factor gene-specific transcriptional regulator

          Gene Ontology Categories:

          Function(s) Process(es)

          urogenital system development
          ureteric bud development
          branching involved in ureteric bud morphogenesis
          gastrulation with mouth forming second
          ectoderm formation
          endoderm formation
          kidney development
          transcription from RNA polymerase II promoter
          cell-cell signaling
          pattern specification process
          motor neuron axon guidance
          anatomical structure morphogenesis
          post-embryonic development
          embryonic pattern specification
          anterior/posterior axis specification
          anterior/posterior pattern specification
          dorsal/ventral pattern formation
          regulation of gene expression
          retina layer formation
          ventral spinal cord development
          spinal cord association neuron differentiation
          telencephalon development
          cerebellum development
          cerebellar Purkinje cell differentiation
          forebrain regionalization
          cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation
          somite rostral/caudal axis specification
          metanephric part of ureteric bud development
          oviduct epithelium development
          uterine epithelium development
          nephric duct elongation
          horizontal cell localization
          positive regulation of embryonic development
          cellular response to fibroblast growth factor stimulus
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          anatomical structure formation involved in morphogenesis
          embryonic viscerocranium morphogenesis
          pronephros development
          embryonic retina morphogenesis in camera-type eye
          uterus development
          oviduct development
          cervix development
          vagina development
          head development
          epithelium development
          paramesonephric duct development
          renal system development
          comma-shaped body morphogenesis
          S-shaped body morphogenesis
          renal vesicle morphogenesis
          mesonephric tubule development
          mesonephric duct development
          nephric duct morphogenesis
          metanephric glomerulus development
          metanephric comma-shaped body morphogenesis
          metanephric renal vesicle morphogenesis
          metanephric S-shaped body morphogenesis
          primitive streak formation
          positive regulation of branching involved in ureteric bud morphogenesis
          lateral motor column neuron migration
          positive regulation of gastrulation
          positive regulation of anterior head development
          positive regulation of nephron tubule epithelial cell differentiation
          transcription factor activity, sequence-specific DNA binding
          zinc ion binding
          sequence-specific DNA binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P006285 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 247276 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 275883 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 512795 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 57424 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P006285 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P006285 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P006285 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P301679 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 22769 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10745746 - -
          Affymetrix Rat Gene 1.0 ST Array 10745750 - -
          Affymetrix Rat Gene 1.0 ST Array 10745747 - -
          Affymetrix Rat Gene 1.0 ST Array 10745748 - -
          Affymetrix Rat Gene 1.0 ST Array 10745749 - -
          Affymetrix Rat Gene 1.1 ST Array 10745745 - -
          Rat Genome 230 2.0 Array 1389982_PM_at - -
          Rat Genome 230 2.0 Array 1389982_at - -
          Rat Genome 230 2.0 Array 1377206_PM_at - -
          Rat Genome 230 2.0 Array 1377206_at - -
          Affymetrix HT Rat Focus Array 1389982_PM_at - -
          Affymetrix HT Rat Focus Array 1377206_PM_at - -
          Affymetrix HT Rat Focus Array 1389982_at - -
          Affymetrix HT Rat Focus Array 1377206_at - -
          Affymetrix Rat Clariom S Assay PSR1000030708.rn.1 TC1000003444.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1000030707.rn.1 TC1000003444.rn.1 RTA TC
          Rat Expression Set 230 1389982_PM_at - -
          Rat Expression Set 230 1377206_at - -
          Rat Expression Set 230 1389982_at - -
          Rat Expression Set 230 1377206_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10745745 - -
          Rat Genome U34 Set S71523_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21685582 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1356640 - -
          RatRef-12 Expression BeadChip ILMN_49373 - -

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